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translation

9860 relationships annotated with this phrase. Showing first 500 of 9860.
Source entity Relationship Target entity Species
fer-4 mutant blocked RALF1-triggered (CAR10, AT2G01540) mRNA translation Arabidopsis thaliana
(ATRALF1, RALF1, RALFL1, AT1G02900) promoted mRNA translation of (CAR10, AT2G01540) Arabidopsis thaliana
Arabidopsis (RPL10, RPL10A, SAC52, uL16z, AT1G14320) proteins are interchangeable Arabidopsis thaliana
fer-4 mutant blocked RALF1-triggered (AtC2, AtGAP1, C2, CAR4, AT3G17980) mRNA translation Arabidopsis thaliana
premature stop codon mutation causes premature termination translation resulting in truncated protein Arabidopsis thaliana
(RPL10B, uL16y, AT1G26910) was not identified in 60S ribosomal subunit Arabidopsis thaliana
YFP transcript showed no inhibition in the presence of YFP-HSC70.1 protein Arabidopsis thaliana
mutations in (ATRAD51C, RAD51C, AT2G45280) result in translational frameshifts and premature terminations of RAD51C.3 protein Oryza sativa
three AtRPL10 proteins are constituents of cytosolic ribosomes Arabidopsis thaliana
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) connects to (CUM2, EIF4G, AT3G60240)
mutations in Osalkbh5-1 and Osalkbh5-2 caused frame shifts and premature translational termination Oryza sativa L. ssp. japonica
knockout of (ATHSP101, HOT1, HSP101, AT1G74310) leads to decreased (ATNACK2, NACK2, TES, AT3G43210) of ribosomal protein mRNAs compared with WT Arabidopsis thaliana
(RPL10B, uL16y, AT1G26910) is possibly required for translation only under certain environmental conditions Arabidopsis thaliana
most indels resulted in frame shifts introducing premature stop codons Marchantia polymorpha
translation initiation plays critical role in translational control
mammalian RACK1 protein complements S. cerevisiae cross pathway control2/rack1 mutants Saccharomyces cerevisiae; Mammalia
(RPL10B, uL16y, AT1G26910) is possibly essential for translation of specific transcripts during plant development Arabidopsis thaliana
lower heterogeneity of ribosomes allows only specific and necessary mRNAs to be translated Arabidopsis thaliana
plants contain (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) and (EIF(ISO)4E, EIF4E2, eIFiso4E, LSP, LSP1, AT5G35620)
phototrophs have developed protein synthesis
(RPL10B, uL16y, AT1G26910) may be involved in translation of specific chloroplast proteins Arabidopsis thaliana
(EIF4E1B, AT1G29550) mRNA associates with polysomes Arabidopsis thaliana
gl3–sst (SIM, AT5G04470) trichomes contain genes encoding ribosomal proteins Arabidopsis thaliana
Ribosomal protein S2 identified for the first time in this study Synechocystis sp. PCC 6803
ribosomal protein L1 family protein is chloroplast phosphoprotein Arabidopsis thaliana
full-length, constitutive splicing (CS) mRNAs for OsNF-YA4, OsWRKY55, and OsCIPK33 indicate that they are translated Oryza sativa
high levels of (RPL10, RPL10A, SAC52, uL16z, AT1G14320) are necessary for translation under UV-B stress Arabidopsis thaliana
three AtRPL10 proteins complement yeast mutant in (RPL10, RPL10A, SAC52, uL16z, AT1G14320) Arabidopsis thaliana; Saccharomyces cerevisiae
Inosine in RNA leads to mistranslation
CERES interacts with (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040)
Arabidopsis RACK1 proteins complementing yeast show slower growth rates compared with endogenous yeast protein Arabidopsis thaliana; Saccharomyces cerevisiae
RALF1-FER promotes protein synthesis
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) encodes translation initiation factor (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) Arabidopsis thaliana
translation process may induce changes in RNA structures Arabidopsis thaliana
(RPL10B, uL16y, AT1G26910) may fulfill function of yeast (RPL10, RPL10A, SAC52, uL16z, AT1G14320) Arabidopsis thaliana; Saccharomyces cerevisiae
(CUM2, EIF4G, AT3G60240) interacts with eIF4A
AtRPL10 proteins participate in translation Arabidopsis thaliana
(RPL10C, SAG24, uL16x, AT1G66580) could participate with RPL10A in general translation Arabidopsis thaliana
structure in coding regions is a major determinant of translation efficiency Escherichia coli
Ribosomal protein L24 identified for the first time in this study Synechocystis sp. PCC 6803
eIF4F is composed of DEAD-box RNA helicase eIF4A
many IR transcripts are actively translated
Arabidopsis (RPL10, RPL10A, SAC52, uL16z, AT1G14320) proteins are functionally equivalent to (RPL10, RPL10A, SAC52, uL16z, AT1G14320) from S. cerevisiae Arabidopsis thaliana; Saccharomyces cerevisiae
HSC70.1 protein may bind to HSC70.1 mRNAs at ribosomes Arabidopsis thaliana
transcriptome variation does not necessarily reflect translational status
maize and human RPL10s are incorporated into yeast ribosome Saccharomyces cerevisiae; Zea mays; Homo sapiens
amino acid changes between Arabidopsis and S. cerevisiae (RPL10, RPL10A, SAC52, uL16z, AT1G14320) sequences may be cause of growth deficiencies in complemented yeast Arabidopsis thaliana; Saccharomyces cerevisiae
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) binding proteins (4E-BPs) inhibit binding of (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) to (CUM2, EIF4G, AT3G60240)
transgenic plants expressing each AtRPL10 gene fused to GFP show three AtRPL10 proteins are mainly localized in cytosol Arabidopsis thaliana
4E-BPs inhibition of eIF4E-eIF4G binding occurs by competitive binding of 4E-BPs to (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040)
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) interacting protein (GEMIN2, AT1G54380) was identified as (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) interacting protein Arabidopsis thaliana
translation of RAD51D.2 may not be affected by mutations in (ATRAD51D, RAD51D, SSN1, AT1G07745) Oryza sativa
YFP-HSC70.1 transcript translation could only be detected in the presence of high amounts of bivalent Mg2+ Arabidopsis thaliana
aminoacyl-tRNA ligation is essential step for translation and amino acid dynamics
ribosomal fractions from EDTA-treated seedlings are much less associated with all transcripts, especially the heavy polysome (HP) fraction Oryza sativa
wild-type Arabidopsis grown at 10°C induces expression of translation initiation or elongation factors Arabidopsis thaliana
association of Arabidopsis (REIL1, AT4G31420) protein with translating ribosome fractions may point toward additional role of Arabidopsis REIL for cytosolic translation process or subunit recycling Arabidopsis thaliana
cytosolic ribosomes contains large ribosomal subunit (60S (AtGGPPS11, AtGGPS11, AtLSU, GGPPS11, GGPS1, IDS11, LSU, AT4G36810) )
Complex of (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) (CUM2, EIF4G, AT3G60240) challenged with additional showed no significant change in translational activity Arabidopsis thaliana
eukaryotic cytoplasmic ribosomes comprises 60S ribosomal subunit
aminoacyl-tRNA synthetases (AARSs) catalyze ligation of amino acids and their cognate tRNA
translational activity of ribosomes in cytoplasm could be directly and dynamically fine-tuned by various environmental signals Oryza sativa
Ribosomal protein L28 identified for the first time in this study Synechocystis sp. PCC 6803
(GUN1, AT2G31400) translation is not stimulated by lincomycin treatment Arabidopsis thaliana
eukaryotic cytoplasmic ribosomes comprises 40S ribosomal subunit
mobile mRNAs overrepresented in translation biological process Nicotiana benthamiana
Ribosomal protein S2 is TrxB target Synechocystis sp. PCC 6803
cry9Aa2 leader is known to yield high-level protein expression from the downstream ORF
(GUN1, AT2G31400) mRNA is actively translated under unstressed conditions Arabidopsis thaliana
41 transcripts include (SAUR62, AT1G29430) Arabidopsis thaliana
41 transcripts include (SAUR75, AT5G27780) Arabidopsis thaliana
cytoplasmic mRNA translation is well investigated
Ribosomal protein L28 is TrxB target Synechocystis sp. PCC 6803
ribosomal protein (RPL24, SVR8, uL24c, AT5G54600) may be hypothesized to affect proline accumulation at translational level Arabidopsis thaliana
GUN1-GFP transcripts accumulate in gradient fractions 4 and 5 Arabidopsis thaliana
environmental signals represent regulatory layer affecting activity of ribosomes Oryza sativa
fer-4 mutant causes decrease in intensity of polysomal fractions
multiple m6A modifications are detrimental for translation
pseudouridylation and deamination alter genetic code
Complex of (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) (CUM2, EIF4G, AT3G60240) challenged with additional (EIF4E1B, AT1G29550) showed no significant change in translational activity Arabidopsis thaliana
ribosome can translate downstream ORF
translational machinery is absent in sieve elements
large ribosomal subunit (60S (AtGGPPS11, AtGGPS11, AtLSU, GGPPS11, GGPS1, IDS11, LSU, AT4G36810) ) contains ribosomal proteins (RPs)
low TC levels under high-B conditions suppresses translation of the main ORF Arabidopsis thaliana
(GUN1, AT2G31400) translation is not stimulated by norflurazon treatment Arabidopsis thaliana
Ribosomal protein S10 identified for the first time in this study Synechocystis sp. PCC 6803
binding of (RPL10, RPL10A, SAC52, uL16z, AT1G14320) into the ribosomes would be different in plants Arabidopsis thaliana
60S ribosomal subunit contains ribosomal proteins
RPL27aC and (RPL27A, RPL27AB, uL15y, AT1G23290) act redundantly Arabidopsis thaliana
(RPL4, uL4y, AT5G02870) (ribosomal protein L4) is chloroplast phosphoprotein Arabidopsis thaliana
40S ribosomal subunit contains ribosomal proteins
highest expressed genes in gl3–sst (SIM, AT5G04470) trichomes encode ribosomal components and translation-related proteins Arabidopsis thaliana
ScRPL10 contains amino acids essential for viability Saccharomyces cerevisiae
shorter transcript from (EMB2279, EMB88, SOT5, AT1G30610) encodes 978-amino acid peptide with 11 PPR motifs Arabidopsis thaliana
plant ribosomes are responsible for protein synthesis
40S ribosomal subunit contains 18S ribosomal RNA (rRNA)
cytoplasmic ribosomal proteins are encoded by ribosomal protein genes Arabidopsis thaliana
Ribosomal protein S10 is TrxB target Synechocystis sp. PCC 6803
YFP(s)::HSC70.1 fusion transcript does not produce HSC70.1 protein Arabidopsis thaliana
regulation of translation initiation in plants differs from regulation in mammalian and yeast
(RPL10, RPL10A, SAC52, uL16z, AT1G14320) is integral component of the large subunit of eukaryotic ribosomes
plastid casein kinase 2 (pCK2) targets proteins involved in translation Arabidopsis thaliana
AI cell shares enrichment of terms with SO cells Hieracium praealtum
reduced tRNA set in plastids is optimized for decoding by wobbling and superwobbling
40S and 60S ribosomal subunits comprised in proteins belonging to the categories RNA binding, translation, and response to stress Arabidopsis thaliana
translation elongation factor 1-alpha protein or closely related protein was found to be highly abundant in trichomes Arabidopsis thaliana
cycloheximide inhibits protein synthesis Arabidopsis thaliana
synthetic RNAs modified specifically at the initiation codon showed no significant effects on translatability in the presence of kanamycin Triticum aestivum
translation elongation factor (ATRAB8D, ATRABE1B, RAB8D, RABE1b, SVR11, AT4G20360) is probably involved in protein synthesis Arabidopsis thaliana
data suggest small, yet statistically significant, increases in levels of ribosome-associated m6A mRNAs Brassica oleracea var. botrytis
aminoacyl–tRNA synthetases are essential for translation in both endosymbiotic organelles
mRNAs using poly(A) sites within protein-coding regions lack translation termination codons
a single modification in the start codon may enhance translatability of organellar transcripts
translation initiation is rate-limiting step of translation
alternative translation starting site on exon-3 gives protein of 290 aa missing first 96 aa Triticum aestivum
similar intensities of His-tagged polypeptides were obtained in non-modified (control) and m6A-AUG modified transcripts Arabidopsis thaliana; Brassica oleracea var. botrytis
CERES has structure consisting of multiple LRR domains and a 4E-BS
scanning mechanism of translation would be applicable to plastid gene constructs incorporated in nucleus
comparison of mRNA pulled down with ribosome to total mRNA level calculates translation efficiency (TE)
second ORF will not be translated on 80S ribosomes
translation of (ATP1, ATMG01190) (MATR, ATMG00520) or (NAD4, ATMG00580) was not observed when transcripts were synthesized in the presence of 100% m6A/A ratio Arabidopsis thaliana; Brassica oleracea var. botrytis
addition of kanamycin to the reaction significantly reduced translation of in vitro transcribed m6A-RNAs by organellar ribosomes Arabidopsis thaliana; Brassica oleracea var. botrytis
translational skip of the ribosome leads to release of the nascent polypeptide chain
translation of (ATP1, ATMG01190) (MATR, ATMG00520) and (NAD4, ATMG00580) was reduced in the presence of CYCH Arabidopsis thaliana; Brassica oleracea var. botrytis
translation of m6AUG RNA fragments was assayed in the presence of kanamycin Arabidopsis thaliana; Brassica oleracea var. botrytis
N6-methyladenosine (m6A) is not expected to rewire genetic code for translation
Excessive m6A modifications were found to be detrimental for translation of m6A-modified transcripts Triticum aestivum
transcribed conserved noncoding sequences (CNSs) encode short translation products
cycloheximide (CycH) blocks translation in eukaryotic ribosomes Arabidopsis thaliana; Brassica oleracea var. botrytis
ENOD40 transcript has been proposed to be translated into small peptide
TNT ® wheat germ extract (WGE) system was used to analyze translation efficiencies of m6A modified (ATP1, ATMG01190) (NAD4, ATMG00580) and (MATR, ATMG00520) transcripts Arabidopsis thaliana; Brassica oleracea var. botrytis
translation of (ATP1, ATMG01190) (MATR, ATMG00520) and (NAD4, ATMG00580) was reduced by about 50% when RNAs were transcribed at 10% m6A/A ratio Arabidopsis thaliana; Brassica oleracea var. botrytis
translation initiation is major site of control of translation
stress has overall suppressing effect on translation
mitochondria were solubilized and processed for polysome fractionation Brassica oleracea var. botrytis
application of ST on Populus tremula leaf buds showed that captured information was specific for gene ontology terms related to translation, photosynthesis, and several categories involved in cell division, differentiation, and genome organization, including cell morphogenesis Populus tremula
ribosome footprint of Arabidopsis mitochondria did not reveal any new translated mtORFs in Arabidopsis mitochondria Arabidopsis thaliana
translational coupling is impact of protein accumulation from first ORF on protein accumulation from second ORF
suba1 (GLES1, TGD5, AT1G27695) transcript with unexcised intron can be translated to produce largely truncated and dysfunctional (GLES1, TGD5, AT1G27695) polypeptide Arabidopsis thaliana
Ribo-seq is used to obtain translation profiles at codon resolution Arabidopsis thaliana
IRES-containing cellular mRNAs contribute to maintenance of translation
Potassium (K+) plays a role in protein synthesis
trap provides a readout of transcript isoforms associated with ribosomes
(ATRPS13A, PFL2, RPS13, RPS13A, uS15y, AT4G00100) is downregulated in (54CP, CPSRP54, FFC, SRP54CP, AT5G03940) mutants Phaeodactylum tricornutum
118 sequences encode 3 ribosomal proteins
AUG-stops do not involve peptide synthesis Arabidopsis thaliana
mobilization of protein bodies in the endosperm cap delivers amino acids for translation Arabidopsis thaliana; Lepidium sativum
mitoribosomes may confer the ability to more efficiently translate specific subpopulations of mRNA such as m6A mtRNAs modified specifically at the initiation codons Arabidopsis thaliana
internal ribosomal entry site (IRES) from a plant virus inserted between two genes in a polycistronic construct
clones encoding rRNA or ribosomal proteins indicate increase in translation during germination
m6A can enhance mRNA translation efficiency
118 sequences encode 2 translation factors
CERES under physiological conditions drives translational initiation
high ectopic expression of CERES from viral constructs during TuMV-UK1 infection could modify translation of specific sets of mRNAs in the host cell
COMATOSE (cts-1) mutant cannot translate accumulated germination-related RNAs
unwinding of (ACS2, AT-ACC2, AT1G01480) mRNA leads to increased translational efficiency
mutations in essential ribosomal components interfere with protein synthesis
uORFs act as decoy from principal ORF
uORFs potentially cause premature termination
high-temperature stress causes plant cells to shut down translation machinery
(SPPA, SPPA1, AT1G73990) -320 mutant produces abnormal SPPA mRNA but lacks detectable (SPPA, SPPA1, AT1G73990) protein Arabidopsis thaliana
(GGT3, GGT4, AT4G29210) transcripts may originate functional protein from (GGT3, GGT4, AT4G29210) protein Arabidopsis thaliana
GRPs are involved in post-transcriptional gene regulation
phosphorylation of ribosomal P-proteins leads to increased (selective) translation activity
UTRs influence translation efficiency
Elongation factor 1-expressed participates in translation Citrus sinensis
TRV:DER(3) lines contained high levels of rRNA precursors with substantially reduced amounts of the mature rRNAs in the polysome fractions Nicotiana benthamiana
truncated transcripts could be translated into truncated but partially functional proteins
Calreticulin (CRT) plays a crucial role in protein synthesis
MP mRNA is detected in heavy polysome fraction Arabidopsis thaliana
intron retention cannot affect protein frame Oryza sativa
partial inhibition of translation may be caused by increased length of the 5′-UTR
AcMST1 predicted open reading frame translates into polypeptide of 496 amino acids Ananas comosus
rabbit P50 protein inhibits translation
ple-6 mutation (CAA to TAA) introduces stop codon Arabidopsis thaliana
polysomal loading of chloroplast-encoded mRNAs, (RBCL, ATCG00490) (PSBD, ATCG00270) and (PSBA, ATCG00020) was examined using RNA gel blot analyses with the corresponding probes Nicotiana benthamiana
full-length, constitutive splicing (CS) mRNAs for OsNF-YA4, OsWRKY55, and OsCIPK33 are mainly associated with heavy polysome (HP) fraction Oryza sativa
(ATRALF1, RALF1, RALFL1, AT1G02900) promoted mRNA translation of (CAR9, AT1G70790) Arabidopsis thaliana
(RPL10C, SAG24, uL16x, AT1G66580) is component of 60S ribosomal subunit Arabidopsis thaliana
recruitment of mRNAs to ribosome is mediated by translation initiation factor 4 (eIF4)
mutations in (ATRAD51D, RAD51D, SSN1, AT1G07745) cause frameshifts and early translation terminations of RAD51D.1 protein Oryza sativa
CRYs exhibit dark activity regulating translatome (1263 genes) Arabidopsis thaliana
(RPL10B, uL16y, AT1G26910) is possibly constituent of ribosomes Arabidopsis thaliana
OsNF-YA4-IR1 and OsWRKY55-IR isoforms are translated into proteins in rice cells Oryza sativa
polysome profiling captures dynamics of translating intron-containing mRNAs Oryza sativa L.
fer-4 mutant blocked RALF1-triggered (CAR9, AT1G70790) mRNA translation Arabidopsis thaliana
OsCIPK33-IR isoform appears equally distributed across all ribosomal fractions Oryza sativa
(EIF(ISO)4E, EIF4E2, eIFiso4E, LSP, LSP1, AT5G35620) pairs with eIFiso4G
RECEPTOR OF ACTIVATED C KINASE 1 (RACK1) is core component of eukaryotic 40S ribosomal subunit
archesporial (AR) cells are enriched for transcripts encoding ribosomal genes and translation initiation and elongation factors Zea mays
pre-rRNA processing affects protein translation
pGW11 (SOT1-rrn23) construct does not lead to translatable eGFP mRNA Nicotiana tabacum
Arabidopsis RACK1 proteins are components of 40S ribosomal subunit Arabidopsis thaliana
complemented mutants with maize and human RPL10s show decreased growth rate growth rate Saccharomyces cerevisiae
association of chloroplast RNAs with ribosomes was examined in NbDER-deficient chloroplasts Nicotiana benthamiana
large ribosomal subunit is required for polypeptide synthesis
ple-6 mutation infers truncated protein of 57 amino acids Arabidopsis thaliana
six proteins changed by exogenous application of glycine betaine (GB) include cytoplasmic elongation factor Tu (cEF-TuB) Solanum lycopersicum
gene lists for altered polysome state or transcript level include very few initiation or elongation factors aside from eIF3h Arabidopsis thaliana
P34 participates in mRNA 3'-end processing Spinacia oleracea
stop codon at residue 670 in Tab 1 would give rise to truncated product of 69 000 kDa Chlamydomonas reinhardtii
sRNAs inserted between neo and egfp functioning as alternative IEEs should increase production of protein from downstream cistron (egfp) Nicotiana tabacum
bacterial cpGTPases are associated with RNA/ribosome binding function
ple-5 mutation infers truncated protein of 377 amino acids Arabidopsis thaliana
mRNAs encoding essential translation machinery components found to be mobile mRNAs Nicotiana benthamiana
translatomes of in vivo-grown Arabidopsis thaliana pollen tubes revealed enrichment of 41 transcripts Arabidopsis thaliana
eIF2α enhances multifactor complex formation Triticum aestivum; Arabidopsis thaliana
eIF4B enhances multifactor complex formation Triticum aestivum; Arabidopsis thaliana
P36 participates in guanine nucleotide exchange Triticum aestivum
shortest splicing isoform (mRNA1) is only isoform able to encode active (At-RS31, ATRSP31, RS31, RSP31, AT3G61860) protein
ribosomal protein S6 family protein is chloroplast phosphoprotein Arabidopsis thaliana
GUN1-GFP mRNA is translationally inactive in gradient fractions 4 and 5 Arabidopsis thaliana
small ribosomal subunit (40S (AtSSU, GGPPS12, GGR, SSU, AT4G38460) ) contains 18S ribosomal RNA (rRNA)
trnR (ACG) (TRNN, ATMG00380) (GUU) orf75 region is among main (PAS2, PEP, PEPINO, AT5G10480) targets in the light
(AtCSP1, CSDP1, CSP1, AT4G36020) overexpression did not alter global protein synthesis Arabidopsis thaliana
bringing together two distantly located halves of the ribosome-binding site generates translatable mRNA
eIF3h may play additional roles in translation initiation or beyond Arabidopsis thaliana
polysome profile of (PSAB, ATCG00340) mRNA in the tab 1-F15 mutant displays shift towards monosome peak Chlamydomonas reinhardtii
OsNF-YA4-IR1 and OsWRKY55-IR transcripts may produce a truncated protein Oryza sativa
translation of full-length mRNA (L) results mainly in CDKG1L Arabidopsis thaliana
homologous sequences in Tripsacum dactyloides lack start codon Tripsacum dactyloides
polysome assays show translation of (AthCF1beta, ATPB, CF1beta, PB, ATCG00480) /E mRNA is reduced dramatically in atp4 mutants Zea mays
translational elongation rate affects reinitiation efficiency
large ribosomal subunit (60S (AtGGPPS11, AtGGPS11, AtLSU, GGPPS11, GGPS1, IDS11, LSU, AT4G36810) ) contains 28S ribosomal RNA (rRNA)
abnormal transcript with early stop codon results in predicted chimeric protein consisting of first 146 amino acids from (AtSIP1, RS1, SIP1, AT1G55740) followed by 25 amino acids encoded by Mu element Zea mays
diverse biological processes related to translation, transport, and biosynthetic processes
Arabidopsis (REIL1, AT4G31420) protein is associated with translating ribosome fractions such as 80S and polysome fractions Arabidopsis thaliana
ribosome access to the initiation site enables efficient translation of (PSBD, ATCG00270) mRNA
overexpression of NLS-truncated form of OsNMD3 interfered with translational efficiency Oryza sativa
ATP4 protein enhances translation of (ATPA, ATCG00120) mRNA Zea mays
polysome profiling investigated association of MP11ir transcripts with ribosomes Arabidopsis thaliana
elongation in eif3h mutant if slowed down would result in elevated polysome loading in mutant Arabidopsis thaliana
(ATP1, ATMG01190) mutants specifically disrupt (AthCF1beta, ATPB, CF1beta, PB, ATCG00480) /E translation Zea mays
Tab 1 may be involved in translation initiation and elongation Chlamydomonas reinhardtii
OPR proteins are required for translation Chlamydomonas reinhardtii
frameshift mutation in OsPORB leads to premature translational termination Oryza sativa
eIF3h preferentially boosts translation state of long mRNAs Arabidopsis thaliana
ribosomal protein mRNAs generally have short main ORFs Arabidopsis thaliana
ATG does not always give rise to contiguous reading frame
single-nucleotide deletion in CtFAD2-1 coding region causes premature termination of translation Carthamus tinctorius
mutations destroying stem-loop structure should render dicistronic RNA translatable Nicotiana tabacum
polycistronic transcripts in ppr10 mutants are populated with less ribosomes than in wild-type
intron retention in MULTIPOLAR SPINDLE 1 (ATPRD2, MEI4, MPS1, PRD2, AT5G57880) causes production of aberrant MULTIPOLAR SPINDLE 1 (ATPRD2, MEI4, MPS1, PRD2, AT5G57880) protein Arabidopsis thaliana
pre-rRNA processing is essential for ribosome biosynthesis
sRNA sequences set into different structural contexts would need to be tested to determine whether efficiency of translation is linked to RNA structure Nicotiana tabacum
translation initiation factor is induced in high temperature treatment Prunus persica
Tab 1 protein is involved in translation of (PSAB, ATCG00340) mRNA Chlamydomonas reinhardtii
(eS31x, UBQ5, AT3G62250) RNA is similarly distributed along total polysome profiles
up-regulation of chloroplast transcripts was not reflected at protein level; instead, some of them were actually down-regulated at the protein level (e.g. (PSBA, ATCG00020) in fug1-3 and the double mutant; (PETD, ATCG00730) in fug1-3; (RPS3, uS3M, ATMG00090) (RPS19, uS19C, ATCG00820) (RPL22, uL22C, ATCG00810) (bL33C, RPL33, ATCG00640) in the double mutant) Arabidopsis thaliana
endoplasmic reticulum (ER) is site of translation of mRNAs encoding membrane or secreted proteins
increased ribosome dropoff during scanning or elongation is plausible explanation for effect of mRNA length Arabidopsis thaliana
Potassium (K+) plays a role in protein synthesis
atp4 mutants have compromised translation of chloroplast (ATPA, ATCG00120) mRNA Zea mays
m6A have a selective programme detrimental for translation of mtRNAs modified at multiple sites, while a single methylation within the AUG site may enhance translation
polycistronic mRNA translation in plastids contrasts with translation on 80S cytoplasmic ribosomes based on scanning mechanism
GFP accumulation from second ORF is independent from protein accumulation from first ORF
fer-4 mutant shows greatly altered ribosome-mediated protein synthesis
post-transcriptional m6A modification was previously shown to enhance translation of eukaryotic transcripts
OsNF-YA4-IR1 and OsWRKY55-IR isoforms are detected in plant cells Oryza sativa
HSC70.1 protein may bind to HSC70.1 mRNAs at ribosomes during or soon after translation Arabidopsis thaliana
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) connects mRNA cap
root hair-related mRNA translation results in protein synthesis
large ribosomal subunit (60S (AtGGPPS11, AtGGPS11, AtLSU, GGPPS11, GGPS1, IDS11, LSU, AT4G36810) ) contains 5.8S ribosomal RNA (rRNA)
cycloheximide (CycH) blocks peptidyl transferase activity Arabidopsis thaliana; Brassica oleracea var. botrytis
early stop codon from intron retention yields no detectable LUC activity Arabidopsis thaliana
two splice variants generate two ORFs Arabidopsis thaliana
internal stop codon in (CLPP1, PCLPP, ATCG00670) most likely reflects post-transcriptional modifications and changes in translation
fug1-3 gun1-103 double mutant shows down-regulation of transcripts associated with decreased levels of the corresponding proteins and of proteins for which the corresponding transcripts are not down-regulated (e.g. (PSAF, AT1G31330) and (PSAO, AT1G08380) subunits of PSI; (PSBC, ATCG00280) and (PSBT, PSBTC, ATCG00690) of PSII; (PETB, ATCG00720) C and D from the cytochrome b6f complex, (ARRPS1, bS1c, PRPS1, RPS1, AT5G30510) 5, 6, 10, 13 and 20; RPL13, 14, 16, 17, 18, 28 and 35) Arabidopsis thaliana
OsMIOX-IR and OsHCI1-IR are mainly detected in light polysome (LP) fraction Oryza sativa
eIF4F is composed of (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040)
ribosome is the cellular translational machinery primarily responsible for protein synthesis from messenger RNAs
expression elements within 5′-UTR are needed for translation of downstream reading frame
translational efficiency is increased when transcript levels drop
(RPL10, RPL10A, SAC52, uL16z, AT1G14320) yeast mutants are complemented by maize (RPL10, RPL10A, SAC52, uL16z, AT1G14320) ortholog Saccharomyces cerevisiae; Zea mays
(ATRALF1, RALF1, RALFL1, AT1G02900) promoted mRNA translation of (CAR6, EHB1, AT1G70800) Arabidopsis thaliana
mRNA circularization leads to translation initiation
AtRPL10C may contribute with AtRPL10A to general translation under UV-B stress Arabidopsis thaliana
(ATRALF1, RALF1, RALFL1, AT1G02900) promoted mRNA translation of (CAR1, AT1G50180) Arabidopsis thaliana
numerous RNA-binding proteins and ribonucleoprotein complexes allow efficiency of translation
AtRPL10B has role different from AtRPL10A and AtRPL10C in control and UV-B conditions Arabidopsis thaliana
polysomal-profiling experiments were used to separate mRNA stably bound to mitochondrial ribosomes (mitoribosomes) Brassica oleracea var. botrytis
levels of various mitochondrial mRNAs were analyzed in polysomes Brassica oleracea var. botrytis
translation efficiencies in synthetic (ATP1, ATMG01190) and (NAD4, ATMG00580) mRNAs modified specifically at the translation initiation site increase at least to some extent Triticum aestivum
OsHMA5 encodes peptide of 1,002 amino acids Oryza sativa
eIF4 complex includes eIF4B
AtRPL10 proteins are conserved with S. cerevisiae (RPL10, RPL10A, SAC52, uL16z, AT1G14320) Arabidopsis thaliana; Saccharomyces cerevisiae
AtRPL10 constructs complement S. cerevisiae (RPL10, RPL10A, SAC52, uL16z, AT1G14320) conditional lethal mutant Arabidopsis thaliana; Saccharomyces cerevisiae
three AtRPL10 proteins could all be involved in translation Arabidopsis thaliana
EDTA disrupts polysomes and shifts target profiles toward lighter fractions Oryza sativa
OsPRPS2-IR is highly associated with heavy polysome (HP) fraction Oryza sativa
PPR proteins influence translation of organellar RNAs
translation of RAD51D.3 may not be affected by mutations in (ATRAD51D, RAD51D, SSN1, AT1G07745) Oryza sativa
polysome profiling analysis confirmed that the translation efficiency of stress granule stored mRNAs were indeed affected by loss of TaHSP70s Triticum aestivum
ortholog of mammalian 4E-BPs has not been identified in plants
g2 ortholog pairs were associated with translation Triticum aestivum; Aegilops longissima; Triticum urartu
RPL10s could have important roles as constituents of ribosomes in protein biosynthesis Arabidopsis thaliana
endoplasmic reticulum (ER) is vital for protein synthesis
(RPL10, RPL10A, SAC52, uL16z, AT1G14320) is component of 60S ribosomal subunit Arabidopsis thaliana
many IR transcripts associate with polysomes
eIF4 complex includes eIF4F
fer-4 mutant blocked RALF1-triggered (CAR5, AT1G48590) mRNA translation Arabidopsis thaliana
YFP(s)::HSC70.1 transcript is not translated protein synthesis Arabidopsis thaliana
(ATRALF1, RALF1, RALFL1, AT1G02900) promoted mRNA translation of (CAR5, AT1G48590) Arabidopsis thaliana
Ribo-seq and polysome profiling analyses indicate that (AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) promotes mRNA translation of N-related genes Arabidopsis thaliana
(RPL10B, uL16y, AT1G26910) function cannot be supplied by (RPL10, RPL10A, SAC52, uL16z, AT1G14320) or (RPL10C, SAG24, uL16x, AT1G66580) Arabidopsis thaliana
biological processes related to translation are enriched in Cluster E8
translation proteins reflect highly conserved functions for corresponding proteins Arabidopsis thaliana
internal ribosome entry site (IRES) recruits small ribosomal subunit (SSU)
(RPL10, RPL10A, SAC52, uL16z, AT1G14320) is important component of the large ribosomal subunit Arabidopsis thaliana
reporter gene fusions have identified translation signals in the 5'-UTR of plastid mRNAs
(AtCSP1, CSDP1, CSP1, AT4G36020) abundance was correlated with improved translation of ribosomal protein mRNAs Arabidopsis thaliana
PPR10 binding might have additional functions for translation besides relieving inhibitory RNA structures
less ribosomes on polycistronic transcripts in ppr10 mutants indicates that PPR10 is supporting translation of polycistronic transcripts
translation of modified mtRNAs is affected by magnitude and specific loci of m6A modifications Arabidopsis thaliana; Brassica oleracea var. botrytis
fer-4 mutant blocked RALF1-triggered (CAR1, AT1G50180) mRNA translation Arabidopsis thaliana
transported mRNA is translated in receiving cells Arabidopsis thaliana
non-family (NF) genes are involved in translation
full-length, spliced and polyadenylated FTa1 transcripts encode predicted FTa1 protein of 176 amino acids Medicago truncatula
neo cistron is equipped with 5′-UTR that is known to promote active translation in chloroplasts Nicotiana tabacum
different PPR binding sites can efficiently drive translation of plastid transgenes Nicotiana tabacum
different RNA structures have their specific impact on translational efficiency Nicotiana tabacum
Cs1g09635 encodes 25-amino acids peptide Citrus sinensis
OsORC3 ORF encodes 686 amino acid protein Oryza sativa
reporter gene fusions revealed that expression elements conferred only low levels of reporter protein accumulation
conserved NF genes are significantly over-represented in translation Arabidopsis thaliana; Brachypodium distachyon; Glycine max; Oryza sativa; Populus trichocarpa; Solanum tuberosum; Vitis vinifera; Zea mays
lncRNA1459 does not encode protein Solanum lycopersicum
decreased expression of ZmLRL5 led to a predominant suppression of gene transcription on ribosomal proteins-translation pathways Zea mays
polysome profiling assays analyzes translational status of (EBF1, FBL6, AT2G25490) /2 mRNAs Arabidopsis thaliana
5' expression signals comprise 5'-UTR
trnV–trnM is within top five peaks
frame shift from splicing of (ATBZIP60, BZIP60, AT1G42990) results in production of nucleus-localized form of (ATBZIP60, BZIP60, AT1G42990) Arabidopsis thaliana
sequence representing the 23S rRNA binding site of (SOT1, AT5G46580) and PPR53 did not allow translation of downstream gfp mRNA
ectopically expressed 1U transcripts interferes with endogenous (EBF1, FBL6, AT2G25490) /2 3′ UTRs Arabidopsis thaliana
steric hindrance could be due to failure to translate stable egfp mRNAs in pGW11
loss of PPR10 binding entails loss of translation of dicistronic egfp Nicotiana tabacum
PPR proteins support translation of reading frames downstream of their RNA-binding sites
translatomes comprise transcripts associated with tagged ribosomes within specific cell populations
Rht-B1c acts independently of translational reinitiation
fer-4 mutant blocked RALF1-triggered (CAR6, EHB1, AT1G70800) mRNA translation Arabidopsis thaliana
loss of TaHSP70s downregulated the TE of ribosomal components and translational related proteins Triticum aestivum
heterologous AtRPL10 proteins can be assembled into hybrid ribosome Arabidopsis thaliana; Saccharomyces cerevisiae
ScRPL10 contains amino acids involved in interactions with ribosome and partners Saccharomyces cerevisiae
decrease in general translation or reduction in translation of particular mRNAs results from down-regulation of cytosolic ribosomal protein genes under stress Arabidopsis thaliana
PPR proteins are involved in translation
CERES interaction with eIF3 and eIF4A during infection could displace the amount of eIF4A and eIF3 that could be engaged in canonical and non-canonical translation
open reading frame of 3909 bp predicted to be translated into 1303 amino acids Solanum chacoense
stress granules (SGs) comprise translation initiation complex
mobile mRNAs are believed to serve as template to translate into proteins
elongation factor EF-Tu is TrxB target Synechocystis sp. PCC 6803
OsNF-YA4-IR1 and OsWRKY55-IR isoforms are also prominently associated with heavy polysome (HP) fraction Oryza sativa
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) interacts with (CUM2, EIF4G, AT3G60240)
(RPL10B, uL16y, AT1G26910) may be involved in translation Arabidopsis thaliana
small ribosomal subunit (40S (AtSSU, GGPPS12, GGR, SSU, AT4G38460) ) contains ribosomal proteins (RPs)
nucleotide sequences is translated to protein sequences
RNAi mutation causes mRNAs to be translated mRNAs
EC7 contains GFP proximal 255 nucleotides Nannochloropsis oceanica
Inosine in RNA leads to stalling of translation
mutations in (ATRAD51C, RAD51C, AT2G45280) result in translational frameshifts and premature terminations of RAD51C.1 protein Oryza sativa
wild-type and (AMP1, AtAMP1, COP2, HPT, MFO1, PT, AT3G54720) (LAMP1, AT5G19740) show differential loading of transcripts onto membrane-bound polysomes (MBPs)
superwobbling is thought to be less efficient than standard base-pairing or wobbling
(CLPP1, PCLPP, ATCG00670) translation is inhibited by lincomycin and spectinomycin Arabidopsis thaliana
Arabidopsis RACK1 proteins complement S. cerevisiae cross pathway control2/rack1 mutants Arabidopsis thaliana; Saccharomyces cerevisiae
up-regulation of (RPL10C, SAG24, uL16x, AT1G66580) expression by UV-B is needed for translational function under UV-B stress Arabidopsis thaliana
mitochondria perform protein biosynthesis
(GUN1, AT2G31400) transcripts accumulate mainly in polysome fractions 8 to 11 Arabidopsis thaliana
ribosomal protein L3 is TrxB target Synechocystis sp. PCC 6803
Ribosomal proteins from the large subunit include L11 methyltransferase, L3, L24, and L28 Synechocystis sp. PCC 6803
(ATRALF1, RALF1, RALFL1, AT1G02900) promoted mRNA translation of (AtC2, AtGAP1, C2, CAR4, AT3G17980) Arabidopsis thaliana
CPK28-RI transcript might actually not be translated
22 of the 55 most highly expressed genes in gl3–sst (SIM, AT5G04470) trichomes have functions related to translation Arabidopsis thaliana
translation initiation factors are 12 additional putative 2′,3′-cAMP interactors with human SG homologs Arabidopsis thaliana
third highest expressed gene in gl3–sst (SIM, AT5G04470) trichomes encodes translation elongation factor 1-alpha family member Arabidopsis thaliana
some npcRNAs can code for small functional peptides
polysome profile shows fractions pooled into heavier polysomal and lighter monosomal fractions Brassica oleracea var. botrytis
translation coupling between the first and second ORFs is tested by expressing neo gene from L clpP and L T7g10 leaders
cytosol- and mitochondria-localized GluRS, OsERS1 affects protein synthesis Oryza sativa
60S ribosomal subunit contains 5.8S ribosomal RNA (rRNA)
60S ribosomal subunit contains 5S ribosomal RNA (rRNA)
(SAUR62, AT1G29430) and (SAUR75, AT5G27780) interactions with (bL12cz, RPL12, RPL12-A, AT3G27830) family proteins in the nucleus regulate translational activities Arabidopsis thaliana
AI cell shows enrichment in GO terms associated with ribosome biogenesis, translation, protein modification, intracellular transport, substrate-specific transporters, ion channel activity, kinase activity, and DNA replication Hieracium praealtum
(REIL1, AT4G31420) is present in translating ribosome fractions Arabidopsis thaliana
cytosolic ribosomes contains small ribosomal subunit (40S (AtSSU, GGPPS12, GGR, SSU, AT4G38460) )
Recombinant Arabidopsis (CUM2, EIF4G, AT3G60240) 1–1727 mixed with equimolar amounts of cap-binding proteins were tested for ability to translate mRNA Arabidopsis thaliana
(RPL27A, RPL27AB, uL15y, AT1G23290) genes comprises RPL27aC and (RPL27A, RPL27AB, uL15y, AT1G23290) Arabidopsis thaliana
eight members of aaRSs exist in mammalian cytoplasm as a multitRNA synthetases complex (MSC)
(bTHXc, PSRP4, AT2G38140) (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4) is chloroplast phosphoprotein Arabidopsis thaliana
proteins related to translation discovered to exist in phloem
60S ribosomal subunit contains 25S ribosomal RNA (rRNA)
reduced tRNA set in plastids is not optimized for many A/U-rich codons used in plastid mRNAs
heat stress impairs translation initiation
ZmLRL5 may function as a key player in orchestrating translational process Zea mays
deletion of EPU motifs greatly enhances translation of (EBF1, FBL6, AT2G25490) mRNA
boron may affect translational process Arabidopsis thaliana
ribosome density is indicator of translational activity for ORFs Arabidopsis thaliana
intronless 405 nucleotide sequence encodes 134 amino acid protein Oryza sativa
(ACD, ALATS, AT1G50200) (ALANYL-TRNA SYNTHETASE) is chloroplast phosphoprotein Arabidopsis thaliana
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) (EIF(ISO)4E, EIF4E2, eIFiso4E, LSP, LSP1, AT5G35620) double mutant is lethal Arabidopsis thaliana
(RPL10B, uL16y, AT1G26910) is probably involved in translation Arabidopsis thaliana
single nucleotide mutation (ACG to ATG) led to ORF1 that can be translated into microRPG1 protein Zea mays
(CUM2, EIF4G, AT3G60240) and eIF4A interaction circularizes mRNA
(RPL10, RPL10A, SAC52, uL16z, AT1G14320) yeast mutants are complemented by human (RPL10, RPL10A, SAC52, uL16z, AT1G14320) ortholog Saccharomyces cerevisiae; Homo sapiens
(RPL10B, uL16y, AT1G26910) could have very specific role that is not shared with (RPL10, RPL10A, SAC52, uL16z, AT1G14320) or (RPL10C, SAG24, uL16x, AT1G66580) Arabidopsis thaliana
all mutants show common upregulation of translation-associated transcripts Arabidopsis thaliana
2-bp deletion in coding region of Ghir_D03G011010.1 may have led to premature termination Gossypium hirsutum
premature stop codon causes early predicted termination of translation Oryza sativa
(RPL10B, uL16y, AT1G26910) is possibly essential for translation in both reproductive organs Arabidopsis thaliana
(RPL10C, SAG24, uL16x, AT1G66580) would also be involved in translation after UV-B exposure Arabidopsis thaliana
recruitment of mRNAs to ribosome is vital process for translation initiation
gun1-103 mutant does not show some chloroplast genes significantly up-regulated at the transcript level Arabidopsis thaliana
A insertion in crk1-cas3 causes premature termination Zea mays
disruption of ZmLRL5 resulted in severe inhibition of translation efficiency Zea mays
MP mRNA in heavy polysome fraction suggests active translation of MP Arabidopsis thaliana
elongating root hair is highly sensitive to translation inhibition
miRNA target transcripts ( (ATHB-14, ATHB14, PHB, PHB-1D, AT2G34710) (AtSOD2, CSD2, CZSOD2, SOD2, AT2G28190) (ANAC098, ATCUC2, CUC2, AT5G53950) SCL6, (MEE35, PCF4, TCP4, AT3G15030) ) in wild-type are similarly distributed as miRNA target transcripts ( (ATHB-14, ATHB14, PHB, PHB-1D, AT2G34710) (AtSOD2, CSD2, CZSOD2, SOD2, AT2G28190) (ANAC098, ATCUC2, CUC2, AT5G53950) SCL6, (MEE35, PCF4, TCP4, AT3G15030) ) in (AMP1, AtAMP1, COP2, HPT, MFO1, PT, AT3G54720) (LAMP1, AT5G19740)
retention of last intron in MULTIPOLAR SPINDLE 1 (ATPRD2, MEI4, MPS1, PRD2, AT5G57880) introduces premature stop codon Arabidopsis thaliana
chRNAs would undergo translation by non-canonical translation initiation Nannochloropsis oceanica
lowly expressed transcript with 13 bp deletion in exon 7 causes frameshift mutation Zea mays
plasmid pRARE encodes rare tRNAs Escherichia coli
58 scion-to-rootstock-to-scion mobile mRNAs revealed overrepresentation of diverse biological processes Nicotiana benthamiana; Solanum tuberosum
ribosome pausing is not interfering with measurements of translation efficiencies
ribosomal protein L3 identified for the first time in this study Synechocystis sp. PCC 6803
NON-EXPRESSOR OF PR GENES 1 (ATNPR1, NIM1, NPR1, SAI1, AT1G64280) has similar effects as SUNA1 on translational efficiency of defense genes Arabidopsis thaliana
distinct bias toward G3s, C3s, GC3s, and overall GC content suggests potential adaptations or optimizations for translational efficiency
peroxidases have been translated from stored mRNAs
(HCF107, AT3G17040) supports translation of (PSBH, ATCG00710) reading frame
GC and (SCS, SCS-A, SCS-B, AT4G38810) had much lower levels of 40S ribosomal protein S14-1
codon usage bias differs in monocots and dicots
2,187-bp open reading frame encodes polypeptide of 728 amino acid residues
gl3–sst (SIM, AT5G04470) trichomes contain proteins involved in translation Arabidopsis thaliana
eIF4F is composed of (CUM2, EIF4G, AT3G60240)
hybrid ribosomes are defective in subunit assembly Saccharomyces cerevisiae
hybrid ribosomes display partial reduction of translational activity Saccharomyces cerevisiae
Arabidopsis mitochondrial ribosomes (mitoribosomes) are characterized by an untypically large 'small' ribosomal subunit bearing an additional RNA domain Arabidopsis thaliana
wobble uridine modification of tRNA is essential for efficient translation
translation of in vitro transcribed RNAs was assayed in the presence of cycloheximide (CycH) Arabidopsis thaliana; Brassica oleracea var. botrytis
experimental design enabling predictable protein output from polycistronic mRNAs enables predictable protein output from polycistronic mRNAs
large ribosomal subunit (60S (AtGGPPS11, AtGGPS11, AtLSU, GGPPS11, GGPS1, IDS11, LSU, AT4G36810) ) contains 5S ribosomal RNA (rRNA)
translation initiation factors comprised in proteins belonging to the categories RNA binding, translation, and response to stress Arabidopsis thaliana
m6A regulates through its impact on rate of translation
protoplast treatment with cycloheximide and estradiol completely inhibits new protein synthesis Arabidopsis thaliana
Ribo-seq is used to estimate translational activity of mRNAs
unpolyadenylated transcripts would miss the property associated with poly(A) tails with respect to promoting translation through facilitation of interaction with initiation factors
first translation start codon provided open reading frame of 2610 bp encoding 870 amino acids Griffithsia monilis
Mp rr-myb5,2 mutants show enriched GO terms for iron ion transmembrane transport, translation, and translational elongation Marchantia polymorpha
premature stop codon after 314 aa results in 75-aa C-terminally truncated polypeptide Arabidopsis thaliana
genes are able to escape translational arrest
m6A was found to affect translation of both bacterial and nuclear-encoded mRNAs
DEAD-box proteins are potentially involved in translation initiation
(AT.EIF4E1, CUM1, EIF4E, eIF4E1, AT4G18040) mRNA is not translated within chloroplast Arabidopsis thaliana
2A sequences cause translational skip of the ribosome
post-transcriptional m6A modification may affect translation of nuclear- or organellar-encoded polypeptides Arabidopsis thaliana; Brassica oleracea var. botrytis
1869-bp full-length cDNA translates to P-type PPR protein with 623 amino acids forming 10 PPR motifs Zea mays
excessive m6A modification was found to be detrimental for in vitro translation of m6A modified (ATP1, ATMG01190) (MATR, ATMG00520) and (NAD4, ATMG00580) transcripts Arabidopsis thaliana; Brassica oleracea var. botrytis
translation efficiencies of mtRNAs were reduced with increased m6A/A ratios Arabidopsis thaliana; Brassica oleracea var. botrytis
IRES element alone cannot account for observed translation rates under hypoxia Zea mays
translation activity in 'body-labelled' (ATP1, ATMG01190) (NAD4, ATMG00580) and (MATR, ATMG00520) transcripts was reduced Triticum aestivum
(SRT1, AT5G55760) transcript could translate into functional (SRT1, AT5G55760) protein Arabidopsis thaliana
intersubunit bridge B2a connects large subunit (LSU) to decoding center of small subunit (SSU)
60S ribosomal subunit contains 28S ribosomal RNA (rRNA)
E. coli peptidyl-tRNA hydrolase cleaves ester bond linking tRNA and nascent peptide Escherichia coli
analyses suggest some enrichment of m6A modifications in ribosomal-associated mRNAs Brassica oleracea var. botrytis
plastid has ability to translate polycistronic mRNAs
total polysomes (TPs) are composed of soluble polysomes; membrane-associated polysomes; cytoskeleton-associated polysomes
m 6 A regulates translation
helicase activity of plant ribosomes is much stronger than helicase activity of yeast ribosomes
low expression of osmotically responsive genes2 (ENO2, LOS2, AT2G36530) is translated into cytosolic enolase2 (ENO2, LOS2, AT2G36530) Arabidopsis thaliana
VAS contains two potential coding products based on sense strand ranging from amino acids 13 to 154 Triticum aestivum
(CS17, PDE347, PRPS17, RPS17, uS17c, AT1G79850) (ribosomal protein S17) is chloroplast phosphoprotein Arabidopsis thaliana
wild-type Arabidopsis remodels cytosolic translation machinery Arabidopsis thaliana
ribosome coverage of coding regions is in good agreement with other measurements of translation
gl3–sst (SIM, AT5G04470) trichome cytoplasm contains ribosome-like structures Arabidopsis thaliana
Ribosomal proteins from the small subunit include S2 and S10 Synechocystis sp. PCC 6803
extremely stable hairpin structure with 150 nt stem region cannot block translation elongation
Lysate derived from evacuolated protoplasts of tobacco BY-2 cultured cells recapitulates canonical cap- and poly(A)-dependent translation Nicotiana tabacum
majority of mitochondrial complex subunits and other mitochondrial proteins are synthesized in cytoplasm
Zn-binding proteins are involved in numerous biological processes, including transcription, translation, photosynthesis, and the metabolism of reactive oxygen species
mutations in zmivd1-c1, zmivd1-c2, and zmivd1-c3 give rise to defective proteins Zea mays
thymine insertion between nucleotide positions 30 and 31 generates premature translation termination
non-splicing of intron-6 leads to frame-shift and premature termination codon Triticum petropavlovskyi
conformational changes are involved in regulation of ribosome recycling
(PEG2, AT1G49290) transcripts accumulate but fail to be translated
RNA helicase activity of ribosomes can readily eliminate RNA high-order structures and mRNA-bound proteins during elongation
mOsmtSSB1-II transcript exhibits translational frame shift Oryza sativa
stronger codon usage may increase translation efficiency
use of codons that match the most abundant tRNA reduces time to find and bind the correct tRNA
intron retention results in production of dysfunctional proteins
effect of (TPPJ, AT5G65140) translational regulation by sucrose was small and of doubtful importance given multiplicity of catalytically active (Plsp2B, TPP, AT2G30440) isoforms that were unaffected Arabidopsis thaliana
translational interference could arise from competition and/or titration of translational repressors binding to endogenous 3′ UTR regions Arabidopsis thaliana
25 upregulated and 44 downregulated proteins enriched in photosynthesis, translation, and ribonucleoprotein complex assembly Arabidopsis thaliana
SD18 translation signal improves translation efficiency
Translation from Exon2 'ATG' start codon would generate protein that is 64 residues shorter than the protein encoded by AAE13.1 and AAE13.2 Arabidopsis thaliana
processed short orf79 RNA is not translated Oryza sativa
(SGC, AT4G18530) .1 encodes 389-aa polypeptide Arabidopsis thaliana
most favoured ATG codons in the Gracilaria monilis sequence would produce protein with the complete CBM Gracilaria monilis
cold shock proteins (CSPs) blockade of secondary structure formation in mRNA secondary structure
chimeric (SPPA, SPPA1, AT1G73990) -320 mutant mRNA has disrupted translation of normal (SPPA, SPPA1, AT1G73990) product Arabidopsis thaliana
translational proteins identified in this study comprised 16.8% of identified proteins Arabidopsis thaliana
non-canonical translation initiation complexes drive translation during specific stages of the light cycle
CRS2 mitochondrial paralog (AT5G19830) could have dual function in RNA splicing and translation Arabidopsis thaliana
high GC content may affect translational rates