| cTP-APX |
marks |
epidermal chloroplasts transiently expressing APX |
Nicotiana benthamiana |
| (ML3, AT5G23820) |
carries |
N-terminal signal peptide |
Arabidopsis thaliana |
| NbAPX3-1 |
was found in both ER and peroxisome membranes and might be targeted to peroxisomes via |
pER |
Nicotiana benthamiana |
| Escherichia coli DAG kinase (DAGK) |
is targeted to |
each leaflet of chloroplast envelope membranes |
Arabidopsis thaliana |
| tpTOC75 |
was shown to target |
soluble GFP to intermembrane space |
|
| DAGK targeted with tpTOC75 |
is expected to be able to self insert into |
inner and outer envelope membranes facing intermembrane space |
|
| Plastidic FtsZs |
are nuclear-encoded and targeted to |
the stroma |
|
| unmodified crtB protein with cryptic plastid targeting sequence |
results in |
plastid targeting |
|
| (RBCS1A, AT1G67090) cTP-mNeonGreen ( cTP-mNG) |
marks |
chloroplast body and stromules |
Nicotiana benthamiana; Arabidopsis thaliana |
| Pt9029 |
is translocated into |
host chloroplasts |
Triticum aestivum |
| DAGK targeted with N-DGD1 |
is expected to insert only in |
chloroplast outer envelope |
|
| NLS from SV40 |
is inefficient in restricting |
small GFP fusion proteins to the nucleus |
|
| overexpressed Trx h |
is targeted to |
protein body |
|
| third FtsZ family member in Physcomitrella patens |
is dually targeted to |
plastids and cytosol |
Physcomitrella patens |
| peroxisomal membrane protein targeting |
requires |
ATP and molecular chaperone |
|
| all known GPI-anchoring proteins |
have |
N-terminal signal sequence |
|
| (RBCS1A, AT1G67090) cTP-mNeonGreen ( cTP-mNG) |
localizes to |
chloroplast stroma |
Nicotiana benthamiana; Arabidopsis thaliana |
| CsCCD2 localization |
is in agreement with |
predicted presence of plastid transit peptide |
Crocus sativus |
| many nuclear-encoded chloroplast proteins |
lack |
cleavable transit peptide |
|
| non-canonical chloroplast proteins |
lack |
predicted chloroplast transit peptide |
|
| proteins with mitochondrial targeting peptide |
may contain N-terminal transit peptides that act as |
chloroplast transit peptides |
|
| dually targeted proteins |
are almost indistinguishable from |
mitochondrial targeting peptides and chloroplast targeting peptides |
|
| peroxisomal membrane proteins |
is first targeted to |
peroxisomal endoplasmic reticulum (pER) |
|
| Pt effector protein Pt9029 |
contains |
transit peptide |
Puccinia triticina |
| (ML3, AT5G23820) and homologous sequences |
have |
N-terminal signaling peptide |
Arabidopsis thaliana; Brassica rapa |
| first 20 amino acids of (PBS1, AT5G13160) |
is sufficient for targeting |
GFP to the plasma membrane (PM) |
Arabidopsis thaliana |
| S-acylation of Cys-3 and/or Cys-6 |
is sufficient for |
plasma membrane (PM) localization of (PBS1, AT5G13160) independent of myristoylation |
Arabidopsis thaliana |
| C-terminal domain structure |
has been shown to mediate |
localization to endoplasmic reticulum (ER) |
Rattus norvegicus |
| (OHP, OHP1, PDE335, AT5G02120) and (OHP2, AT1G34000) |
contain |
putative N-terminal chloroplast-targeting sequences |
Arabidopsis thaliana |
| thioredoxins |
remain in |
cytosol |
Phaeodactylum tricornutum |
| Chlamydomonas HLP protein |
is targeted to |
chloroplasts |
Chlamydomonas reinhardtii |
| proteins lacking cTP |
might not possess |
cleavable targeting pre-sequence |
Arabidopsis thaliana |
| amino acid distribution |
suddenly changes at about 90 amino acids in |
dual targeting peptides (dTPs) |
Arabidopsis thaliana |
| Crocus sativus (ALDH3, ALDH3I1, AT4G34240) (CsALDH3I1) |
contains |
C-terminal KKXX signal |
Crocus sativus |
| ribosome pausing |
can at least facilitate |
SRP binding |
Saccharomyces cerevisiae |
| several of the thioredoxins |
are targeted into |
plastids of Phaeodactylum tricornutum |
Phaeodactylum tricornutum |
| (ATPRX Q, PRXQ, AT3G26060) |
is targeted to |
chloroplasts |
Arabidopsis thaliana |
| 117 tentative non-canonical chloroplast proteins |
possess |
mitochondrial targeting peptide |
|
| dual targeting peptides (dTPs) |
have |
ambiguous targeting peptide |
Arabidopsis thaliana |
| 43-amino acid chloroplast transit peptide |
suggests |
protein localization in chloroplast |
Leucaena leucocephala |
| PpMSRB1 |
is predicted to be localized to |
plastid |
Physcomitrella patens |
| PM localization of defense proteins, including receptor-like cytoplasmic kinases and NLR proteins |
is often mediated by |
S-acylation |
|
| cytosolic sorting mechanisms |
rest on |
phosphorylation of transit peptides and interaction of transport substrate with cytosolic 14–3–3 proteins |
|
| first N-terminal domain of LCI1 |
was presumed to serve as |
signal peptide |
Chlamydomonas reinhardtii |
| (EMB2279, EMB88, SOT5, AT1G30610) |
was predicted to target |
chloroplasts |
Arabidopsis thaliana |
| dually targeted proteins in Arabidopsis thaliana |
have average length of approximately |
53 amino acids |
Arabidopsis thaliana |
| underexpressed Trx h counterpart |
is targeted to |
cytosol |
|
| dually targeted proteins |
do not show increased overall hydrophobicity compared to |
mitochondrial targeting peptides and chloroplast targeting peptides |
|
| dual targeting peptides (dTPs) |
show enrichment in phenylalanine compared to |
chloroplastic transit peptides |
Arabidopsis thaliana |
| serine |
is highly overrepresented in |
dual targeting peptides (dTPs) compared to mitochondrial presequences |
Arabidopsis thaliana |
| serine |
shows similar amount in |
dual targeting peptides (dTPs) and chloroplastic transit peptides |
Arabidopsis thaliana |
| transmembrane domain in CsALDH3I1 |
is reminiscent of |
ER localization sequence |
Crocus sativus |
| Cytochrome f (Cyt f) |
is the only plastid-encoded protein with |
cleavable signal peptide |
maize |
| PpMSRB2.2 |
is predicted to be localized to |
plastid |
Physcomitrella patens |
| presequence and first transmembrane span of the triose phosphate–phosphate translocator |
directs |
yellow fluorescent protein (YFP) |
Nicotiana tabacum |
| transit peptides from green algae |
promote import into |
chloroplasts |
|
| certain proteins |
have |
ER signal peptide |
|
| CLE proteins |
have |
putative signal or membrane anchor peptide at N-terminus |
|
| reporter construction Cytc1(1–141)/EYFP |
consists of |
N-terminal 141 amino acids of Cytc1 precursor and EYFP |
|
| increase in TMD length of the early enzyme GMI from 16 to 23 amino acids |
resulted in |
trans-Golgi targeting |
|
| cytoplasmic tails of different glycosyltransferases |
contain |
important information for their sub-Golgi targeting and concentration |
|
| ALB3b protein |
does not contain |
the basic lysine-rich C-terminal domain (CTD) from plants |
Phaeodactylum tricornutum |
| S-acylation |
is required for targeting of |
AvrPphB to the plasma membrane (PM) |
Arabidopsis thaliana |
| 43 dually targeted proteins |
are found in |
organellar proteomes of Arabidopsis thaliana |
Arabidopsis thaliana |
| protein-coding genes |
acquired |
targeting signals |
|
| (DCC1, AT5G50100) |
is localized in |
mitochondria |
Arabidopsis thaliana |
| combination of RFP-fusion and in vitro import assays |
indicates |
none of non-cTP proteins possess cleavable presequence |
Arabidopsis thaliana |
| PhBS |
may facilitate |
import of (ATICS1, EDS16, ICS1, SID2, AT1G74710) to chloroplasts |
Arabidopsis thaliana |
| AtNTRC |
has N-terminal extension that might function as |
chloroplast-targeting peptide |
Arabidopsis thaliana |
| SRP-dependent targeting |
was found not to be related to |
ribosome pausing |
Escherichia coli |
| dually targeted precursor proteins |
contain |
first 100 N-terminal residues |
Arabidopsis thaliana |
| preregion |
contains |
a signal peptide |
|
| CsALDH2B4 and CsALDH6B2 and CsALDH5F1 |
are predicted to be |
mitochondrial |
Crocus sativus |
| lack of large N-terminal hydrophilic domain in PHT4;6 |
could account for |
different sub-cellular localization |
Arabidopsis thaliana |
| differences in extent of C-terminal tail domain included in constructs |
may in part account for |
difference in protein localization |
Arabidopsis thaliana; Nicotiana benthamiana |
| (ATOBGC, ATOBGL, CPSAR1, EMB269, EMB3138, Obg A-2, OBGC, OBGL, AT5G18570) |
includes |
predicted transit peptide for chloroplast targeting |
Arabidopsis thaliana |
| dual targeting peptides (dTPs) |
show highest enrichment in arginine compared to |
chloroplastic transit peptides |
Arabidopsis thaliana |
| CSLC protein |
localized to |
plasma membrane |
|
| N-terminal presequence of (ATOBGC, ATOBGL, CPSAR1, EMB269, EMB3138, Obg A-2, OBGC, OBGL, AT5G18570) |
included in |
full-length (ATOBGC, ATOBGL, CPSAR1, EMB269, EMB3138, Obg A-2, OBGC, OBGL, AT5G18570) construct |
Arabidopsis thaliana |
| (PBS1, AT5G13160) G2A mutant |
maintains |
plasma membrane (PM) localization |
Arabidopsis thaliana |
| hydrophobic region at the N terminus of (ATPHB3, EER3, PHB3, AT5G40770) |
likely serves to anchor |
(ATPHB3, EER3, PHB3, AT5G40770) to membranes |
Arabidopsis thaliana |
| organelle proteome |
is regulated at |
targeting of precursor proteins level |
|
| major pause site upstream of first transmembrane domain of D1 |
could facilitate |
targeting |
maize |
| PHT4;6:GFP in yeast PAM2 |
is mainly targeted to |
vacuole membrane |
Saccharomyces cerevisiae |
| dual targeting peptides (dTPs) |
show significant enrichment in phenylalanine compared to |
mitochondrial presequences |
Arabidopsis thaliana |
| (nMAT4, AT1G74350) |
has |
dual localization |
Arabidopsis thaliana |
| PpHXK1 |
has experimentally determined |
sub-cellular localization |
Physcomitrella patens |
| imported proteins in chloroplasts |
are further targeted to |
thylakoid lumen |
|
| described CsUGTs |
none contain |
chloroplast transit peptides |
Crocus sativus |
| (NDA2, AT2G29990) |
is dual-targeted to |
mitochondria and peroxisomes |
Arabidopsis thaliana |
| dually targeted proteins |
have lower hydrophobicity than |
signal peptides directing proteins to ER and Golgi |
|
| (FCLY, AT5G63910) coding region |
contains |
two potential sequence-specific vacuolar sorting signals |
Arabidopsis thaliana |
| reporter polypeptide Cytc1(1–141)/EYFP |
shows |
same targeting characteristics as authentic Cytc1 precursor |
|
| (TAT, TAT3, AT2G24850) signal sequence |
contains |
twin-arginine motif |
|
| (OOP, TOP1, AT5G65620) |
is hypothesized to participate in |
organelle import processing |
Arabidopsis thaliana |
| Chlamydomonas reinhardtii (54CP, CPSRP54, FFC, SRP54CP, AT5G03940) |
is not involved in |
LHCP recognition |
Chlamydomonas reinhardtii |
| Arabidopsis thaliana (54CP, CPSRP54, FFC, SRP54CP, AT5G03940) |
has |
dual function |
Arabidopsis thaliana |
| relative protein abundances combined with MS/MS identifications |
employed to assess |
dual targeting and its extent |
Physcomitrella patens |
| Each copy of partial PRK-encoding genes |
includes |
bipartite targeting peptide |
Elysia chlorotica |
| stromal targeting transit peptide of acyltransferase1 (tpATS1) |
targets DAGK to |
inner leaflet of inner chloroplast membrane and outer leaflet of thylakoid membranes |
|
| substitution of Cys-4 of (EMB3113, PRPS5, RPS5, SCA1, uS5c, AT2G33800) with Ala |
disrupts |
(EMB3113, PRPS5, RPS5, SCA1, uS5c, AT2G33800) plasma membrane (PM) localization |
Arabidopsis thaliana |
| 1-Cys MSRB genes from higher plants |
code for |
plastidic proteins |
higher plants |
| genuine chloroplast proteins with presequences resembling mTPs |
likely exist |
chloroplast proteome |
Arabidopsis thaliana |
| dual targeted proteins |
lack increased hydrophobicity in |
first 70 amino acids |
|
| targeting of precursor protein to correct organelle |
is |
very complex process |
|
| mitochondrial and chloroplast transit peptides |
show remarkable similarity in |
amino acid composition |
|
| (RBCS1A, AT1G67090) transit peptide |
targets |
plastids |
|
| reporter polypeptide Cytc1(1–141)/EYFP |
is transported into |
both endosymbiotic organelles |
|
| exchange of the cytoplasmic protein parts |
resulted in |
alterations in sub-Golgi targeting of two glycosyltransferases involved in glycolipid biosynthesis |
|
| putative signal peptide (SP) at the first 20 amino acids of (APD9, FGT2, AT5G66080) |
is involved in |
targeting of (APD9, FGT2, AT5G66080) to the PM |
Arabidopsis thaliana |
| intrinsic protein signals for lipid-driven sorting of Golgi-resident processing enzymes |
have not been identified |
for rapid partitioning model |
|
| another in silico-based screen approach |
predicted that |
78 Arabidopsis transcription factors reside in the plastids |
Arabidopsis thaliana |
| transit peptide of Cytc1 |
is able to interact with |
protein transport machineries of both mitochondria and plastids |
Pisum sativum |
| PHT4.1, PHT4.2, PHT4.4, and PHT4.5 |
are targeted to |
chloroplasts |
Arabidopsis thaliana |
| motifs in cytoplasmic regions of plant membrane proteins |
have been identified as |
signals for ER-to-Golgi targeting or retrieval |
|
| study by Ouyang et al. (2020) |
will certainly help to expand |
understanding of protein targeting in cells |
|
| CRS2 orthologs |
lack |
predictable targeting signal |
Arabidopsis thaliana |
| protein Cytc1(1–141)/EYFP |
accumulates in |
mitochondria |
Pisum sativum |
| site-directed mutagenesis exchanging cysteine for glycine at position 152 |
did not impair |
localization of the protein to the PM |
Arabidopsis thaliana |
| PPR proteins |
are targeted to |
chloroplasts |
|
| CpSRP43-like ankyrin-repeat proteins |
can be found in |
red algae, haptophytes, and several species within the SAR clade |
|
| longer isoform of (nMAT4, AT1G74350) |
is observed in |
mitochondria |
Arabidopsis thaliana |
| precursors containing plastid transit peptide |
implies localization in |
plastid |
|
| extraterminal region (ETR) |
is necessary for |
correct cell wall targeting of (XTH29, AT4G18990) |
Arabidopsis thaliana |
| different initiation sites |
result in proteins targeted to |
plastid |
Arabidopsis thaliana |
| permease in chloroplasts 1 (AtTic21, CIA5, PIC1, TIC21, AT2G15290) |
is targeted to |
inner envelope |
Arabidopsis thaliana |
| feruloyl-arabinoxylans (AtNPF6.3, ATNRT1, B-1, CHL1, CHL1-1, NPF6.3, NRT1, NRT1.1, AT1G12110) 2-xylosyl transferase |
lacks signature motifs to direct into |
endoplasmic reticulum/Golgi system |
|
| OsHXK4 |
has experimentally determined |
sub-cellular localization |
Oryza sativa |
| (EMB139, EMB506, STT1, AT5G40160) and (123B, AKR, AKRP, EMB16, EMB2036, STT2, AT5G66055) together |
facilitate the binding of |
iOE23 (intermediate form of (OE23, OEE2, PSBP-1, PSII-P, AT1G06680) without the transit peptide) to thylakoid membranes |
|
| diatoms |
have homologs of |
(54CP, CPSRP54, FFC, SRP54CP, AT5G03940) (CPFTSY, FRD4, AT2G45770) and two variants of (ALB3, AT2G28800) (ALB3a and ALB3b) |
|
| (BIGYIN, FIS1A, AT3G57090) |
contains |
arginine and two lysines (diK motif) |
Arabidopsis thaliana |
| N-terminal fusion of chloroplastic acyl-CoA activating enzyme isoform 14 (AAE14, AT1G30520) with EYFP |
places predicted PTS1 of AAE14 at |
free C-terminus |
|
| naphthoate synthase (NS/ (DHNS, ECHID, AT1G60550) ) |
carries |
putative PTS2 nonapeptide in the N-terminal domain |
Arabidopsis thaliana |
| protein transport |
is generally assumed to be |
strictly organelle-specific |
|
| analogous reporter constructions comprising N-terminal 77 residues of Cytc1 covering transit peptide |
yield |
essentially identical results |
Pisum sativum |
| similar mechanism involving binding to the short cytoplasmic regions and resulting in either retrieval from late Golgi compartments or retention within distinct cisternae |
remains to be shown whether |
exists in plant cells |
|
| Type A HXKs |
specify targeting to |
plastids |
|
| imported proteins in chloroplasts |
are further targeted to |
inner envelope |
|
| imported proteins in chloroplasts |
are further targeted to |
thylakoid membrane |
|
| LHCP translocation defect protein (GDC1, LTD, AT1G50900) |
is apparently missing in |
diatom genomes |
|
| Arabidopsis FC lyase coding sequence |
contains |
amino terminal signal sequence |
Arabidopsis thaliana |
| CRS2 orthologs |
are predicted to be targeted to |
mitochondria |
Arabidopsis thaliana |
| THMM |
used to predict |
sub-cellular localization of HXK gene family members |
|
| HDEL |
is |
ER retention signal |
|
| (TAT, TAT3, AT2G24850) signal sequence |
contains |
hydrophobic domain |
|
| ALB3a |
does contain |
the basic lysine-rich CTD |
Phaeodactylum tricornutum |
| analogous reporter constructions comprising complete coding sequence of Cytc1 |
yield |
essentially identical results |
Pisum sativum |
| SRP54 protein |
is universally conserved across |
all kingdoms of life |
|
| ADCL2 targeting |
cannot be predicted based on |
available sequence data |
Solanum lycopersicum |
| signal peptide of AtWAK2 |
located at |
N-terminus of FP |
Arabidopsis thaliana |
| protein transport experiments with isolated organelles |
have the inherent disadvantage that |
cytosolic factors that might influence targeting specificity are excluded from the assays |
|
| different types of GH17 proteins |
are likely delivered by distinct mechanisms to |
different plasmodesmata (PD) sites |
|
| CTP1, CTP2, and CTP3 trafficking |
depends on |
in planta cleavage of an N-terminal signal sequence |
Melampsora larici-populina |
| ER–CFP marker construct |
created by combining |
signal peptide of AtWAK2 at N-terminus and ER retention signal His-ASP-GLU-Leu at C-terminus |
Arabidopsis thaliana |
| CpSRP43-like ankyrin-repeat proteins |
are missing in |
Bolidophyceae and diatoms |
|
| class III peroxidases |
are targeted via |
endoplasmic reticulum (ER) |
|
| RRK sequence in (AS2, AT1G65620) |
is proposed to be part of |
nucleolar localization signals (NOLS) |
Arabidopsis thaliana |
| proteins |
are targeted to |
organelles |
|
| dual targeted proteins |
show significant increases in |
phenylalanine and leucine |
|
| dually targeted proteins |
may be up to |
90 residues long |
|
| arginine |
shows 82% more in |
dual targeting peptides (dTPs) compared to chloroplastic transit peptides |
Arabidopsis thaliana |
| VpPsbP |
contains |
N-terminal chloroplast transit peptide |
Vitis piasezkii |
| (NPC5, AT3G03540) |
lacks |
signal peptide |
Arabidopsis thaliana |
| TargetP |
used to predict |
sub-cellular localization of HXK gene family members |
|
| Arabidopsis HXK proteins |
have experimentally determined |
sub-cellular localization |
Arabidopsis thaliana |
| proteins with mitochondrial targeting peptide |
may represent transit peptides that target to |
both chloroplasts and mitochondria |
|
| ThrRS–dTP after deletion of 23 N-terminal amino acids |
was completely inactive when tested |
experimentally |
|
| dual targeting peptides (dTPs) |
show significant enrichment in serine compared to |
mitochondrial presequences |
Arabidopsis thaliana |
| class III peroxidases |
are targeted to |
outside of the plant cell |
|
| minor fraction of protein Cytc1(1–141)/EYFP |
was transported into |
plastids present in epidermal cells |
Pisum sativum |
| WKS1 |
enters |
chloroplast |
Triticum aestivum |
| sequences with signal peptides |
are likely to be targeted to |
cell wall |
|
| N-terminal signal sequence |
mimics |
plant chloroplast targeting sequences |
Melampsora larici-populina |
| (ATIREG3, FPN3, IREG3, MAR1, RTS3, AT5G26820) |
has indicated |
chloroplast localization |
|
| lavandulyl diphosphate synthase (LiLPPS) |
contains |
putative plastidial transit peptide |
Lavandula x intermedia |
| RS protein |
is |
chloroplast-targeted protein |
Oryza sativa |
| (NPC1, AT1G07230) |
contains |
signal peptide |
Arabidopsis thaliana |
| plant β-adaptins |
have been tentatively localized at |
plasma membrane |
|
| SCAMPs |
have been localized in |
both TGN and recycling endosomes |
|
| GSTT proteins from rice |
have |
C-terminal motifs for peroxisomal targeting |
Oryza sativa |
| GSTT proteins from soybean |
have |
C-terminal motifs for peroxisomal targeting |
Glycine max |
| OsHXK7 |
has experimentally determined |
sub-cellular localization |
Oryza sativa |
| latent dual targeting |
could be the case for |
more, and maybe many, precursor proteins |
|
| (ABCD1, ACN2, AtABCD1, CTS, PED3, PXA1, AT4G39850) region |
seems to contain |
targeting information for sub-Golgi localization |
|
| imported proteins in chloroplasts |
are further targeted to |
inner envelope, thylakoid membrane, or thylakoid lumen |
|
| site-directed mutagenesis exchanging cysteine for glycine at position 12 |
impaired |
localization of the protein to the PM |
Arabidopsis thaliana |
| (54CP, CPSRP54, FFC, SRP54CP, AT5G03940) (CPFTSY, FRD4, AT2G45770) and (ALB3, AT2G28800) proteins |
are widespread in |
all algae, including red algae, haptophytes, and the Stramenopila, Alveolata, and Rhizaria (SAR) clade |
|
| WLL1 protein |
is |
chloroplast-targeted protein |
Oryza sativa |
| signal recognition particle (SRP) protein SRP72 in endosperm |
is highly accumulated at |
20–26 days after anthesis (DAA) |
Triticum aestivum |
| predicted transit peptides |
suggested targeting to |
chloroplasts or mitochondria |
|
| recruitment of a specific annexin in a particular membrane |
is proposed to be dependent on |
post-translational modification |
|
| identity of compartment labelled by EYFP–AtPK7/ (GPK1, AT3G17420) |
needs to be addressed |
future studies |
Arabidopsis thaliana |
| one CKX per plant genome |
lacks |
translocation signal |
|
| MITS1 (Mitochondrial-Targeting Signal 1) with W361A mutation |
is redistributed to |
endoplasmic reticulum (ER) and Golgi apparatus |
Arabidopsis thaliana |
| (NPC3, AT3G03520) |
lacks |
signal peptide |
Arabidopsis thaliana |
| WLL1-GFP fusion protein |
localizes to |
chloroplasts |
Oryza sativa |
| (NPC2, AT2G26870) |
contains |
signal peptide |
Arabidopsis thaliana |
| CsaPT1 and CsaPT4 |
are |
plastid-localized |
Cannabis sativa |
| Most of the chloroplast proteins |
are targeted to |
a specific compartment within the chloroplast |
|
| different initiation sites |
result in proteins targeted to |
mitochondria |
Arabidopsis thaliana |
| C-terminally appended YFP |
may be masking |
potential targeting signals in the cytosolic tail of TIP3 |
Arabidopsis thaliana |
| nuclear-encoded organelle proteins |
carry |
cleavable amino-terminal extensions (presequences or transit peptides) |
|
| weak but significant YFP-fluorescence in transformed cells |
is observed to co-localize with |
autofluorescence of chlorophyll |
Pisum sativum |
| ST–CTS region |
confers targeting to |
later Golgi sub-compartment |
|
| AtFIS1 proteins containing the corresponding domain plus a few extra amino acids upstream (i.e. YFP–FIS1 TMD+CE) |
target |
nucleus |
Arabidopsis thaliana |
| diK motif and other basic residues at C-terminal end of Arabidopsis (EMB173, FIS1, MEA, SDG5, AT1G02580) |
are involved but not critical in |
peroxisomal targeting of Arabidopsis (EMB173, FIS1, MEA, SDG5, AT1G02580) proteins |
Arabidopsis thaliana |
| (AtNPC4, NPC4, AT3G03530) |
lacks |
signal peptide |
Arabidopsis thaliana |
| multiple steps in targeting to inner envelope and thylakoid membranes |
include |
sorting in the stroma |
|
| lcy-β2 protein from Hybrid 1B |
contained |
predicted plastid transit peptide of 71 amino acids |
Carica papaya |
| C-terminal segment |
may not be essential for |
plant mitochondrial targeting |
Arabidopsis thaliana |
| peroxisomal targeting |
cannot be predicted with sufficient accuracy |
computational prediction |
|
| advances in protein targeting mechanisms |
have been made |
protein targeting mechanisms |
|
| N-terminal bipartite targeting sequences with conserved ASAFAP motif |
is consistent with |
stromal location |
Phaeodactylum tricornutum |
| transit peptide |
ends with |
conserved R/K-T/A-A/Q motif at positions 51–53 |
Triticum aestivum |
| chloroplast transit peptide (cTP) sequences of CRTR-B1 and CRTR-B2 |
shared only 56% similarity |
chloroplast transit peptide (cTP) sequences |
Solanum lycopersicum |
| (HEC2, AT3G50330) |
is directly targeted by |
CONSTITUTIVELY PHOTOMORPHOGENIC1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) |
|
| some other plant and algal PDATs |
have |
distinct subcellular location |
|
| hFIS1 protein lacking the last five amino acids at the C-terminal end (SKSKS) |
were diffused in |
cytosol |
|
| transmembrane domain (TMD) of human (EMB173, FIS1, MEA, SDG5, AT1G02580) (hFIS1) |
is essential for |
mitochondrial and peroxisomal targeting of hFIS1 |
Homo sapiens |
| DcEXPA2 protein |
contains |
signal peptide sequence |
Dianthus caryophyllus |
| nature of mature protein |
can also affect |
targeting properties of pre-sequence |
|
| dual-targeting of proteins |
is |
unexpected finding |
|
| C-terminal tail of human (EMB173, FIS1, MEA, SDG5, AT1G02580) (hFIS1) |
is necessary and sufficient for |
peroxisomal and mitochondrial targeting |
Homo sapiens |
| fusion protein with N-terminal EYFP and (AAE14, AT1G30520) |
indeed targeted |
plant peroxisomes |
|
| γ-gliadin |
lacks |
endogenous targeting signals |
Triticum aestivum |
| (HCC1, AT3G08950) protein |
contains |
mitochondrial import sequence |
Arabidopsis thaliana |
| exchange of the essential histidine residue to valine (H20→V) |
was predicted to render |
putative PTS2 dysfunctional |
Arabidopsis thaliana |
| peroxisomal matrix proteins |
are generally targeted to matrix by |
cleavable PTS2 nonapeptide |
|
| RS-GFP fusion protein |
localizes to |
chloroplasts |
Oryza sativa |
| targeting to inner envelope and thylakoid membranes |
requires |
multiple steps |
|
| (FIS1B, AT5G12390) |
was recruited to peroxisomes when co-overexpressed with |
PEX11 protein |
Arabidopsis thaliana |
| (ATPTS, PANC, PTS, AT5G48840) peptides and auxiliary or essential targeting elements |
have not yet been precisely defined |
peroxisomal targeting prediction |
|
| chloroplast proteome analysis |
includes |
sub-organelle protein localization for plastoglobules |
|
| small region at the extreme C-terminus |
is not essential for |
peroxisomal targeting in Arabidopsis |
Arabidopsis thaliana |
| polytopic membrane protein |
have |
uncommon peculiarity of species-dependent sorting |
Arabidopsis thaliana; Saccharomyces cerevisiae |
| (BIGYIN, FIS1A, AT3G57090) and (FIS1B, AT5G12390) |
are dual-targeted to |
peroxisomes and mitochondria |
Arabidopsis thaliana |
| TargetP and Predotar signal peptide prediction algorithms |
predict that |
(DRT100, AT3G12610) protein is targeted to the secretory pathway |
Arabidopsis thaliana |
| alternative N-terminal processing of pFNRI |
is important for |
thylakoid targeting |
Triticum aestivum |
| C-terminal full-length fusion protein (AAE14–EYFP) |
localized to |
chloroplasts |
Arabidopsis thaliana |
| regulation and possible species specificity of dual targeting of (AAE14, AT1G30520) |
needs to be |
addressed in future studies |
higher plants |
| YFP–FIS1B Δ166–167 |
was deleted for |
last two amino acids (RS) of (FIS1B, AT5G12390) |
Arabidopsis thaliana |
| putative transit peptide in both BnHO1 and (ATHO1, GUN2, HO1, HY1, HY6, TED4, AT2G26670) |
supports |
BnHO1 is counterpart of Arabidopsis (ATHO1, GUN2, HO1, HY1, HY6, TED4, AT2G26670) gene |
Brassica napus; Arabidopsis thaliana |
| YFP–FIS1A and YFP–FIS1B fusion proteins |
are dual-targeted to |
peroxisomes and mitochondria |
Arabidopsis thaliana |
| (ATMSH1, CHM, CHM1, MSH1, AT3G24320) (renamed ) |
is targeted to |
chloroplasts |
Arabidopsis thaliana |
| (EMB173, FIS1, MEA, SDG5, AT1G02580) orthologs in diverse species |
contain conserved as well as unique features in |
targeting mechanisms |
|
| multiple steps in targeting to inner envelope and thylakoid membranes |
include |
translocation across the envelope membranes |
|
| reversibly glycosylated polypeptides (RGPs) |
do not possess |
signal peptide |
|
| Prunus persica protein |
contains |
stretch of hydrophobic residues near the N-terminus |
Prunus persica |
| loss of At GABA-T's mitochondria targeting ability |
was due to |
removal of N-terminal pre-sequence |
Arabidopsis thaliana |
| TMD alone |
can be sufficient for |
targeting in type I membrane proteins |
|
| (ATPTS, PANC, PTS, AT5G48840) peptides |
have been classified as |
major (ATPTS, PANC, PTS, AT5G48840) peptides |
|
| EYFP–AAE14 |
permitted |
C-terminal tripeptide of (AAE14, AT1G30520) (SSL>) to function as a subcellular targeting signal |
Arabidopsis thaliana |
| EYFP extended by C-terminal 10 residues of (ATPK7, D6PKL3, AT3G27580) (GPK1, AT3G17420) |
remained |
cytosolic |
Arabidopsis thaliana |
| BSP |
plays the role of |
a signal peptide in plants |
Zea mays; Arabidopsis thaliana |
| TCHQD |
has |
unknown targeting signal |
Arabidopsis thaliana |
| short basic segment at C-terminal end of human (EMB173, FIS1, MEA, SDG5, AT1G02580) (hFIS1) |
is essential for |
mitochondrial and peroxisomal targeting of hFIS1 |
Homo sapiens |
| membrane proteins destined for the mitochondria |
have fewer |
hydrophobic transmembrane segments |
|
| OsCEST and (AtCEST, CEST, Y3IP1, AT5G44650) |
contain |
transit peptides in their N-terminals |
Oryza sativa; Arabidopsis thaliana |
| GR2-GFP |
is localized to |
plastids |
Nicotiana tabacum |
| N-terminal extension of MITS1 |
contains |
cryptic signal for protein targeting to secretory pathway |
|
| signal recognition particle (SRP) protein SRP72 |
shows high abundance at |
12–20 days after anthesis (DAA) |
Triticum aestivum |
| ETR-truncated (XTH29, AT4G18990) protein |
never reaches |
final destination (cell wall) |
Arabidopsis thaliana |
| AtFIS1 proteins missing the corresponding segment at the extreme C-terminus |
are still largely localized to |
peroxisomes |
Arabidopsis thaliana |
| YFP–FIS1A CT and YFP–FIS1B CT |
showed punctate fluorescent signals largely co-localized with |
CFP–PTS1 |
Nicotiana tabacum |
| (ATTSPO, TSPO, AT2G47770) |
is switching |
sorting mode in a species-dependent manner |
Arabidopsis thaliana; Saccharomyces cerevisiae |
| At-A/N-InvA |
has targeting signal for mitochondrial localization in |
N-terminal part of the protein |
Arabidopsis thaliana |
| targeting domain of (ATGR2, EMB2360, GR, GR2, MIAO, AT3G54660) |
may convey |
mitochondrial and/or plastidial localization |
Arabidopsis thaliana |
| (AtSCAMP1, SC3, SCAMP1, AT1G61250) |
has been identified in |
tobacco BY-2 cells |
Nicotiana tabacum |
| OsCAS |
is |
sole sequence encoding protein predicted to be localized to mitochondria |
Oryza sativa |
| N-terminal targeting peptides |
direct |
(DHAR, AT1G19550) class members to the plastid/mitochondrion |
Arabidopsis thaliana |
| stop-transfer pathway |
integrates substrate proteins into |
IEM during protein translocation |
|
| five putative homologues of RecA |
are predicted to be localized in |
mitochondria and chloroplasts |
Arabidopsis thaliana |
| SSL> |
is |
PTS1 of (AAE14, AT1G30520) |
Arabidopsis thaliana |
| (AAE14, AT1G30520) |
is |
dually targeted to both chloroplasts and peroxisomes |
higher plants |
| GFP with first 120 residues of (AAE14, AT1G30520) appended to N-terminus |
localized to |
chloroplasts |
Arabidopsis thaliana |
| chloroplast proteome analysis |
includes |
sub-organelle protein localization for the stroma |
|
| maize granule-bound glycogen synthase |
target |
LT-B to the plastids |
Zea mays |
| N-terminus of Solanum lycopersicum GABA transaminase 1 (Sl GABA-T1) |
contains molecular targeting information that is both necessary and sufficient for |
proper localization to mitochondria |
Solanum lycopersicum |
| chloroplast and plant mitochondrial proteins |
have similar |
targeting sequences |
|
| hFIS1 protein lacking the last five amino acids at the C-terminal end (SKSKS) |
failed to localize to |
peroxisomes |
|
| intense signal from GmFAD7 protein bands in chloroplasts |
is consistent with |
chloroplastic localization of (AtFAD7, FAD7, FADD, AT3G11170) protein |
Glycine max |
| (APAO, ATPAO1, PAO1, AT5G13700) |
is suggested to have |
cytosolic localization |
Arabidopsis thaliana |
| (MSL2, AT5G10490) and (MSL3, AT1G58200) |
comprise |
N-terminal chloroplast transit peptide |
Arabidopsis thaliana |
| Cpr4 |
contains |
long amino-terminal signal peptide |
Saccharomyces cerevisiae |
| alanine residue in position 361 |
influences |
targeting properties of N-terminal sequence |
tobacco |
| (ATGSTZ1, AtMAAI, GST18, GSTZ1, MAAI, AT2G02390) (GSTL1, AT5G02780) (GSTL2, AT3G55040) (GSTL3, AT5G02790) and DHARs 1–3 |
lack |
N-terminal targeting peptides |
Arabidopsis thaliana |
| ZmXTH1 |
possesses |
N-terminal signal peptide |
Zea mays |
| Arabidopsis thaliana mitochondrial-targeting signal 1 (MITS1) protein |
successful targeting to mitochondria is influenced by |
N-terminal extension serving as a targeting peptide |
Arabidopsis thaliana |
| recruitment of a specific annexin in a particular membrane |
is proposed to be dependent on |
membrane oxidation |
|
| (ATPK3, PK3, AT5G08160) |
is indicated to be |
nuclear-targeted |
Arabidopsis thaliana |
| Arabidopsis thaliana mitochondrial-targeting signal 1 (MITS1) protein |
successful targeting to mitochondria is influenced by |
domains in the full-length protein |
Arabidopsis thaliana |
| mature LT-B protein |
has no |
targeting ability for the secretory system |
Zea mays; Arabidopsis thaliana |
| MITS1 1–11 |
is insufficient to target |
YFP to organelles efficiently |
tobacco |
| OsCAS–YFP protein |
mainly targets |
mitochondria |
Arabidopsis thaliana |
| predicted C-terminal tripeptide of (E-COAH-2, ECHIA, AT4G16210) (SKL>) |
is |
PTS1 of (E-COAH-2, ECHIA, AT4G16210) |
Arabidopsis thaliana |
| deletion of the putative N-terminal targeting domain of NS/ (DHNS, ECHID, AT1G60550) |
resulted in |
shortened fusion protein (NS/ECHIdΔN–EYFP) remained cytosolic |
Allium cepa |
| ARM repeat composition in (ARABIDILLO-1, ARABIDILLO1, FBX5, AT2G44900) and (ARABIDILLO-2, ARABIDILLO2, AT3G60350) |
appears to allow for |
nuclear targeting in an NLS-independent manner |
Arabidopsis thaliana |
| PSORT prediction |
favoured |
plastidial location of (ATGR2, EMB2360, GR, GR2, MIAO, AT3G54660) |
Arabidopsis thaliana |
| 51-amino acid N-terminal extension of (ATGR2, EMB2360, GR, GR2, MIAO, AT3G54660) |
contains |
targeting domain |
Arabidopsis thaliana |
| N-terminal 46 amino acids of At (GABA-T, HER1, POP2, AT3G22200) |
is |
sufficient for mitochondrial localization |
Arabidopsis thaliana; Nicotiana tabacum |
| 12–39 amino acid region of MITS1 |
can function as |
promiscuous targeting signal for microsomal and mitochondrial membranes |
tobacco |
| Theta class GSTs in other plants |
have C-terminal motifs that are likely to result in |
peroxisomal targeting |
|
| signal peptide of CaChitIV |
targets |
CaChitIV protein to the ER |
Nicotiana benthamiana |
| YKT6 |
targeting is dependent on |
N-terminal longin domain |
|
| mitochondrion- and plastid-localized (GABA-T, HER1, POP2, AT3G22200) isoforms |
have targeting mediated by |
predicted N-terminal presequences |
Solanum lycopersicum |
| GSTTs in animals and fungi |
have no such obvious targeting sequences |
peroxisomal targeting sequences |
|
| (COR413-TM1, COR413IM1, COR414-TM1, DEG25, AT1G29395) protein |
is |
model substrate |
|
| multiple transmembrane segments |
may be required for efficient targeting of |
polytopic proteins to the IEM |
|
| first 45 amino acids of LeCDJ1 |
constitute |
plastid target signals |
Solanum lycopersicum |
| transmembrane segment |
plays key roles in determining |
IEM localization of single-spanning IEM proteins |
|
| subcellular localization of LT-B in plant cells |
is determined by |
presence or absence of a signal sequence such as BSP or ZSP |
Zea mays; Arabidopsis thaliana |
| lambda class (GSTL2, AT3G55040) |
contain |
unambiguous N-terminal targeting peptides |
Arabidopsis thaliana |
| 12 hydrophobic membrane-spanning domains and preponderance of positively charged amino acid residues on the cytoplasmic face of BicA |
follow |
positive-inside rule |
|
| YFP–FIS1A TMD+CE construct |
contained |
last 32 amino acids of (BIGYIN, FIS1A, AT3G57090) |
Arabidopsis thaliana |
| (AAE14, AT1G30520) |
is |
dually targeted to both plastids and peroxisomes |
Arabidopsis thaliana |
| last 26 amino acids of hFIS1 |
were successfully targeted to |
peroxisomes and mitochondria |
|
| (FIS1B, AT5G12390) |
was recruited to |
peroxisomes |
Arabidopsis thaliana |
| cTP of Ipomoea CHYB |
shared 56% and 59% identity with |
cTP sequences of tomato CRTR-B1 and CRTR-B2 |
Ipomoea sp.; Solanum lycopersicum |
| Csβ-LCY2 containing predicted transit peptide |
suggests |
similar location to β-LCY1 |
Citrus sinensis |
| predicted secondary structure of N-terminal sequence |
suggests |
targeting of MITS1 to mitochondria |
|
| GSTTs in Arabidopsis |
were expressly targeted to |
peroxisomes or nucleus |
Arabidopsis thaliana |
| C-terminal SKM or SKI motifs |
would be anticipated to target |
peroxisome |
Arabidopsis thaliana |
| (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) proteins |
are targeted to |
chloroplast |
Arabidopsis thaliana; Oryza sativa |
| GPI anchoring and release |
may confer |
localized or polarized targeting |
|
| N-terminus region |
is location of |
mitochondrial targeting sequence |
Arabidopsis thaliana |
| leaderless pre-sequence (lacking first 11 amino acids) |
directed YFP protein fusions to |
endoplasmic reticulum (ER) |
Arabidopsis thaliana |
| (ATGSTU12, GSTU12, AT1G69920) polypeptide sequence |
revealed |
N-terminal extension of 25 amino acid residues containing a putative nuclear localization signal (KKRKK) |
Arabidopsis thaliana |
| most of the GSTs tested |
lack |
obvious targeting sequences |
Arabidopsis thaliana |
| IEM proteins |
utilize |
two distinct pathways for their targeting to the IEM |
|
| specialized pathway for polytopic membrane proteins in chloroplasts |
remains unclear whether |
it exists |
|
| (ATCDSP32, CDSP32, TRXL1, AT1G76080) |
is |
chloroplast-targeting protein |
Nicotiana benthamiana |
| N-terminal 45 amino acids of (ATGR2, EMB2360, GR, GR2, MIAO, AT3G54660) |
contains |
targeting information |
Arabidopsis thaliana |
| ER marker (ER cherry) |
contains |
a red fluorescent protein fused to the signal peptide of the Arabidopsis thaliana wall-associated kinase 2 and an HDEL motif for retention in the ER |
Arabidopsis thaliana |
| (CCD4, NCED4, AT4G19170) enzymes |
show |
targeting sequence |
|
| mutation of tryptophan residue at position 361 (W361A) |
resulted in redistribution of |
MITS1 (Mitochondrial-Targeting Signal 1) |
Arabidopsis thaliana |
| chimeric signal sequences |
may retain ability for |
ER and mitochondria targeting |
|
| (GSTL2, AT3G55040) |
has |
N-terminal targeting peptide |
Arabidopsis thaliana |
| RePRPs |
have |
standard signal peptide in the N-terminal region |
Oryza sativa |
| mature tpATS1-DAGK |
has potentially inserted into |
inner leaflet of inner envelope or outer leaflet of thylakoid membranes |
Arabidopsis thaliana |
| ROOT AND POLLEN ARFGAP (AGD10, MEE28, RPA, AT2G35210) |
localizes via |
79 C-terminal amino acids |
Arabidopsis thaliana |
| long form of BbrizExoV protein |
localizes to |
nucleus of onion epidermal cells |
Brachiaria brizantha; Allium cepa |
| N-terminal region of (nMAT4, AT1G74350) transcript |
harbors |
mitochondrial and plastid targeting signals |
Arabidopsis thaliana |
| (nMAT4, AT1G74350) |
demonstrates several unusual features including |
presence of two potential initiation codons encoding plastid or mitochondrial forms |
Arabidopsis thaliana |
| role of the transmembrane domain for targeting of ST |
is less clear for |
ST |
plants |
| monocot sequences |
show |
dual localization |
|
| signal peptide sequence of SP-SUBEX-C57Y |
replaced by |
cytoplasmic-transmembrane and stem (CTS) region from cis-Golgi-resident α-mannosidase I (MANIB, MNS1, AT1G51590) |
|
| (ABCD1, ACN2, AtABCD1, CTS, PED3, PXA1, AT4G39850) regions from GCSI, (MANIB, MNS1, AT1G51590) and ST |
have been used to target proteins to |
ER and Golgi apparatus |
|
| (COR413-TM1, COR413IM1, COR414-TM1, DEG25, AT1G29395) |
does not utilize |
soluble intermediate for its targeting to the IEM |
|
| (MSL2, AT5G10490) and (MSL3, AT1G58200) |
encode proteins with |
N-terminal chloroplast transit sequences |
Arabidopsis thaliana |
| ShMTP1 expressed in Arabidopsis |
is localized to |
tonoplast |
Arabidopsis thaliana |
| DcEXPA1 protein |
contains |
signal peptide sequence |
Dianthus caryophyllus |
| (ARABIDILLO-1, ARABIDILLO1, FBX5, AT2G44900) and (ARABIDILLO-2, ARABIDILLO2, AT3G60350) |
carry |
nuclear localization signal (NLS) |
Arabidopsis thaliana |
| The phi class (ATGSTF5, ATGSTF8, GST6, GSTF8, AT2G47730) |
contains |
a chloroplast-targeting peptide |
Arabidopsis thaliana |
| requirement of multiple transmembrane segments for IEM targeting of polytopic membrane proteins |
will make definition of the physical characteristics of any IEM targeting signal difficult to define |
physical characteristics of IEM targeting signal |
|
| (ANU10, AT1G28530) protein with transmembrane domain |
suggests that these proteins are |
anchored to chloroplast membranes |
Arabidopsis thaliana |
| insertion/folding and orientation of BicA in the inner envelope membrane (IEM) |
is expected to be governed by |
12 hydrophobic membrane-spanning domains and preponderance of positively charged amino acid residues on the cytoplasmic face of the transporter |
|
| CK2 α4 subunit |
is targeted to |
chloroplast |
Arabidopsis thaliana |
| (APG1, E37, IEP37, VTE3, AT3G63410) |
is |
substrate of stop-transfer pathway |
|
| GFP fused to (PDE320, TGD4, AT3G06960) |
may sequester or expose |
signal peptide |
|
| small portion of polytopic IEM proteins |
may play a role in |
their targeting |
|
| targeting of (COR413-TM1, COR413IM1, COR414-TM1, DEG25, AT1G29395) to the inner envelope membrane of chloroplasts |
involves |
multiple transmembrane segments |
|
| thylakoid membrane |
is |
default destination for hydrophobic membrane proteins within chloroplasts if they do not have the IEM insertion signal |
|
| polytopic IEM proteins |
also possess |
cleavable transit peptide |
|
| two pathways |
have been analyzed in detail using |
proteins carrying a single transmembrane domain |
|
| two glycosyl hydrolase family 17 proteins ( (AT4G34480) and (AT5G58090) ) |
are |
several Arabidopsis proteins with a highly hydrophobic C-terminal extension |
Arabidopsis thaliana |
| N–glycan analysis |
allows discrimination between |
ER retention and Golgi targeting |
|
| isocitrate lyase in Chlamydomonas |
lacks |
any known targeting sequence |
Chlamydomonas |
| SUBSTANDARD STARCH GRAIN4 (SSG4) protein |
is localized to |
amyloplasts |
Oryza sativa |
| cysteine protease identified in yeast two-hybrid |
contained |
vacuolar sorting signal |
|
| alternative translation initiation in eukaryotes |
regulates |
trafficking of different isoforms to various cellular compartments |
|
| 16-amino acid (16–aa) peptide aptamer (PAP) |
targets |
rice (HAP1, MAGO, MEE63, AT1G02140) proteins |
Oryza sativa |
| Arabidopsis (ROC7, AT5G58710) |
has been localized to |
ER |
Arabidopsis thaliana |
| N-terminal signal peptide |
guides its insertion and translocation into |
the ER lumen |
|
| N-terminal extension of MITS1 |
functions alone as |
efficient targeting signal to mitochondria |
tobacco |
| peptide 12–39 |
maintained |
similar cluster of cationic amino acids |
|
| omega-class GSTs in Saccharomyces cerevisiae |
are known to be targeted to |
peroxisomes |
Saccharomyces cerevisiae |
| ParA |
has no obvious |
localization signal |
Nicotiana tabacum |
| BicA incorporation into chloroplast envelope and thylakoid membranes |
contrasts with |
transplastomic expression of Arabidopsis IEM (ATTIC40, PDE120, TIC40, AT5G16620) protein that specifically integrates into IEM |
Nicotiana tabacum; Arabidopsis thaliana |
| (COR413-TM1, COR413IM1, COR414-TM1, DEG25, AT1G29395) |
does not utilize |
soluble intermediate for targeting to the IEM |
|
| six genes among the 20 candidates |
encode |
chloroplast-localized proteins |
Arabidopsis thaliana |
| dual targeted proteins |
have significant increase of |
arginine |
|
| shortest sequence capable of conferring dual targeting of GFP to mitochondria and chloroplasts |
is |
60 amino acids long |
|
| ProTerNyc software |
predicts |
signal peptide length |
|
| purified amyloplasts during grain development |
would represent ideal material to assess |
localization of A3OE protein within endosperm |
Triticum aestivum |
| (DCC1, AT5G50100) |
contains |
mitochondrial signal sequence |
Arabidopsis thaliana |
| two thioredoxin-like proteins in Medicago truncatula |
are targeted to |
endoplasmic reticulum |
Medicago truncatula |
| dually targeted proteins |
have low content in |
alanine residues |
|
| rat microsomal ALDH C-terminal domain |
is responsible for |
posttranslational targeting to the ER |
Rattus norvegicus |
| amino acid distribution |
is similar up to about 90 amino acids in |
dual targeting peptides (dTPs) |
Arabidopsis thaliana |
| OsARG protein |
contains |
predicted mitochondrial targeting peptide at N-terminal end |
Oryza sativa |
| code region (amino acid (aa) 60-198) of Mtm1p |
plays an important role in |
localization of the protein to the mitochondria |
Arabidopsis thaliana |
| uncleaved signal-anchor sequence |
directs |
binding of nascent protein to ER |
|
| chloroplasts |
accumulate |
soluble intermediate in the stroma during targeting of the (ATTIC40, PDE120, TIC40, AT5G16620) protein |
|
| Three clones from high Cu condition |
encode |
(ATCCS, AtHMP03, CCS, AT1G12520) precursor with functional chloroplast transit sequence |
Arabidopsis thaliana |
| AtRad52-1A-NT construct |
lacks |
transit peptide |
Arabidopsis thaliana |
| transit peptide |
is necessary and sufficient for |
targeting the precursor into chloroplasts |
|
| AtCURT1A |
harbors |
putative N-terminal chloroplast transit peptide |
Arabidopsis thaliana |
| nuclear localization signal (NLS) derived from Simian Virus 40 (SV40) |
is used to restrict |
MS2-GFP to the nucleus |
|
| (CRR6, AT2G47910) |
has |
cTP predicted as mTP |
Arabidopsis thaliana |
| AtMSRB2 |
encodes plastidial isoform |
plastidial protein |
Arabidopsis thaliana |
| (ATSYP73, SYP73, AT3G61450) transmembrane domain |
is simply required to anchor |
cytosolic domain to the ER |
Arabidopsis thaliana |
| targeting pathways |
are involved in |
targeting of proteins within the interior of chloroplasts |
|
| (CPR5, HYS1, OLD1, AT5G64930) |
has amino-terminal signal peptide directing to |
ER |
Saccharomyces cerevisiae |
| signal peptides |
direct |
(ATCDS1, CDS1, AT1G62430) CDS2.1 and CDS3 to the ER membrane |
Arabidopsis thaliana |
| signal-anchor sequence (TM1 and TM2) |
targets |
(ATTIC110, TIC110, AT1G06950) protein to the inner membrane |
|
| Arabidopsis thaliana (EXOVL, AT5G60370) protein |
is exception to |
single localization pattern of dicot (EXOV, AT3G57110) proteins |
Arabidopsis thaliana |
| Arabidopsis enzyme |
has |
subcellular localization |
Arabidopsis thaliana |
| TargetP analysis |
predicted |
presence of a transit peptide |
Zea mays |
| BoVML1 |
is targeted to |
chloroplasts |
Brassica oleracea var. capitata |
| ChloroP prediction |
favoured |
plastidial location of (ATGR2, EMB2360, GR, GR2, MIAO, AT3G54660) |
Arabidopsis thaliana |
| peptide 12–39 |
capable of targeting |
YFP to the mitochondria |
tobacco |
| microsomal signal sequence |
may be cleaved to activate |
mitochondrial targeting signal |
|
| OsCAS transit peptide |
has been identified targeting |
mitochondria |
Oryza sativa |
| AtRad52-1A construct |
contains |
AtRad52-1A wild-type nuclear localization signal |
Arabidopsis thaliana |
| (AtTK1b, TK1b, TK2, AT5G23070) |
accumulated in |
plastids and mitochondria in other assays |
Arabidopsis thaliana |
| targeting pathway of polytopic IEM proteins |
is distinct from |
targeting pathway of monotopic IEM proteins |
|
| Type B HXKs |
specify targeting to |
mitochondria |
|
| cpSRP pathway |
targets proteins to |
thylakoid membranes |
|
| diatoms |
lack |
(CAO, CPSRP43, AT2G47450) homologs |
|
| chloroplasts |
is the organelle where |
(ATICS1, EDS16, ICS1, SID2, AT1G74710) is targeted |
Arabidopsis thaliana |
| FtsZ3 |
is dually targeted to |
plastids and cytosol |
Physcomitrella patens |
| moderate hydrophobicity and net positive charge of mitochondrial Tom20 receptor |
evades |
SRP-dependent ER targeting |
|
| (AtTK1b, TK1b, TK2, AT5G23070) |
might be located in |
both organelles and not exclusively in the mitochondria |
Arabidopsis thaliana |
| dual targeting of proteins to organelles |
can rely on |
production of two different polypeptides from single gene through alternative transcription or translation initiation sites |
|
| Most plant PPR proteins |
contain |
N-terminal signals that target them to energy-producing organelles |
Land plants |
| peroxisome membrane-bound ascorbate peroxidase |
has |
membrane peroxisome-targeting signal (mPTS) |
|
| first part of cleavable targeting information of (MAR1, TOC75, TOC75-III, AT3G46740) |
is |
stroma targeting sequence |
|
| 6-phosphogluconolactonase 3 (EMB2024, PGL3, AT5G24400) |
is predicted to have |
peroxisome-targeting signal (PTS1) |
Arabidopsis thaliana |
| N–terminal Golgi-targeting region of (CGL, CGL1, GNTI, AT4G38240) |
contributes to |
sub-Golgi localization |
|
| peroxisomal citrate synthase and malate synthase enzymes |
have |
peroxisomal targeting signal at the C-terminus (PTS1) or N-terminus (PTS2) |
|
| longer form of BbrizExoV |
is directed to |
nucleus |
Brachiaria brizantha |
| (ATSYP22, ATVAM3, SGR3, SYP22, VAM3, AT5G46860) |
targets foreign molecules to |
vacuolar membrane |
Arabidopsis thaliana |
| ptATS2b |
contains |
classical signal peptide (amino acids 1-21) |
Phaeodactylum tricornutum |
| modified crtB protein with plant plastid targeting sequence fused to N-terminus |
results in |
plastid targeting |
|
| transgenic alleles |
target |
respective organelles |
Glycine max |
| DAGK similarly targeted in tobacco with transit peptide of (AtSSU, GGPPS12, GGR, SSU, AT4G38460) |
was found to be inserted in |
both inner envelope and thylakoid membranes |
Nicotiana tabacum |
| unmodified crtB protein |
contains |
cryptic plastid targeting sequence |
Pantoea ananatis |
| CsZCD enzyme |
did not contain |
typical cleavable transit peptide |
|
| (NAI2, AT3G15950) |
has |
signal peptide |
Arabidopsis thaliana |
| mPTS |
is crucial for |
peroxisome membrane localization of NbAPX3-1 |
Nicotiana benthamiana |
| 2-Cys PRX-A |
is targeted to |
chloroplasts |
Arabidopsis thaliana |
| (ML3, AT5G23820) |
contains |
N-terminal signal peptide |
Arabidopsis thaliana |
| single construct fusing bacterial protein to Rubisco small subunit N-terminal peptide |
targets |
Escherichia coli DAG kinase (DAGK) |
Nicotiana tabacum |
| PNC proteins |
are the only members targeted to |
plant peroxisomes |
Arabidopsis thaliana; Glycine max |
| ST–CTS region |
targets to later Golgi sub-compartment than |
XylT–CTS region |
|
| Vps74p protein |
has been found to directly bind to |
conserved motif in the cytoplasmic tail of glycosyltransferases |
Saccharomyces cerevisiae |
| LTD- and CpSRP43-related proteins |
are probably restricted to |
the green lineage |
|
| coincident detection of membrane curvature and electrostatics |
provides |
signal for early endosome / trans-Golgi network (EE/TGN) targeting |
|
| transit peptide of translocon at outer envelope membrane of chloroplasts, 75 kD (tpTOC75) |
targets DAGK to |
inner leaflet of outer envelope membrane and outer leaflet of inner envelope membrane |
|
| transit peptide of Pt9029 |
is essential for directing |
Pt9029 localization to chloroplasts |
Nicotiana benthamiana |
| stromal targeting transit peptide of small subunit of Rubisco (SSU) |
targets E. coli DAGK to |
inner leaflet of inner chloroplast membrane and outer leaflet of thylakoid membranes |
Nicotiana tabacum |
| N-terminal signal peptide of (ML3, AT5G23820) |
may direct targeting to |
vacuole or secretory pathway |
Arabidopsis thaliana |
| (MAR1, TOC75, TOC75-III, AT3G46740) |
is unique among chloroplast outer envelope membrane proteins in that it has |
cleavable targeting information |
|
| N-terminus of nMAT4L |
contains |
mitochondrial targeting signal |
Arabidopsis thaliana |
| (F3'H, F3H, TT6, AT3G51240) |
lacks |
signal sequence for intracellular translocation to specific organelles |
Antirrhinum majus |
| proteins |
are transported into |
peroxisomes |
|
| class III peroxidases |
are targeted to |
vacuole |
|
| PPR proteins |
are targeted to |
mitochondria |
|
| (EMB2024, PGL3, AT5G24400) targeting to plastids or peroxisomes |
is mediated by |
C-terminal targeting signals |
|
| oligomerization of human (CGL, CGL1, GNTI, AT4G38240) |
is suggested to play a major role for |
Golgi retention |
mammals |
| N–terminal extensions present on each SlCPT gene |
are predicted to encode |
transit peptide |
Solanum lycopersicum |
| predicted transit peptide |
suggests |
possible plastid localization |
|
| SP-mRFP-TMD9 and SP-mRFP-SUBEX-C57Y-TMD9 ER localization |
suggests that |
additional domains from (AtTMN1, EMP12, TMN1, AT1G10950) are required for ER exit and Golgi retention |
|
| predicted transit peptide for plastid targeting of GmPTs |
when removed, resulted in |
GmPTs not confined to cytoplasm but observed in other subcellular compartments |
Glycine max |
| hydrophobic transmembrane region |
probably represents |
internal signal-recognition motif |
Zea mays |
| Arabidopsis chitinase (ATHCHIB, B-CHI, CHI-B, HCHIB, PR-3, PR3, AT3G12500) |
is one of |
several Arabidopsis proteins with a highly hydrophobic C-terminal extension |
Arabidopsis thaliana |
| live-cell imaging |
provides information on |
sub-Golgi targeting |
|
| absence of a (ATPTS, PANC, PTS, AT5G48840) sequence in a protein |
has been demonstrated in some cases to not prevent |
targeting to the peroxisome |
|
| CPLD49 |
has |
predicted amino-terminal chloroplast transit peptide |
Chlamydomonas reinhardtii |
| EHM-targeting signal (aa 20-30) |
is presented in |
N1 fragment |
|
| motif 11 |
spans |
putative signal peptide |
Arabidopsis thaliana |
| (OOP, TOP1, AT5G65620) |
has |
putative N–terminal signal peptide |
Arabidopsis thaliana |
| shorter form of BbrizExoV |
is directed to |
chloroplast |
Brachiaria brizantha |
| G6PDH1 targeting to peroxisomes |
is mediated by |
internal PTS1 |
|
| extraplastidial CDS proteins of Arabidopsis |
lack |
typical N-terminal targeting sequences |
Arabidopsis thaliana |
| some functional ssVSDs |
are also found in |
middle or at the C-terminus of the protein |
|
| binding of cytosolic proteins |
may mediate |
sub-Golgi localization |
|
| second, discrete signal |
is necessary for |
targeting to IEM and thylakoid membranes |
|
| (ASA1, BIG, CRM1, DOC1, LPR1, TIR3, UMB1, AT3G02260) cell wall targeting |
was confirmed in |
cell wall extracts after sequential washing of suspension-cultured wild-type (Col) cells |
Arabidopsis thaliana |
| N-terminal domain of Pescadillo (PES, AT5G14520) |
is required for |
nucleolar localization of Pescadillo (PES, AT5G14520) |
Nicotiana benthamiana; Arabidopsis; tobacco BY-2 cells |
| OsASL1.1 |
is localized in |
plastid |
Oryza sativa |
| transmembrane domain of mammalian N–glycan processing enzymes |
plays an important role for |
Golgi retention |
mammals |
| local concentration of PI(4,5)P2 at the PM |
is sufficient to drive |
PIP2-interacting proteins to PM |
Arabidopsis thaliana |
| SP-mRFP-TMD9 |
was attached the same |
(AtTMN1, EMP12, TMN1, AT1G10950) region |
|
| (emb1692, LEFKO, AT5G62990) |
is targeted to |
chloroplasts |
|
| 45-aa extra-terminal region (ETR) domain |
is necessary but not sufficient for |
correct targeting of (XTH29, AT4G18990) towards cell wall |
Arabidopsis thaliana |
| (NPC6, AT3G48610) |
contains |
signal peptide |
Arabidopsis thaliana |
| (AthCF1beta, ATPB, CF1beta, PB, ATCG00480) localization signal |
provides |
functional mitochondrial localization signal |
Arabidopsis thaliana |
| dicot (EXOV, AT3G57110) proteins |
show |
only one localization |
|
| chloroplast proteins |
use |
alternative chloroplast-targeting pathway involving endoplasmic reticulum (ER) and Golgi apparatus |
|
| SlCPT1–7 |
encode proteins with |
N-terminal targeting sequences |
Solanum lycopersicum |
| BbrizExoV |
might have |
dual localization |
Brachiaria brizantha |
| OHP1-sGFP and OHP2-sGFP chimeric proteins |
localize to |
chloroplasts |
Nicotiana tabacum |
| thioredoxins |
are targeted into |
plastids |
Phaeodactylum tricornutum |
| targeting peptide |
consists of average |
60 amino acids for chloroplastic targeting peptides |
Arabidopsis thaliana |
| ProTerNyc software |
allows prediction of |
signal peptide |
|
| NbAPX3-1 |
has |
one mPTS at its C-terminal |
Nicotiana benthamiana |
| DAGK fusion constructs |
include or do not include |
chloroplast-specific N-terminal targeting information |
|
| untargeted DAGK |
is expected to integrate into |
membranes accessible to cytosol, including chloroplast outer envelope |
|
| second part of cleavable targeting information of (MAR1, TOC75, TOC75-III, AT3G46740) |
is necessary to sort |
(MAR1, TOC75, TOC75-III, AT3G46740) to outer envelope membrane |
|