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photomorphogenesis

30832 relationships annotated with this phrase. Showing first 500 of 30832.
Source entity Relationship Target entity Species
(AtbZIP68, bZIP68, AT1G32150) is basic region/leucine zipper (AtbZIP, bZIP, AT1G68880) transcription factor Arabidopsis thaliana
(AtbZIP16, bZIP16, AT2G35530) is (AtbZIP, bZIP, AT1G68880) protein
AtBBX20, 21, and 22 are identified as essential cofactors of AtHY5 Arabidopsis thaliana
(VQ29, AT4G37710) (PIF1, PIL5, AT2G20180) double mutant is pronouncedly shorter than single mutants under far-red light/dark cycles or far-red light without Suc supplement Arabidopsis thaliana
gametangiophores are induced by supplementing standard growth conditions with continuous FR light Marchantia polymorpha
certain photomorphogenesis mutants have roots that appear green because chloroplasts have developed Arabidopsis thaliana
Ca2+ channel blocker affects de-etiolation of the seedling hypocotyl Arabidopsis thaliana
(AtbZIP68, bZIP68, AT1G32150) and (AtGBF1, GBF1, AT4G36730) competing out (AtbZIP16, bZIP16, AT2G35530) could induce initial expression of PhANGs
(SMAX1, AT5G57710) (AtMAX2, MAX2, ORE9, PPS, AT2G42620) seedlings suppressed longer hypocotyls in red light-grown (AtMAX2, MAX2, ORE9, PPS, AT2G42620) seedlings Arabidopsis thaliana
(AtGBF1, GBF1, AT4G36730) acts as negative regulator of RBCS expression
light directs shade avoidance
(HLH1, PAR1, AT2G42870) functions as photomorphogenesis promoting factor Arabidopsis thaliana
hypocotyl lengths of (HY3, OOP1, PHYB, AT2G18790) were longer than wild-type and ZFP3ox seedlings Arabidopsis thaliana
hypocotyls of (HY3, OOP1, PHYB, AT2G18790) /ZFP3ox seedlings were gradually shortened by increasing fluence rates of red light, similar to wild-type seedlings Arabidopsis thaliana
dark-grown YHB seedlings exhibit unique plastid morphology Arabidopsis thaliana
AtBBX28 and AtBBX29 interfere with AtHY5 binding to promoters of downstream genes Arabidopsis thaliana
(FAR1, AT5G22500) (FAR-RED IMPAIRED RESPONSE 1) was identified as key positive component in the phyA-mediated photomorphogenic pathway
GR24 promote responses to light Arabidopsis thaliana
(SMAX1, AT5G57710) fully restores cotyledonary petiole angle of (AtMAX2, MAX2, ORE9, PPS, AT2G42620) Arabidopsis thaliana
intron retention isoforms of B-BOX DOMAIN 22 (BBX22IR) have regulatory functions in photomorphogenic development
(AtGBF1, GBF1, AT4G36730) is basic region/leucine zipper (AtbZIP, bZIP, AT1G68880) transcription factor Arabidopsis thaliana
delicate interplay between (AtbZIP16, bZIP16, AT2G35530) (AtbZIP68, bZIP68, AT1G32150) and (AtGBF1, GBF1, AT4G36730) possibly promotes just the right amount of gene expression to avoid photooxidative damage during first light hours
combined effect of downregulation of other nuclear genes involved in photomorphogenesis contributes to attenuated expression of plastid encoded genes
dark-to-light transition seedlings face changes in redox status
(VQ29, AT4G37710) expression is down-regulated by light Arabidopsis thaliana
(AtMAX2, MAX2, ORE9, PPS, AT2G42620) regulates photomorphogenesis
ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) genetically and physically interacts with signaling components Arabidopsis thaliana
(AtbZIP, bZIP, AT1G68880) triple mutant observed downregulated LHCB expression compared with WT
dorsiventral polarity is determined by illumination, particularly red light Marchantia polymorpha
extensive transcriptional reprogramming drives morphological changes necessary to establish a green photosynthetically active seedling
intron retention isoforms of B-BOX DOMAIN 24 (BBX24IR) have regulatory functions in photomorphogenic development
light exposure triggers photomorphogenic development
activity of both repressors and activators is prerequisite to balance and coordinate gene expression between nucleus and plastids
Decreased Tiller Number 1 (DTN1) is required for light-induced axillary bud elongation
(SMAX1, AT5G57710) mutants have phenotype of enhanced seedling photomorphogenesis Arabidopsis thaliana
(AtbZIP68, bZIP68, AT1G32150) and (AtGBF1, GBF1, AT4G36730) possibly compete out (AtbZIP16, bZIP16, AT2G35530)
COP1-SPA1 heterocomplex targets for degradation (AtMYB18, LAF1, MYB18, AT4G25560) Arabidopsis thaliana
(HY3, OOP1, PHYB, AT2G18790) pro:: GUS transcriptional reporter transgene displays GUS expression in cotyledons, hypocotyls, and roots Arabidopsis thaliana
(AtBBX32, BBX32, EIP6, AT3G21150) represses seedling photomorphogenesis Arabidopsis thaliana
GOLDEN2-LIKE (GLK) have diverse roles in photomorphogenesis
(VQ29, AT4G37710) loss-of-function mutant exhibits decreased hypocotyl elongation under low-intensity far-red light Arabidopsis thaliana
vq29-1 mutant did not affect defects of (PIF1, PIL5, AT2G20180) mutant during deetiolation Arabidopsis thaliana
estradiol-dependent shortening of hypocotyls was also observed in transgenic seedlings overexpressing (ATZFP1, ZFP1, AT1G80730) (ZFP4, AT1G66140) (ZFP6, AT1G67030) and (ZFP7, AT1G24625) Arabidopsis thaliana
YHB / phyAphyB transgenic lines possess open apical hook Arabidopsis thaliana
smax1-1 max2-8 mutant exhibits increased cotyledon expansion Arabidopsis thaliana
pleiotropic photosignaling (AtMAX2, MAX2, ORE9, PPS, AT2G42620) mutant exhibits decreased light responses Arabidopsis thaliana
(AtMAX2, MAX2, ORE9, PPS, AT2G42620) mutants exhibit modified seedling photomorphogenesis Arabidopsis thaliana
Cotyledons of (SMAX1, AT5G57710) (AtMAX2, MAX2, ORE9, PPS, AT2G42620) seedlings are restored to wild-type size Arabidopsis thaliana
inhibition of hypocotyl growth by (HY3, OOP1, PHYB, AT2G18790) during deetiolation of young seedlings reaches saturation between 1 and 10 µmol m–2 s–1 of continuous red light
(ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) negative regulation of photomorphogenesis occurs in absence of light Arabidopsis thaliana
(HLH1, PAR1, AT2G42870) and (ADH2, ATGSNOR1, GSNOR, HOT5, PAR2, AT5G43940) overexpression promote seedling deetiolation Arabidopsis thaliana
(ZFP3, AT5G25160) overexpression could not reduce relative hypocotyl lengths in abi5-1 mutant background upon red light illumination Arabidopsis thaliana
Y276H mutant of (HY3, OOP1, PHYB, AT2G18790) (YHB) induces constitutive photomorphogenesis via faithful reconstruction of (HY3, OOP1, PHYB, AT2G18790) signaling pathways Arabidopsis thaliana
light directs phototropism
vq29-1 mutant did not affect seedling greening phenotype Arabidopsis thaliana
deetiolation of young seedlings during which PHYTOCHROME B (HY3, OOP1, PHYB, AT2G18790) physiological activity
hypocotyls of abi5-1/ZFP3ox seedlings were only 10% shorter than abi5-1 in white light Arabidopsis thaliana
(ABI5, AtABI5, DPBF1, GIA1, AT2G36270) is essential for light-dependent function of (ZFP3, AT5G25160) Arabidopsis thaliana
ein194 mutants in white light conditions displayed reduced chlorophyll content Brassica rapa
LONG HYPOCOTYL5 (HY5, TED 5, AT5G11260) promotes photomorphogenesis Arabidopsis thaliana
hypocotyl shortening in ZFP3ox plants was estradiol dependent, indicating that it is the result of (ZFP3, AT5G25160) overexpression Arabidopsis thaliana
ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) suppresses photomorphogenesis Arabidopsis thaliana
plant photomorphogenesis involves complex interplay between multiple light-sensing systems including multiple regulatory photoreceptors, photosynthetic pigments, and other photoprotective or photodynamic pigments
brassinosteroids (BRs) may modulate photomorphogenesis through synergetic regulation with other hormones
light-grown deetiolated seedlings display photosynthetically active chloroplasts
COP1-SPA1 heterocomplex targets for degradation (HY5, TED 5, AT5G11260) Arabidopsis thaliana
(ATZFP1, ZFP1, AT1G80730) is implicated in photomorphogenic responses Arabidopsis thaliana
NF-YC regulates photomorphogenesis
B-box (BBX) transcription factors genetically interact with ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) Arabidopsis thaliana
a peroxisome biogenesis protein can influence photomorphogenesis
(FHY2, FRE1, HY8, PHYA, AT1G09570) contributes to hypocotyl growth response in white light
aberrant vitamin B6 content correlates with light sensitivity Arabidopsis thaliana
htl mutants show retarded leaf expansion Arabidopsis thaliana
unphosphorylated Long Hypocotyl 5 (HY5, TED 5, AT5G11260) is less stable than phosphorylated Long Hypocotyl 5 (HY5, TED 5, AT5G11260)
suppression of (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression results in longer hypocotyls under far-red light Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) does not function in hypocotyls under red light Arabidopsis thaliana
suppressed (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression (A- ) is insensitive to fluence rates of far-red light Arabidopsis thaliana
(HY5, TED 5, AT5G11260) expression is concentrated in joint sections between cotyledons and hypocotyls Arabidopsis thaliana
CONSTITUTIVELY PHOTOMORPHOGENIC 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) mediates degradation of LONG AFTER FAR-RED LIGHT 1 (AtMYB18, LAF1, MYB18, AT4G25560)
phytochrome A (FHY2, FRE1, HY8, PHYA, AT1G09570) is primary photoreceptor responsible for mediating photomorphogenic responses in far-red light Arabidopsis thaliana
(BBX11, AT2G47890) mediates seedling development
(VQ29, AT4G37710) overexpression line shows hyposensitive hypocotyl growth to hypocotyl elongation inhibition Arabidopsis thaliana
vq29-1 mutant is indistinguishable from wild type in hypocotyl length in red or blue light conditions Arabidopsis thaliana
light-grown deetiolated seedlings display inhibited hypocotyl elongation
MORE AXILLARY GROWTH2 (AtMAX2, MAX2, ORE9, PPS, AT2G42620) positively regulates photomorphogenesis under far-red light Arabidopsis thaliana
phytochrome-mediated signals concerning the ratio of red to far red light adjust hypocotyl elongation
distinct morphology of dark-grown YHB etioplasts suggests cop phenotype of YHB is distinct from those of (ATDET1, DET1, FUS2, AT4G10180) and (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) mutants Arabidopsis thaliana
deetiolation causes cotyledon expansion
(VQ29, AT4G37710) overexpression results in hyposensitivity of hypocotyl growth to low-light conditions Arabidopsis thaliana
(ABI4, ATABI4, GIN6, ISI3, SAN5, SIS5, SUN6, AT2G40220) /ZFP3ox seedlings had significantly shorter hypocotyls than abi4-101 but longer ones when compared with ZFP3ox seedlings Arabidopsis thaliana
(AtUVR8, UVR8, AT5G63860) mutant was impaired in sunfleck-induced reduction of hypocotyl growth Arabidopsis thaliana
vq29-1 mutant has slightly but significantly shorter hypocotyl length than wild type under low-intensity white light or low-intensity far-red light Arabidopsis thaliana
(HLH1, PAR1, AT2G42870) and (ADH2, ATGSNOR1, GSNOR, HOT5, PAR2, AT5G43940) overexpression promote cotyledon unfolding Arabidopsis thaliana
gain-of-function phytochrome alleles elucidate interplay between phytochrome-dependent and phytochrome-independent photomorphogenetic pathways Arabidopsis thaliana
atTIC55-II expression is strongly induced by light Arabidopsis thaliana
(ZFP3, AT5G25160) acts additively with function of red light receptor Arabidopsis thaliana
(ZFP3, AT5G25160) does not function in PhyA- or cryptochrome-dependent signal transduction Arabidopsis thaliana
overexpression of Arabidopsis (HY3, OOP1, PHYB, AT2G18790) sequence (AtPHYB) results in stereotypical (HY3, OOP1, PHYB, AT2G18790) overexpression phenotype with short hypocotyls in white light Brassica rapa
silique length and seed weight phenotypes may be regulated by other phytochromes encoded in B. rapa genome Brassica rapa
light- and dark-grown Arabidopsis seedlings have distinct changes in gene expression in root, hypocotyl, and cotyledon Arabidopsis thaliana
seed germination and seedling growth are highly influenced by light intensity Arabidopsis thaliana
(GUN4, AT3G59400) function is obligatorily required for light/dark growth conditions
seedlings were illuminated with blue or red light for 3 h
mutation of (ATHD1, ATHDA19, HD1, HDA1, HDA19, HDAC19, RPD3A, AT4G38130) produces shorter hypocotyl phenotype Arabidopsis thaliana
light inhibits hypocotyl extension
htl-2 mutant displays long hypocotyl phenotype under blue light Arabidopsis thaliana
SPINDLY (SPY) and SECRET AGENT (SEC) regulate light signaling
DE-ETIOLATED 1 (ATDET1, DET1, FUS2, AT4G10180) is part of CDD complex (COP10–DET1–CCB1)
plants optimize photomorphogenic development
increased (APRR1, AtTOC1, PRR1, TOC1, AT5G61380) and (APRR5, PRR5, AT5G24470) expression possibly leading to suppression of hypocotyl growth
YFP-BBX29 #2 transgenic seedlings showed similar etiolated phenotypes with Col in the dark Arabidopsis thaliana
hy5-215 bbx30-2 bbx31-2 triple mutant displayed hypocotyls shorter than hy5-215 Arabidopsis thaliana
CONSTITUTIVELY PHOTOMORPHOGENIC1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) directly interact with HECATE 2 (HEC2, AT3G50330) Arabidopsis thaliana
NF-YC regulates photomorphogenesis by HDA15-mediated histone acetylation
brassinolide (BL) treatment suppresses photomorphogenesis
light-activated photoreceptors transduce light signals Arabidopsis thaliana
strigolactone analog (GR24) possibly promotes by inducing nuclear exclusion of Constitutive Photomorphogenic1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) Arabidopsis thaliana
ein194 mutant plants express truncated form of (HY3, OOP1, PHYB, AT2G18790) protein Brassica rapa
ir-ztl plants have increased hypocotyl length Nicotiana attenuata
67% overlap of early red light-responsive genes with YHB–D SSTF-regulated genes represents high level of overlap Arabidopsis thaliana
chy1-10 plants are not chilling sensitive in the light light
(ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) is involved in negative regulation of photomorphogenesis Arabidopsis thaliana
phyB-GFP fusion protein shows dynamics of cellular localization during de-etiolation Arabidopsis thaliana
light-grown deetiolated seedlings display expanded cotyledons
seedling deetiolation is one of the best-studied photomorphogenesis events
CONSTITUTIVE PHOTOMORPHOGENIC 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) is key suppressor of photomorphogenesis Arabidopsis thaliana
light participates in complicated network with hormone signaling
vq29-1 mutant exhibited reduced hypocotyl elongation under low white light and different intensities of far-red light without Suc supplement Arabidopsis thaliana
(HY3, OOP1, PHYB, AT2G18790) has unique as well as partially redundant or antagonistic roles in different photomorphogenic responses Arabidopsis thaliana
effect of red light on relative hypocotyl lengths was comparable in abi2-1 and Col-0 seedlings Arabidopsis thaliana
Woodson et al. (2015) reported molecular mechanism of deetiolation defect of Arabidopsis fc mutants Arabidopsis thaliana
complex regulatory network interconnects tetrapyrrole metabolism, photoreceptor, and G-protein signaling pathways Arabidopsis thaliana
sunflecks reduced hypocotyl growth Arabidopsis thaliana
phototropins regulate rapid inhibition of the growth of etiolated hypocotyls
(ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) targets for ubiquitination and degradation (FBI1, HFR1, REP1, RSF1, AT1G02340) Arabidopsis thaliana
ZFP3ox plants produced shorter hypocotyls than wild-type plants, both in dark and in white light Arabidopsis thaliana
(HY3, OOP1, PHYB, AT2G18790) protein was expressed in all three organs of white light-grown B. rapa seedlings Brassica rapa
light directs seedling deetiolation
(FHY2, FRE1, HY8, PHYA, AT1G09570) has unique as well as partially redundant or antagonistic roles in different photomorphogenic responses Arabidopsis thaliana
COP1-mediated degradation promotes skotomorphogenesis Arabidopsis thaliana
barley plants greenhouse-grown under artificial illumination supplemented with daily sunlight with day/night cycle of 16/8 h Hordeum vulgare
the dominant (ATPEX2, PEX2, TED3, AT1G79810) mutation in a peroxisomal protein suppresses the pleiotropic de-etiolated mutant phenotypes of (ATDET1, DET1, FUS2, AT4G10180) and (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950)
(AtSOD2, CSD2, CZSOD2, SOD2, AT2G28190) knockdown line has severe and light-dependent phenotype Arabidopsis thaliana
(ZFP3, AT5G25160) is implicated in red light signaling independent of (HY3, OOP1, PHYB, AT2G18790) Arabidopsis thaliana
inhibition of hypocotyl elongation in abi4-101 was less sensitive to red light, especially at lower fluence rates Arabidopsis thaliana
light-grown deetiolated seedlings display unfolding of apical hooks
ein194 mutants in white light conditions displayed dramatically elongated stature Brassica rapa
digestion of entire chloroplasts has been observed during greening of etiolated seedlings Arabidopsis thaliana
continuous red light (Rc) regulates approximately 80% of genes also Y276H mutant of (HY3, OOP1, PHYB, AT2G18790) (YHB)-regulated genes Arabidopsis thaliana
SNAP-LITE LED lighting system was used for red light (662 ± 10 nm) illumination Arabidopsis thaliana
(FHY2, FRE1, HY8, PHYA, AT1G09570) has dual action (positive and negative) on de-etiolation of seedlings Arabidopsis thaliana
limited overlap is consistent with light-dependent developmental differences Arabidopsis thaliana
hypocotyl elongation inhibition is dependent on fluence rate Arabidopsis thaliana
phy (phytochrome) works together with CRY to regulate photomorphogenesis
(FHY2, FRE1, HY8, PHYA, AT1G09570) (HY3, OOP1, PHYB, AT2G18790) double mutant shows reduced chlorophyll accumulation
photoactivated phytochrome interacts directly with basic helix-loop-helix (bHLH) transcription factors Arabidopsis thaliana
(PIF1, PIL5, AT2G20180) (PAP3, PIF3, POC1, AT1G09530) (AtPIF4, PIF4, SRL2, AT2G43010) and (A-PUT2, bHLHb1, PIF5, PIL6, AT3G59060) act as constitutive repressors of photomorphogenesis in the dark Arabidopsis thaliana
CRYPTOCHROME 1 (ATCRY1, BLU1, CRY1, HY4, OOP2, AT4G08920) mainly mediates de-etiolation in high light Arabidopsis thaliana
htl-1 mutant exhibits long hypocotyl phenotype under blue light Arabidopsis thaliana
genome-wide comparison of gene expression between dark-grown wild-type seedling and BR biosynthesis mutant (ATDET2, DET2, DWF6, AT2G38050) seedling treated with light or light and exogenous brassinolide (BL) confirmed negative role of BR in photomorphogenesis Arabidopsis thaliana
(HY5, TED 5, AT5G11260) protein accumulation is detected under blue light Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression suppresses hypocotyl elongation Arabidopsis thaliana
CONSTITUTIVELY PHOTOMORPHOGENIC 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) mediates degradation of LONG HYPOCOTYL IN FAR-RED (FBI1, HFR1, REP1, RSF1, AT1G02340)
MIR gene expression level determines miRNA expression levels
CONSTITUTIVELY PHOTOMORPHOGENIC 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) /SUPPRESSOR OF PHYA-105 (SPA) E3 ubiquitin ligase complex ubiquitinates ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) Arabidopsis thaliana
hec mutants partially suppress photomorphogenic phenotypes of pifq mutants Arabidopsis thaliana
cop1-6pif1hec1hec2 higher-order mutant exhibits hypocotyl length phenotype Arabidopsis thaliana
VQ29-OE PIF1-OE double transgenic plants display much longer hypocotyls than parent single overexpression lines and wild type under low light conditions Arabidopsis thaliana
CONSTITUTIVE PHOTOMORPHOGENIC 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) targets for degradation ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) Arabidopsis thaliana
Arabidopsis fc mutants show deetiolation defect when exposed to light Arabidopsis thaliana
Y276H mutant of (HY3, OOP1, PHYB, AT2G18790) (YHB) induces constitutive photomorphogenesis in light-independent fashion Arabidopsis thaliana
YHB seedlings are significantly shorter than wild type Arabidopsis thaliana
haf2-1 mutants do not display long hypocotyl phenotype Arabidopsis thaliana
pCOR28:YFP-COR28 complements cor27-2 cor28-2 mutant phenotype Arabidopsis thaliana
hy5-215 bbx28-4 bbx29-2 triple mutant seedlings displayed hypocotyl length shorter than hy5-215 Arabidopsis thaliana
deetiolation causes chlorophyll development
B. rapa FPsc (HY3, OOP1, PHYB, AT2G18790) protein (Bra022192) is more than 90% identical to Arabidopsis (HY3, OOP1, PHYB, AT2G18790) protein Brassica rapa; Arabidopsis thaliana
PHYTOCHROME E (PHYE, AT4G18130) previously linked to shade avoidance, germination, seedling de-etiolation, and flowering time Arabidopsis thaliana
YHB-regulated gene expression pattern accurately reflects process of photomorphogenesis in wild-type Arabidopsis Arabidopsis thaliana
BR deficiency stimulates photomorphogenesis
phytochrome-interacting factors (PIFs) function as negative factors in darkness or under FR, R, and B light Arabidopsis thaliana
deetiolated (HY5, TED 5, AT5G11260) null mutant seedlings exhibit reduced anthocyanin accumulation Arabidopsis thaliana
abi5-1 prevents ZFP3-promoted hypocotyl shortening Arabidopsis thaliana
complex regulatory network reacts to change in light intensity Arabidopsis thaliana
dark-grown YHB seedlings exhibit cop mutant phenotype Arabidopsis thaliana
brassinosteroids (BRs) regulates plant growth and development
genes involved in BR and light signaling pathway will help elucidate molecular mechanism of plant photomorphogenesis
light regulates chloroplast movement
COP1-mediated ubiquitination and degradation mediates the regulation of photomorphogenic development Arabidopsis thaliana
photomorphogenesis phenotype includes expanded cotyledons
hypocotyl length in darkness is slightly promoted before inhibition by blue light (BL) treatment Arabidopsis thaliana
distinct developmental programs of cotyledons and hypocotyls include promotion of cotyledon expansion
distinct developmental programs of cotyledons and hypocotyls include inhibition of hypocotyl elongation
(ATCOL3, BBX4, COL3, AT2G24790) mediates seedling development
BBX proteins control photomorphogenic development with distinct molecular mechanisms
ethylene-independent severe alterations in seedling morphology prevents apical hook formation Arabidopsis thaliana
silencing of GATA suppresses photomorphogenesis
brassinosteroid (BR) signaling represses expression of key positive regulators of light response
DELLA proteins interact with (AtPIF4, PIF4, SRL2, AT2G43010)
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) regulates cell elongation in hypocotyls Arabidopsis thaliana
microprocessor components could be differently regulated during photoperiodic changes
Cryptochromes (CRYs) mediate blue light regulation of development
red light induces stomatal opening Arabidopsis thaliana
(AtBBX32, BBX32, EIP6, AT3G21150) mediates seedling development
multiple BBX members mediate seedling development either positively or negatively seedling development
hec1hec2 double mutant partially suppressed photomorphogenic effect of cop1-6 and cop1-6pif1 double mutants Arabidopsis thaliana
The four SPA proteins form stable complex with (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) Arabidopsis thaliana
(AtbZIP, bZIP, AT1G68880) protein (HY5, TED 5, AT5G11260) (ELONGATED HYPOCOTYL5) is proposed to function as high hierarchical regulator of transcriptional cascade controlling photomorphogenesis Arabidopsis thaliana
AtOEP16 has role in de-etiolation Arabidopsis thaliana
htl-1 mutant displays long hypocotyl phenotype under blue light Arabidopsis thaliana
htl-1 and htl-2 mutants have very similar hypocotyl phenotype Arabidopsis thaliana
light regulates plant development
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression enhances blue light (BL) sensitivity Arabidopsis thaliana
(COR27, AT5G42900) VP-AAox and (COR28, HUP41, AT4G33980) VP-AAox lines show hyposensitivity to red light Arabidopsis thaliana
(AtBBX21, BBX21, LHUS, STH2, AT1G75540) (BBX22, DBB3, LZF1, STH3, AT1G78600) (bbx23, AT4G10240) (BBX24, STO, AT1G06040) (BBX25, STH, AT2G31380) and (BBX28, AT4G27310) modulate transcriptional activation activity in regulation of photomorphogenic development
cop1-6 mutant displayed opened cotyledons in the dark Arabidopsis thaliana
(BBX28, AT4G27310) /29 and (BBX30, miP1b, AT4G15248) (BBX31, miP1a, AT3G21890) may function additively in promoting hypocotyl elongation Arabidopsis thaliana
hec1hec2 double mutant significantly suppressed constitutive photomorphogenic phenotypes of pifQ Arabidopsis thaliana
hypocotyl growth inhibition depends on nuclear (HY3, OOP1, PHYB, AT2G18790)
light signal regulates plant growth and development
continuous cool-white light was provided at approximately 100 ± 10 μmol m−2 s−1 Arabidopsis thaliana
HTL overexpression causes short hypocotyl phenotype under red light Arabidopsis thaliana
htl mutants show elongated petioles Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression in hypocotyls is elevated in white light Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression in hypocotyls is significantly elevated by far-red light Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) transcript is down-regulated in hypocotyls of (HY5, TED 5, AT5G11260) mutants Arabidopsis thaliana
suppressed (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression causes hypersensitive response only under far-red, blue, and white light conditions
miP-DCL1 seedlings show delay in cotyledon opening
phytochromes are essential for plant growth and development
(AtHMAC6, AtHMP38, HMA6, PAA1, PCH1, AT4G33520) and pch1pchl seedlings failed to inhibit hypocotyl elongation in short day conditions Arabidopsis thaliana
phytochromes and cryptochromes promote photomorphogenesis
light plays important roles in control of seedling development
LBD genes function in photomorphogenesis
short day photoperiod has one point of photoinduction each day
(HY3, OOP1, PHYB, AT2G18790) works redundantly with phyA in regulating hook opening Arabidopsis thaliana
htl-2 mutant displays long hypocotyl phenotype under far-red light Arabidopsis thaliana
htl-1 mutant exhibits long hypocotyl phenotype under far-red light Arabidopsis thaliana
htl-1 young seedlings exhibits smaller cotyledon Arabidopsis thaliana
blue light (BL) inhibits hypocotyl elongation in darkness
abscisic acid (ABA) plays important roles in control of seedling development
UV RESISTANCE LOCUS 8 (AtUVR8, UVR8, AT5G63860) and CONSTITUTIVELY PHOTOMORPHOGENIC 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) interaction promotes UV-B-induced photomorphogenesis Arabidopsis thaliana
plants modulate light responses
(COR27, AT5G42900) and (COR28, HUP41, AT4G33980) act redundantly in red light-dependent hypocotyl growth inhibition Arabidopsis thaliana
(ASK1, ATSKP1, SKP1, SKP1A, UIP1, AT1G75950) seedlings grown under red and far-red light had hypocotyl length significantly shorter than WT seedlings Arabidopsis thaliana
short-day (SD) light conditions provided by white light (120 μmol m −2 s −1 ) Arabidopsis thaliana
light triggers multiple signaling pathways involving almost all plant hormones
(BBX28, AT4G27310) mediates seedling development
feedback regulatory loop of (BBX28, AT4G27310) /29, (HY5, TED 5, AT5G11260) and (BBX30, miP1b, AT4G15248) /31 fine-tunes photomorphogenic development
(FHY2, FRE1, HY8, PHYA, AT1G09570) works redundantly with phyB in regulating cotyledon unfolding Arabidopsis thaliana
light signals regulate plant growth and development
DELLA proteins interact with (PAP3, PIF3, POC1, AT1G09530)
blue light (BL) treatment triggers hypocotyl length variation
HY5-HOMOLOG (HYH, AT3G17609) directly binds to GATA-box of promoter of (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) Arabidopsis thaliana
pifq mutant shows short hypocotyls under both −UV-B and +UV-B Arabidopsis thaliana
gi mutants display elongated hypocotyls under blue light Arabidopsis thaliana
cop1-6 mutant displayed dramatically shortened hypocotyls Arabidopsis thaliana
kanamycin resistant seedlings were grown for 6 days under light light conditions
ambient light has profound effects on early seedling de-etiolation Arabidopsis thaliana
light-grown phenotype includes development of true leaves
phyB-overexpressing lines demonstrated that light sensitivity of phyB-mediated photomorphogenic responses is dose-dependent Arabidopsis thaliana
mathematical modeling confirmed good correlation between absolute Pfr levels and physiological activity Arabidopsis thaliana
phytochrome-interacting factors (PIFs) repress seedling photomorphogenesis
htl mutants show attenuated expression of chalcone synthase (ATCHS, CHS, TT4, AT5G13930) Arabidopsis thaliana
light sensing triggers adjustment of energy distribution
LONG HYPOCOTYL 5 (HY5, TED 5, AT5G11260) is required for hypocotyl growth inhibition in lighted conditions
brassinosteroids (BRs) are closely related to photomorphogenesis
(HY5, TED 5, AT5G11260) mutants showed irregular hypocotyl length promotion in response to elevated blue light (BL) treatment
BR-responsive gene expression inhibition promotes UV-B-induced photomorphogenesis
GIGANTEA (GI) physically interacts with phytochrome B (HY3, OOP1, PHYB, AT2G18790) Arabidopsis thaliana
HA-YFP-COR27 or -COR28 overexpression lines have shorter hypocotyls than wildtype when grown in R light
root hair elongation under control conditions is sensitive to light
(FHY2, FRE1, HY8, PHYA, AT1G09570) works redundantly with phyB in regulating hypocotyl growth inhibition Arabidopsis thaliana
htl mutants show retarded cotyledon expansion Arabidopsis thaliana
BR biosynthesis-defective mutants ( (ATDET2, DET2, DWF6, AT2G38050) (AtDWF4, CLM, CYP90B1, DWF4, PSC1, SAV1, SNP2, AT3G50660) (CBB3, CPD, CYP90, CYP90A, CYP90A1, DWF3, AT5G05690) (ATBRI1, BIN1, BRI1, CBB2, DWF2, AT4G39400) (ATSK21, BIN2, DWF12, SK21, UCU1, AT4G18710) ) display photomorphogenesis phenotype Arabidopsis thaliana
BR biosynthesis-defective mutants ( (ATDET2, DET2, DWF6, AT2G38050) (AtDWF4, CLM, CYP90B1, DWF4, PSC1, SAV1, SNP2, AT3G50660) (CBB3, CPD, CYP90, CYP90A, CYP90A1, DWF3, AT5G05690) (ATBRI1, BIN1, BRI1, CBB2, DWF2, AT4G39400) (ATSK21, BIN2, DWF12, SK21, UCU1, AT4G18710) ) display photomorphogenesis phenotype when grown in darkness Arabidopsis thaliana
photomorphogenesis phenotype includes short hypocotyls
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) does not function in hypocotyls under dark Arabidopsis thaliana
(HY5, TED 5, AT5G11260) protein accumulation is similar to (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression Arabidopsis thaliana
(HY5, TED 5, AT5G11260) (HYH, AT3G17609) double mutant displays strong phenotype (HY5, TED 5, AT5G11260) and (HYH, AT3G17609) function in photomorphogenesis Arabidopsis thaliana
mutations in hec genes partially suppress photomorphogenic phenotypes of cop1-6pif1 and pifQ mutant seedlings growing in the dark Arabidopsis thaliana
exposure to total darkness for 2 h results in reduction in (DDA1, AT5G41560) transcript abundance in wild-type seedlings Arabidopsis thaliana
(DDA1, AT5G41560) functions as transcriptional activator to repress hypocotyl elongation in the light Arabidopsis thaliana
phytochromes mediate light-regulated pathways
transgenic plants with suppressed (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression exhibits elongated hypocotyls under darkness
blue light (BL) induces hypocotyl elongation under light
phytochromes and cryptochromes are known to repress CONSTITUTIVE PHOTOMORPHOGENESIS 1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) activity
UV-B light antagonizes thermomorphogenesis
COLD-REGULATED GENE 28 (COR28, HUP41, AT4G33980) represses early seedling development in red light
phytochrome-interacting factors (PIFs) includes (PIF1, PIL5, AT2G20180) (PAP3, PIF3, POC1, AT1G09530) (AtPIF4, PIF4, SRL2, AT2G43010) and (A-PUT2, bHLHb1, PIF5, PIL6, AT3G59060)
(AtBBX21, BBX21, LHUS, STH2, AT1G75540) mediates seedling development
CONSTITUTIVELY PHOTOMORPHOGENIC1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) directly interact with HECATE 2 (HEC2, AT3G50330) Arabidopsis thaliana
htl-1 mutant displays long hypocotyl phenotype under red light Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) transcript in (HY5, TED 5, AT5G11260) (HYH, AT3G17609) mutant is down-regulated compared to wild-type plants Arabidopsis thaliana
miRNA-biogenetic inconsistency could be essential for seedlings buried deep in soil
increase in ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) abundance triggers photomorphogenesis
light regulates seedling de-etiolation
(APRR1, AtTOC1, PRR1, TOC1, AT5G61380) mutant is hyposensitive to R light with regard to inhibition of hypocotyl growth
SUPPRESSOR OF (FHY2, FRE1, HY8, PHYA, AT1G09570) (SPA) proteins and CONSTITUTIVELY PHOTOMORPHOGENIC1 (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) complex suppress plant photomorphogenesis Arabidopsis thaliana
plates kept under corresponding light conditions for 1 week for hypocotyl measurement Arabidopsis thaliana
htl-2 mutant shows phenotypic spectrum similar to htl-1 Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression in hypocotyls is elevated in blue light Arabidopsis thaliana
(HY5, TED 5, AT5G11260) (HYH, AT3G17609) mutants curve peak shifts left to 10 or 100 μM blue light (BL) concentration
(AtHMAC6, AtHMP38, HMA6, PAA1, PCH1, AT4G33520) and PCHL result in enhanced light sensitivity
PIF transcription factors are central regulators of seedling de-etiolation
cor27-2 cor28-2 phyB-9 triple mutant is almost completely insensitive to red light, similar to phyB-9 single mutant Arabidopsis thaliana
CaM7-light-induced photomorphogenesis requires an additional factor or modification Arabidopsis thaliana
double mutations of haf2-1 and hy5-1 have synergistic effect on photomorphogenic traits Arabidopsis thaliana
htl-1 young seedlings exhibits longer petioles Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression in hypocotyls is elevated in far-red light Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) suppression of brassinosteroid signaling and ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) and -HOMOLOG (HYH, AT3G17609) activation of synergistically regulate cell elongation of hypocotyls Arabidopsis thaliana
bbx28-4 bbx29-2 mutant showed similar hypocotyl phenotypes to Col when grown in the dark Arabidopsis thaliana
(HY5, TED 5, AT5G11260) protein accumulation suggests a possible link between (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) and (HY5, TED 5, AT5G11260) Arabidopsis thaliana
(HY5, TED 5, AT5G11260) mutant exhibits elongated hypocotyls under darkness
UV-B light antagonizes shade avoidance
elongated hypocotyl of gi mutants suggests repressive role in photoreceptor mediated growth inhibition Arabidopsis thaliana
COLD-REGULATED GENE 27 (COR27, AT5G42900) represses early seedling development in far-red light
COLD-REGULATED GENE 28 (COR28, HUP41, AT4G33980) represses early seedling development in blue light
bbx30-2 bbx31-2 double mutant seedlings displayed shortened hypocotyls compared with Col light conditions Arabidopsis thaliana
PHYTOCHROME-INTERACTING FACTOR 1 (PIF1, PIL5, AT2G20180) directly interact with HECATE 2 (HEC2, AT3G50330) Arabidopsis thaliana
haf2-1 mutants can enhance long hypocotyl phenotype of blue light receptor mutants (hy4-1) Arabidopsis thaliana
CRYPTOCHROME 1 (ATCRY1, BLU1, CRY1, HY4, OOP2, AT4G08920) regulates photomorphogenesis under continuous light (CL) or short-day (SD) illuminated by white light (WL-CL or WL-SD) or blue light (BL-CL or BL-SD) Arabidopsis thaliana
light is one of the most informative environmental signals for plant growth, development, and survival
mature chloroplasts are required for photosynthesis
tissue-specific expression pattern of (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) is similar to tissue-specific expression pattern of (HY5, TED 5, AT5G11260) Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) transcript is elevated in (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) mutant Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) overexpression causes hyposensitive response to exogenous blue light (BL) in light types
ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) is extensively studied for importance in photomorphogenesis Arabidopsis thaliana
strong overexpression of HA-YFP-COR27 and -COR28 in COR27ox-1 and COR28ox-1 leads to hypersensitive response to red light Arabidopsis thaliana
bbx28-4 bbx29-2 double mutant seedlings displayed shortened hypocotyls compared with Col light conditions Arabidopsis thaliana
phytochrome-interacting factors (PIFs) are group of repressors
htl seedling photomorphogenesis phenotype points to existence of endogenous ligand Arabidopsis thaliana
(ATPHO1, PHO1, AT3G23430) ;H4 (SHORT HYPOCOTYL UNDER BLUE1 (SHB1, AT4G25350) ) has regulatory role in hypocotyl elongation under blue light Arabidopsis thaliana
24-epibrassinolide (EBL) treatment promotes apical hook formation Arabidopsis thaliana
photomorphogenesis occurs during dark-light transition Arabidopsis thaliana
strong overexpression of wildtype (COR27, AT5G42900) and (COR28, HUP41, AT4G33980) in COR27ox-1 and COR28ox-1 might lead to antagonistic effects on (COR27, AT5G42900) and (COR28, HUP41, AT4G33980) function Arabidopsis thaliana
pifq mutant hypocotyl elongation arrest is similar to PhyB-overexpressing transgenic seedlings Arabidopsis thaliana
HECATE proteins ( (HEC1, AT5G67060) 2 and 3) act as positive regulators of photomorphogenesis
HISTONE DEACETYLASE 15 (ATHDA15, HDA15, AT3G18520) positively regulates photomorphogenesis
PAR-RNAi seedlings exhibit hyperetiolation phenotypes Arabidopsis thaliana
(ZFP3, AT5G25160) suggests role for ZFP3 in amplification of red light signals Arabidopsis thaliana
redundant role between the many PIFs may explain absence of (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) mutant-like phenotype in (PAP3, PIF3, POC1, AT1G09530) (AtPIF4, PIF4, SRL2, AT2G43010) double mutant Arabidopsis thaliana
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression in hypocotyls is up-regulated by light Arabidopsis thaliana
peak shifts were not observed in darkness
red light (λ max 680 nm) supplied by LED light sources (Qiding Photo Electric Shanghai Co., (GDC1, LTD, AT1G50900) Shanghai, China) Arabidopsis thaliana
GATA protein is stabilized in light
phosphorylation state of the (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) interaction site is mediated by casein kinase II (CKII)
(HY5, TED 5, AT5G11260) and HYH-mediated (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) regulation may serve as bridge linking brassinosteroid signaling and photomorphogenesis Arabidopsis thaliana
4-day etiolated PCH1OE and PCHLOE seedlings showed delayed cotyledon greening Arabidopsis thaliana
UV-B light perception and signal transduction benefits plants by inducing photomorphogenic development
weak (COR27, AT5G42900) overexpression line has longer hypocotyls than wildtype when grown in R light
photomorphogenesis (de-etiolation) is critical for enabling germinated seed to become healthy seedling
feedback loop consisting of (BBX28, AT4G27310) (BBX29, AT5G54470) (BBX30, miP1b, AT4G15248) (BBX31, miP1a, AT3G21890) and (HY5, TED 5, AT5G11260) regulates photomorphogenesis
bbx29-1 and bbx29-2 mutants displayed significantly shortened hypocotyls compared with Col when grown in white (W), blue (B), red (R) and far-red (FR) light conditions Arabidopsis thaliana
(BBX29, AT5G54470) promotes hypocotyl elongation Arabidopsis thaliana
four of the up-regulated chloroplast proteins have also been shown to be up-regulated during light-induced photomorphogenesis Arabidopsis thaliana
HTL overexpression causes short hypocotyl phenotype under far-red light Arabidopsis thaliana
(HY5, TED 5, AT5G11260) expression is concentrated in cotyledons Arabidopsis thaliana
(HY5, TED 5, AT5G11260) protein accumulation is detected under white light Arabidopsis thaliana
low expression of (AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) results in stimulation of cell elongation Arabidopsis thaliana
Ultraviolet-B (UV-B) light at low intensities can promote photomorphogenesis Arabidopsis thaliana
(HY3, OOP1, PHYB, AT2G18790) is key factor for seedling establishment
HECATE 2 (HEC2, AT3G50330) is degraded in the dark and is stabilized by light at seedling stage Arabidopsis thaliana
(GUN1, AT2G31400) mutant is defective in greening after transfer from dark to light Arabidopsis thaliana
internode elongation is regulated by phytochromes Arabidopsis thaliana
deetiolation occurs during underground seedlings emergence to light Arabidopsis thaliana
complex molecular cascades reprogram seedlings for photomorphogenesis Arabidopsis thaliana
(ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) and the four partially redundant SPA proteins work together to repress photomorphogenesis Arabidopsis thaliana
(HY5, TED 5, AT5G11260) HOMOLOG (HYH, AT3G17609) is predominantly involved in blue light-mediated development
light-grown seedlings of miP-DCL1 have defects in flowering time
phytochromes are red/far-red reversible photoreceptors
(SAUR27, AT3G03840) (SAUR28, AT3G03830) and (SAUR66, AT1G29500) expression is required for cotyledon expansion Arabidopsis thaliana
cor27-2 cor28-2 double mutant shows strongly reduced hypocotyl growth compared with wildtype in red light Arabidopsis thaliana
(BBX31, miP1a, AT3G21890) mediates seedling development
YFP-BBX29 cop1-6 #2 transgenic line was indistinguishable from Col and YFP-BBX29 #2 grown in the dark Arabidopsis thaliana
HECATEs (HECs) directly interact with and antagonize phytochrome-interacting factors (PIFs)
tobacco cell lines VBI-0 and BY-2 lack light response Nicotiana tabacum
NPA inhibition of hypocotyl elongation has wavelength dependency the same as found for division synchrony in VBI-3 Arabidopsis thaliana
blue light triggers responses through range of mechanisms at molecular, cellular, and organ levels
darkness promotes activity of E3 ubiquitin ligase (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) /SPA
liquid-liquid phase separation (LLPS) influences photomorphogenesis
pentuple DELLA knockout mutants show only slightly altered elongation in red light
blue light decreases yielding properties of cell walls
efo mutant does not exhibit constitutive photomorphogenesis Arabidopsis thaliana
two major classes of photoreceptors mediate seedling de-etiolation Arabidopsis thaliana
continuous red light had little impact on NPA inhibition of hypocotyl elongation Arabidopsis thaliana
blue light is known to trigger large variety of photomorphogenic responses
ted5-1 mutant hypocotyls are longer than dda1-1 hypocotyls Arabidopsis thaliana
phytochrome mediates developmental responses to light stimuli
E3 ubiquitin ligase (ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) /SPA is key repressor of photomorphogenesis
(JK224, NPH1, PHOT1, RPT1, AT3G45780) LOV2-kinase expression in -5phot2-1 mutant is fully functional in restoring leaf expansion Arabidopsis thaliana
continuous far-red light and blue light were most effective NPA inhibition of hypocotyl elongation Arabidopsis thaliana
(FHY2, FRE1, HY8, PHYA, AT1G09570) works redundantly with phyB in regulating chlorophyll content Arabidopsis thaliana
(ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) shows correlation between expression and light sensitivity Arabidopsis thaliana
cryptochromes mediate light-regulated pathways
light-related transcription factors stimulate photomorphogenesis
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) expression in hypocotyls is significantly elevated by blue light Arabidopsis thaliana
(HY5, TED 5, AT5G11260) and (HYH, AT3G17609) mutants exhibit dark-like hypocotyls in light dark-like hypocotyl phenotype Arabidopsis thaliana
homeostasis of (FHY1, FRY1, PAT3, AT2G37678) ensures proper photomorphogenic development under changing light conditions
absence of miRNA-biogenetic inconsistency mechanism could result in internal conflicts between miRNAs and light-responsive transcripts
(HY3, OOP1, PHYB, AT2G18790) is most important in mediating physiological responses Arabidopsis thaliana
cor27-2 cor28-2 hypocotyl growth is reduced compared with wildtype
(APRR5, PRR5, AT5G24470) mutant is hyposensitive to R light with regard to inhibition of hypocotyl growth
lincomycin-induced retrograde signaling occurs via GUN1-independent pathway
apocarotenoid signal (ACS) alters nuclear photomorphogenetic gene expression, including PhANGs
shading causes conversion of PfrB into inactive isoform (PrB)
photomorphogenic development is accompanied by developed chloroplasts
(AtbZIP, bZIP, AT1G68880) gene (HY5, TED 5, AT5G11260) is a positive regulator of photomorphogenic responses Arabidopsis thaliana
pifQhec1hec2 sextuple mutant exhibits hypocotyl length phenotype Arabidopsis thaliana
hypocotyl growth-inhibition response requires continuous irradiation over 3 d Arabidopsis thaliana
hy5-1 seedlings show significantly reduced (DDA1, AT5G41560) transcript levels Arabidopsis thaliana
(JK224, NPH1, PHOT1, RPT1, AT3G45780) acts as blue light receptor in rapid inhibition of hypocotyl elongation Arabidopsis thaliana
plant development responds to environmental cues
light induction of chloroplastic GS is mediated by phytochrome Arabidopsis thaliana
DOWN IN DARK AND AUXIN1 (DDA1, AT5G41560) functions in aspects of photomorphogenesis Arabidopsis thaliana
transcriptional cascades lead to subsequent photomorphogenic development Arabidopsis thaliana
GUN1-dependent plastid signals repressed cotyledon expansion in low fluence blue light Arabidopsis thaliana
photoreactivation experiment provides evidence that inhibition of hypocotyl growth in etiolated seedlings is a consequence of photodimer formation Arabidopsis thaliana
ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) is involved in photomorphogenesis Arabidopsis thaliana
cryptochrome acts in much slower response to hypocotyl elongation inhibition Arabidopsis thaliana
light is a major environmental determinant of plant morphology
dda1-1 ted5-1 double-mutant hypocotyls are similar to ted5-1 single mutant hypocotyls Arabidopsis thaliana
Arabidopsis cryptochromes regulate gene expression to affect developmental responses Arabidopsis thaliana
(AtMAX2, MAX2, ORE9, PPS, AT2G42620) mutant have longer hypocotyls and slightly smaller cotyledons under continuous red, far-red, and blue light compared with wild-type (WT) seedlings Arabidopsis thaliana
dark-grown dda1-1/+ seedlings produced hypocotyls intermediate in length between Col wild type and dda1-1 homozygotes Arabidopsis thaliana
bkk1-1 mutant did not show de-etiolated phenotypes Arabidopsis thaliana
differences in hypocotyl length are light dependent light
synergism between phytochrome B (HY3, OOP1, PHYB, AT2G18790) and cryptochrome 1 (ATCRY1, BLU1, CRY1, HY4, OOP2, AT4G08920) generates hysteresis in gene expression Arabidopsis thaliana
induction of (SPA1, AT2G46340) (SPA4, AT1G53090) (HY5, TED 5, AT5G11260) and (HYH, AT3G17609) genes showed no synergism between phytochrome B (HY3, OOP1, PHYB, AT2G18790) and cryptochrome 1 (ATCRY1, BLU1, CRY1, HY4, OOP2, AT4G08920) Arabidopsis thaliana
(ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) /SPA complexes may modulate (AtERF#092, ERF1, ERF1B, AT3G23240) protein stability
blue light induces inhibition of hypocotyl elongation
(FHY2, FRE1, HY8, PHYA, AT1G09570) as light antenna enables rapid promotion of de-etiolation upon soil emergence
responses of leaves to unnatural environments provides the possibility to unravel complex developmental and functional interactions that normally occur in the natural light environment
stomatal responses to blue light could play a key role in photomorphogenetic mechanisms Festuca arundinacea
gain-of-function Cape Verde Islands QTL allele of the (AT-PHH1, ATCRY2, CRY2, FHA, PHH1, AT1G04400) gene ( -Cvi) was found to enhance cotyledon unfolding in the absence of blue light Arabidopsis thaliana
cry1cry2 mutant shows hypocotyl elongation indistinguishable from wild-type seedlings Arabidopsis thaliana
col-4 and cry1cry2 seedlings grown under continuous red light Arabidopsis thaliana
(ATPIN1, PIN1, AT1G73590) is crucial for photomorphogenesis Arabidopsis thaliana
hypocotyl elongation is under control of gibberellins Arabidopsis thaliana
phyE-1 mutant plants display internode growth between rosette leaves and early flowering Arabidopsis thaliana
HR and resistance to TCV conditioned by the R gene (HRT, RCY1, RPP8, AT5G43470) is independent of phytochromes A and B
(AtMAPR5, ATMP1, MAPR5, MSBP1, AT5G52240) may play a role in plant photomorphogenesis Arabidopsis thaliana
photomorphogenic signals are sensed by photoreceptors
high irradiance results in short hypocotyls with expanded leaves in dicotyledonous seedlings
(HY5, TED 5, AT5G11260) is targeted for degradation in the dark Arabidopsis thaliana
photomorphogenic development is accompanied by photosynthetic gene expression
(ELF3, PYK20, AT2G25930) has phyB-dependent and -independent effects on hypocotyl growth Arabidopsis thaliana
CK and light signalling pathways operate independently and converge at regulation of stability of ELONGATED HYPOCOTYL 5 (HY5, TED 5, AT5G11260) Arabidopsis thaliana
brassinosteroids show opposite action to photomorphogenesis
plant development and physiology are strongly influenced by light spectrum of the growth environment
dark-induced transcript regulation is not apparent in dda1-1 ted5-1 double mutants Arabidopsis thaliana
(HY5, TED 5, AT5G11260) is absent in dark conditions Arabidopsis thaliana
novel cytokinin (CK)-regulated proteins role in initiation and/or execution of photomorphogenetic programme Arabidopsis thaliana
seedlings crossing litter layer of forest after which photomorphogenesis rules prevail Hymenaea courbaril
light-grown Arabidopsis seedlings exhibit open and expanded cotyledons Arabidopsis thaliana
light induces chloroplast differentiation
adventitious root formation requires light Arabidopsis thaliana
addition of blue light strongly inhibits hypocotyl growth
dda1-1 plants displayed aberrant hypocotyl elongation in dark
altered definitions of short days associated with different photomorphogenetic and circadian phenotypes Arabidopsis thaliana
(AGY1, AtcpSecA, SECA1, AT4G01800) transcript steadily accumulated, accompanying greening process of 4-d-old etiolated wild-type seedlings Arabidopsis thaliana
cryptochromes regulate development in plants
phytochrome B is most abundant in light-grown plants
(COI1, AT2G39940) is possible to be regulated directly or indirectly by light Arabidopsis thaliana
(DDA1, AT5G41560) negatively regulates hypocotyl elongation during photomorphogenesis Arabidopsis thaliana
Arabidopsis seeds were grown under white light at 50 μmol m−2 s−1 Arabidopsis thaliana
(HY5, TED 5, AT5G11260) activity contributes to (DDA1, AT5G41560) regulation Arabidopsis thaliana
irradiance can significantly modify mesophyll structure
light source (neon tubes) with prevailing far-red-to-orange light spectrum could be the cause of differing behaviour of stomata and mesophyll
guard cells could be more sensitive to far-red light than mesophyll receptors
increased endogenous cytokinin (CK) levels induces partial cotyledon opening Arabidopsis thaliana
conversion of etioplasts to chloroplasts occurs during de-etiolation
cryptochromes ( (ATCRY1, BLU1, CRY1, HY4, OOP2, AT4G08920) and (AT-PHH1, ATCRY2, CRY2, FHA, PHH1, AT1G04400) ) and red/far-red light receptor phytochromes regulate photomorphogenic responses Arabidopsis thaliana
variations in light quality act as photomorphogenic signals
dark-grown seedlings show nearly abolished GUS activity Arabidopsis thaliana
(ATDET1, DET1, FUS2, AT4G10180) (C22) controls the transcription of multiple genes involved in photomorphogenesis
spt-10 mutant displays large cotyledon phenotype Arabidopsis thaliana
CRYPTOCHROME (CRY) could enhance expression of (HY5, TED 5, AT5G11260) (HYH, AT3G17609) (SPA1, AT2G46340) and (SPA4, AT1G53090) Arabidopsis thaliana
lux-4 LUX-CRES lines complemented hypocotyl growth defect of lux-4 Arabidopsis thaliana
PHYTOCHROME RAPIDLY REGULATED1 (HLH1, PAR1, AT2G42870) is light-regulated transcript de-regulated in only one of (ATDET1, DET1, FUS2, AT4G10180) and pifq mutants Arabidopsis thaliana
(ATHY2, GUN3, HY2, AT3G09150) mutant is NASC resource Arabidopsis thaliana
(HY5, TED 5, AT5G11260) mutants exhibit long hypocotyl in light Arabidopsis thaliana
changes in Pc correlated with altered hypocotyl elongation phenotypes in the light
retrograde signal acts in signal-responsive cells Arabidopsis thaliana
COP1oe overexpression line is similar to (AT-PHH1, ATCRY2, CRY2, FHA, PHH1, AT1G04400) and UBP13oe seedlings Arabidopsis thaliana
(ATCOP1, COP1, DET340, EMB168, FUS1, AT2G32950) mutant has shorter hypocotyl Arabidopsis thaliana
photomorphogenesis is controlled by CRYPTOCHROME 2 (AT-PHH1, ATCRY2, CRY2, FHA, PHH1, AT1G04400) Arabidopsis thaliana
cotyledonary node is anatomically correct terminus Arabidopsis thaliana
CRLs regulate photomorphogenesis Arabidopsis thaliana
partial loss-of-function (ATRBX1, HRT1, RBX1, ROC1, AT5G20570) alleles showed long hypocotyls under blue, far-red and red light Arabidopsis thaliana
exogenously applied cytokinin (CK) causes reductions in hypocotyl elongation and leaf primordia initiation Arabidopsis thaliana
(GUN1, AT2G31400) seedlings show differences in hypocotyl elongation compared to wild-type seedlings Arabidopsis thaliana
DDB1 is directly linked to seedling photomorphogenesis Solanum lycopersicum
light signaling pathway converges with auxin signaling pathway Arabidopsis thaliana
Hymenaea courbaril exhibits shade tolerance Hymenaea courbaril
light induces photomorphogenesis
clonal descendants of the VBI-0 line were screened for auxin-autonomous growth and responsiveness to light manifested by chlorophyll synthesis Nicotiana tabacum
(HY5, TED 5, AT5G11260) is a key player in promotion of photomorphogenesis Arabidopsis thaliana
more than half of identified chloroplast proteins are up-regulated at the transcript level during light-induced photomorphogenesis Arabidopsis thaliana
developmental changes in photomorphogenesis depend on colour, intensity, direction, or photoperiod of light source
phyABDE quadruple mutant exhibited reduced cotyledon-expansion phenotype compared to wild-type Arabidopsis thaliana