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ja signaling

13519 relationships annotated with this phrase. Showing first 500 of 13519.
Source entity Relationship Target entity Species
ABA receptors have been implicated in metabolic reprogramming induced by methyl jasmonate (MeJA)
JAZ proteins with variable stability owing to modification of Jas degron or alternative splicing Arabidopsis thaliana
cryptic-MYC interaction domain (CMID) increases strength of repression on MYC TFs Arabidopsis thaliana
12-hydroxyjasmonic acid glucoside-induced leaf closure is independent from COI1-JAZ module
Suc effects mask JAM-MYC2 antagonism on (ATVSP2, VSP2, AT5G24770) expression
jasmonic acids (JAs) regulate growth, development and stress responses Oryza sativa; Arabidopsis thaliana
RNA interference line targeting all three OsCOIs will be required to test hypothesis of overlapping OsCOI functions Oryza sativa
specialized functions of OsCOI2 in plant developmental processes include fertility Oryza sativa
protein stability may differentially control JA responses Arabidopsis thaliana
COI-JAZ interaction combinations could explain specificity of OsCOIs Oryza sativa
OsCOI2 exhibits greater partner selectivity than OsCOI1a and OsCOI1b Oryza sativa
oscoi2 mutants regulate seed size Oryza sativa
COI gene is duplicated in monocots
COI gene duplication in monocots could contribute to diversity of JA signaling
MdPYL4 promotes JA synthesis and signaling in an ABA-dependent manner Malus domestica
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) expression is induced by pathogen infection
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) negatively regulates (AtERF#092, ERF1, ERF1B, AT3G23240) expression
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) has negative effect on (LCR77, PDF1.2, PDF1.2A, AT5G44420) expression
OsCOI1b is functional JA receptor Oryza sativa
two-time treatment with NlVgN in JA pathway-impaired rice has no effect on number of eggs laid by gravid BPH females Oryza sativa; Nilaparvata lugens
induced resistance to chewing insects is largely dependent on JA signaling pathway Arabidopsis thaliana
oscoi1b mutants controls seed size Oryza sativa
target gene selection may differentially control JA responses Arabidopsis thaliana
different JAZs interact with different JA-responsive TFs
jasmonic acid (JA) has role in regulation of mutualistic interactions
circadian clock component directly controls JA signaling
OsCOI1a and OsCOI1b bind to OsJAZs Oryza sativa
OsCOI2 can bind to coronatine Oryza sativa
Inagaki et al., 2022 suggested that OsCOI2 is the central regulator of JA responses in leaves Oryza sativa
JAM genes have little effect on (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) expression
bioactive JAs are perceived by JAZ proteins
OsCOI1a is JA receptor Oryza sativa
some JAZs have tissue-specific patterns of expression
OsCOI1s play redundant role with OsCOI2 in shoot growth Oryza sativa
Arabidopsis ABA receptor (PYL6, RCAR9, AT2G40330) has been shown to interact directly with (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
N of the imidazole ring of H386 could also form hydrogen bond Oryza sativa
two-time treatment with NlVgN in JA pathway-impaired rice has no effect on hatching rate of BPH eggs Oryza sativa; Nilaparvata lugens
genetic removal of 10 JAZs in jazD is sufficient to de-repress both JA and JA-ET pathways Arabidopsis thaliana
JASMONATE ASSOCIATED MYC2-LIKE (JAM) proteins negatively regulate JA responses Arabidopsis thaliana
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) expression is induced by wounding stress
MYC and JAZ paralogs control production of defense compounds derived from aromatic amino acids (AAAs) Arabidopsis thaliana
constitutive activation of (MYC3, AT5G46760) D94N and (MYC4, AT4G17880) D102N phenocopies JAZ-depleted state of jazD Arabidopsis thaliana
JASMONATE ASSOCIATED MYC2-LIKE (JAM) proteins act as antagonists of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
JA-Val and JA-Leu promoted less OsCOI2-OsJAZs interactions Oryza sativa
de-repression of both JA and JA-ET pathways confers resistance to both folivores and necrotrophic pathogens Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) destabilization suppresses JA signaling Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is a regulator of JAM genes
(COI1, AT2G39940) interacts with JAZ proteins
OsJAZ8 and 11 are partners for OsCOI1a Oryza sativa
jasmonic acid (JA) has role in defence against necrotrophic microorganisms and herbivores
(LCR77, PDF1.2, PDF1.2A, AT5G44420) expression in jam x3 is comparable to wild type
(MED25, PFT1, AT1G25540) is an important component to regulate expression of JA-responsive genes Arabidopsis thaliana
classical pull-down assays were performed in the presence of authentic endogenous ligands Oryza sativa
each OsCOI1 revealed some degree of specificity Oryza sativa
Laccaria bicolor effector MiSSP7 inhibits JA-signaling pathway Laccaria bicolor
severe JAZ depletion in jazD reorganizes TF-JAZ-corepressor complexes Arabidopsis thaliana
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) expression is induced by methyl jasmonate (MJ) treatment
JAMs and (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) have negative effects on ERF1 expression with distinct timing (AtERF#092, ERF1, ERF1B, AT3G23240) expression
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is upstream of JAM genes
increased concentrations of bioactive JAs promote interaction between different OsCOI-OsJAZ combinations Oryza sativa
JA-AA mimics were synthesized using coronafacic acid moiety of COR and nonpolar (AAS, AtAAS, AT2G20340) Oryza sativa
OsCOI2's ability to accept a broader range of ligands may be explained by Y386H substitution Oryza sativa
recombinant protein NlVgN treatment up-regulates OsJAZ8 Oryza sativa
PtJAZ6 negatively regulates JA response Populus trichocarpa
Arabidopsis ABA receptor (PYL6, RCAR9, AT2G40330) interaction with (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) influences transcriptional activity of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
(bHLH013, bHLH13, JAM2, AT1G01260) transcript level is reduced in coi1-1 mutant
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) partially regulates JAM genes expression
concentrations of bioactive JAs increase in rice in response to environmental stresses Oryza sativa
ubiquitination and degradation of JASMONATE (AtTIFY1, GATA25, TIFY1, ZIM, AT4G24470) DOMAIN (JAZ) proteins releases repression of different transcription factors (TFs) interacting with JAZ proteins
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) modulates growth/defence trade-offs Arabidopsis thaliana
JA enhances plant resistance against necrotrophic pathogens
OsCOI1a is functional JA receptor Oryza sativa
OsCOI1a and OsCOI1b play overlapping roles in spikelet development Oryza sativa
Inagaki et al., 2022 revealed crucial roles of OsCOI2 in rice fertility and root growth Oryza sativa
different sectors of JA signaling produce a variety of JA outputs Oryza sativa
oscoi2 mutants regulate root growth Oryza sativa
this study includes both rice development and herbivore defense Oryza sativa
JAZ-TF interactome evolutionary expansion contributes to diversity and specificity of JA responses
basic helix-loop-helix (bHLH) transcription factors (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) (MYC3, AT5G46760) (MYC4, AT4G17880) or (ATNIG1, bhlh28, MYC5, NIG1, AT5G46830) interact with JASMONATE (AtTIFY1, GATA25, TIFY1, ZIM, AT4G24470) DOMAIN (JAZ) proteins
OsCOI2 with JA-Ile interacts with OsJAZ3, 4, 6, 7, 10, and 15 Oryza sativa
specialized functions of OsCOI2 in plant developmental processes include root growth Oryza sativa
monocot species that harbor multiple COIs are focus of this study Oryza sativa
JAM-MYC2 antagonistic relationship on (ATVSP2, VSP2, AT5G24770) expression is more evident when plants are grown on GM with lower Suc concentration 0.5% Suc medium
JAZ proteins and DELLA proteins involves direct interaction growth repression mechanism
COI1-JAZ1 interaction is followed by (AtJAZ1, JAZ1, TIFY10A, AT1G19180) protein degradation
each OsCOI's ability to bind to different ligands and JAZ proteins may be related to functional diversity Oryza sativa
ATP-induced Ca2+ may directly stimulate JA signaling
JA phytohormone signaling pathway corresponds to rhythmic production of JA-mediated defense compounds
dicots usually have a single COI and multiple JAZs
prevention of (AtJAZ1, JAZ1, TIFY10A, AT1G19180) /2 degradation by Avh94 suppresses JA signaling Phytophthora sojae
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant attenuates root phenotype of jam x3 mutant
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) plays an important role in regulating JA-responsive genes
enhanced (ATVSP2, VSP2, AT5G24770) expression phenotype in jam x3 is attenuated by (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutation
extracellular ATP-induced genes are induced through MeJA
protein degradation of JAZs was promoted by (AtRIN4, RIN4, AT3G25070) or (AHA1, HA1, OST2, PMA, AT2G18960)
JAZ protein degradation without exogenous JA addition is mediated by endogenous JA
ZEITLUPE (ADO1, FKL2, LKP1, ZTL, AT5G57360) directly interacts with JASMONATE (AtTIFY1, GATA25, TIFY1, ZIM, AT4G24470) DOMAIN (JAZ) proteins Nicotiana attenuata
(ADO1, FKL2, LKP1, ZTL, AT5G57360) functions in derepression of JAZ proteins Nicotiana attenuata
JAZ proteins in N. attenuata interact with MYC2a Nicotiana attenuata
extracellular ATP may independently enhance JA signaling
extracellular ATP may stimulate activity of (ABCG16, AtABCG16, ATJAT1, JAT1, AT3G55090)
evening complex ( (LUX, PCL1, AT3G46640) (ELF3, PYK20, AT2G25930) and (ELF4, AT2G40080) ) acts as suppressor of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
SCF (COI1, AT2G39940) is hypothesized to target for degradation repressor proteins of JA signaling Arabidopsis thaliana
AtJAT3 (AtABCG6) and AtJAT4 (AtABCG20) expression in stamens depends on endogenous JA Arabidopsis thaliana
extracellular ATP acts on JA signaling through direct enhancement of COI1-JAZ1 interaction
ATP induces JA-inducible genes
ZEITLUPE (ADO1, FKL2, LKP1, ZTL, AT5G57360) interaction with JASMONATE (AtTIFY1, GATA25, TIFY1, ZIM, AT4G24470) domain (JAZ) proteins is CORONATINE-INSENSITIVE1- and jasmonoyl-isoleucine conjugate-independent Nicotiana attenuata
downstream signaling activates JA signaling
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) has been shown to regulate synthesis of nicotine
basal fluctuations in JA signaling contribute to greater susceptibility of Arabidopsis at night Arabidopsis thaliana
(DORN1, LecRK-I.9, P2K1, AT5G60300) receptor is highly coexpressed with genes encoding JAZ family proteins
(ADO1, FKL2, LKP1, ZTL, AT5G57360) shares TIFY domain for JAZ binding Nicotiana attenuata
(MYC3, AT5G46760) is induced to about two-fold at 2 h MeJA treatment (MYC3, AT5G46760) expression level
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is strong responder to exogenous MeJA
DELLA repressors and JAZ proteins interaction regulates JA signaling
CORONATINE-INSENSITIVE1 (COI1, AT2G39940) and cofactors leads to degradation of JAZ
JAZ protein modification by downstream signaling factors promotes formation of COI1-JAZs complex
JAZ competes with mediator complex (MED25, PFT1, AT1G25540)
JA signaling regulates many traits across all plant tissues
inositol polyphosphates is crucial for enhancing COI1-JAZ interactions
JAZ proteins in N. attenuata interact with MYC2b Nicotiana attenuata
JA-Ile is essential for COI1-JAZ interactions
local concentration of JA-Ile can be changed without bulk changes in cellular JA-Ile content
induction of genes encoding basic NbPR3 and NbPR4 proteins is associated with JA-dependent defense responses
Ca2+ elevation through (ATCNGC2, CNGC2, DND1, AT5G15410) is required for activation of JA signaling
cofactor level change contributes to enhancement of COI1-JAZ1 interaction
JAZs in N. attenuata must recruit NINJA-TOPLESS repressor complex Nicotiana attenuata
JA has a physiological role in plant adaptation to low K
JA-Ile promotes physical interaction between (AtJAZ1, JAZ1, TIFY10A, AT1G19180) and (COI1, AT2G39940)
loop region in JAZ degron traps hormone in (COI1, AT2G39940) binding pocket Arabidopsis thaliana
jasmonoyl-L-isoleucine (JA-Ile) is perceived by Skp1-Cullin1-F-box-type (SCF) protein ubiquitin ligase complex SCF COI1−JAZ
ATP-activated JA signaling requires signaling via second messenger trio Ca2+, ROS, and NO
misexpression of (LUX, PCL1, AT3G46640) or (ELF4, AT2G40080) in N. attenuata could illuminate relative importance of direct and indirect functions of (ADO1, FKL2, LKP1, ZTL, AT5G57360) in regulation of other JA-related responses Nicotiana attenuata
pathogen resistance responses activated by (COI1, AT2G39940) agonist are similar to observed in j1256 line Arabidopsis thaliana
(FER, AT3G51550) phosphorylates and destabilizes (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
ABA receptors in Arabidopsis participate in transcriptional regulation of JA-responsive genes, including COI, JAZ, and (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
(ERF59, ORA59, AT1G06160) expression in jam x3 is comparable to wild type
degradation of JAZ family repressors relieves transcription factors (TFs) activity for JA-induced defense gene expression Solanum lycopersicum
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is 8–14-fold during 2–12 h JA treatment (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) expression level
ATP-activated JA signaling is early event for synergistic enhancement of JA-mediated plant responses
degradation of JAZ results in activation of JA signaling
(ADO1, FKL2, LKP1, ZTL, AT5G57360) interacts with JAZ proteins
direct enhancement of COI1-JAZ1 complex formation in JA signaling reflects extracellular ATP signaling
basal nicotine biosynthesis is regulated by (ADO1, FKL2, LKP1, ZTL, AT5G57360) targeting a JAZ-MYC2 module Nicotiana attenuata
ZTL-JAZ interaction is hypothesized to regulate phenomena in leaves or flowers
genes involved in JA biosynthesis and JA-signaling targets respond to JA precursor OPDA treatment Arabidopsis thaliana
JAZ proteins represent molecular connection between (COI1, AT2G39940) and (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640)
JA signaling cascades is essential for responses to developmental and environmental cues
(AtJAZ1, JAZ1, TIFY10A, AT1G19180) (JASMONATE ZIM-DOMAIN PROTEIN 1) is repressor of JA-dependent transcription
(AtJAZ1, JAZ1, TIFY10A, AT1G19180) (JASMONATE ZIM-DOMAIN PROTEIN 1) is regulated by JA via protein degradation
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is rapidly induced by MeJA at 0.5 h treatment (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) expression level
(JAZ5, TIFY11A, AT1G17380) shows significantly decreased transcript levels in distal undamaged leaves of atjat3-1;4-1, (ATGLR3.3, GLR3.3, AT1G42540) and atjat3-1;4-1; plants Arabidopsis thaliana
(COI1, AT2G39940) is closely related to (AtTIR1, TIR1, AT3G62980) Arabidopsis thaliana
spr6 is allelic to jai1-1 Solanum lycopersicum
(AtOPR3, DDE1, OPR3, AT2G06050) atjat3-1;4-1 grafted plants show greatly reduced (JAS1, JAZ10, PW220, TIFY9, AT5G13220) transcript levels in scion leaves Arabidopsis thaliana
OsJAZ8 (Os09g0439200; jasmonate ZIM-domain protein) is JA-responsive gene Oryza sativa
(COI1, AT2G39940) JAZ proteins, and (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) define core JA-signaling module
spr6 plants shows dosage-dependent responsiveness to exogenous JA Solanum lycopersicum
OsJAZ8, OsACS6, and OsF3H transcript levels are similarly increased in both Nipponbare and Kasalath cultivars Oryza sativa
(ATLOX1, LOX1, AT1G55020) induce expression of (ATMYB57, MYB57, AT3G01530)
(MYC3, AT5G46760) may act as late-response factor in JA signaling
(AtOPR3, DDE1, OPR3, AT2G06050) WT grafted plants show significantly induced (JAS1, JAZ10, PW220, TIFY9, AT5G13220) transcript levels in scion leaves Arabidopsis thaliana
WRKY group III proteins act as key components of JA signalling
JAZ proteins cannot be inactivated by CORONATINE INSENSITIVE 1 (COI1, AT2G39940) Arabidopsis thaliana
LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700) interacts with (MED25, PFT1, AT1G25540)
(MIR773, MIR773A, AT1G35501) impacts on jasmonic acid (JA), ethylene and salicylic acid (SA) signaling pathways Arabidopsis thaliana
(ATLOX1, LOX1, AT1G55020) induce expression of (AtMYB24, MYB24, AT5G40350)
interaction between JAZ proteins and SCF (COI1, AT2G39940) ubiquitin ligase leads to JAZ degradation via the 26S proteasome Arabidopsis thaliana
OsJAZ8 transcript levels are similarly increased by JA treatment Oryza sativa
fast induction of (AtJAZ1, JAZ1, TIFY10A, AT1G19180) after wounding and herbivore attack is COI1-dependent
(COI1, AT2G39940) homologs have similar roles reported in tomato, tobacco, and soybean Solanum lycopersicum; Nicotiana tabacum; Glycine max
inositol pentakisphosphate is third critical component of the jasmonate co-receptor complex Arabidopsis thaliana
NOMT expression is under the control of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) transcription factor Oryza sativa
(COI1, AT2G39940) might act as part of SCF (Skp/Cullin/F-box) E3 ubiquitin ligase Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is direct target of JAZ proteins
(COI1, AT2G39940) and JAZ complex is true Arabidopsis jasmonate receptor Arabidopsis thaliana
(COI1, AT2G39940) open pocket recognizes with high specificity (3R, 7S)-jasmonoyl-L-isoleucine (JA-Ile) Arabidopsis thaliana
(JAS1, JAZ10, PW220, TIFY9, AT5G13220) shows significantly decreased transcript levels in distal undamaged leaves of atjat3-1;4-1, (ATGLR3.3, GLR3.3, AT1G42540) and atjat3-1;4-1; plants Arabidopsis thaliana
jasmonic acid isoleucine (JA-Ile) facilitates interaction of CORONATINE INSENSITIVE 1 (COI1, AT2G39940) and JAZ repressors
transient assays found no evidence for (JAZ8, TIFY5A, AT1G30135) (JAZ11, TIFY3A, AT3G43440) or (JAZ12, TIFY3B, AT5G20900) being JA-Ile-independent substrates of (COI1, AT2G39940) Arabidopsis thaliana
CORONATINE INSENSITIVE1 (COI1, AT2G39940) mediates response processes in JA signaling
C-terminal end of the LisH domain within the N terminus of TOPLESS (TPL, WSIP1, AT1G15750) is loosely conserved in LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700)
MED25-mediated ME2–MYC2 promoter looping could lead to increased concentrations of COI1 and HAC1 on (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) promoter
(MIR163, AT1G66725) invokes a regulatory module involving jasmonic acid (JA) and salicylic acid (SA) signaling Arabidopsis thaliana
jasmonic acid (JA) is known to integrate plant responses to wounding
JA signaling components are compared between tomato and Arabidopsis Solanum lycopersicum; Arabidopsis thaliana
(COI1, AT2G39940) mutant exhibits JA-insensitive phenotype
jasmonate (JA) is perceived by SCF (COI1, AT2G39940) receptor complex Solanum lycopersicum
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) negatively regulates branch of pathogen-responsive genes Arabidopsis thaliana
transcriptional induction of (AtJAZ1, JAZ1, TIFY10A, AT1G19180) is likely to exert negative feedback regulation during transient JA responses
(DAD1, AT2G44810) induce expression of (AtMYB24, MYB24, AT5G40350)
hormone perception event is tightly coupled with coordinated epigenetic regulation Arabidopsis thaliana
circadian evening complex comprising (LUX, PCL1, AT3G46640) EARLY FLOWERING3 (ELF3, PYK20, AT2G25930) and (ELF4, AT2G40080) binds directly to promoter of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
(COI1, AT2G39940) acting as a JA-Ile receptor operates as ligand-dependent F-box protein in an E3 ligase complex Arabidopsis thaliana
wounding-induced expression of (EMB1691, MTB, AT4G09980) genes is temporally delayed relative to SlMYC2 expression Solanum lycopersicum
temporal delay of (EMB1691, MTB, AT4G09980) gene expression allows appropriate JA response to proceed Solanum lycopersicum
genes displaying 'loss of regulation' upon short-term K re-supply are likely direct targets of JA-signaling
inositol pentakisphosphate interaction with (COI1, AT2G39940) and JAZ occurs adjacent to the ligand Arabidopsis thaliana
OsF3H (Os04g0667200; flavanone 3-hydroxylase) is JA-responsive gene Oryza sativa
low-sakuranetin-accumulating cultivars outside the Kasalath cluster in the NOMT dendrogram (WRC50, 67, 68, 61 and 46) have low NOMT transcript amounts in JA-treated leaves Oryza sativa
jasmonic acid isoleucine (JA-Ile) controls developmental and anti-stress programs
(E,S)-conophthorin prime JA production
regulatory negative feedback loop involving (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) and JAZ proteins provides mechanistic explanation for rapid switch on and off the pathway in response to JA pulse
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) decreases to about eight-fold at 2 h MeJA treatment (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) expression level
accumulation of JAZ proteins would interfere with action of a transcriptional repressor of this group of genes Arabidopsis thaliana
Family enrichment and elevated TIFY expression is consistent with strongly activated JA signaling mediated by ZmPep3 and Gln-18:3 Zea mays
JAZ proteins might accumulate to similar or to only slightly lower levels in roots of (COI1, AT2G39940) -t/ AA lines compared to -t Arabidopsis thaliana
(MED25, PFT1, AT1G25540) is required for MYC2-dependent repression of JA-responsive genes Arabidopsis thaliana
MTB1 negatively regulates JA-mediated transcriptional responses Solanum lycopersicum
(JAS1, JAZ10, PW220, TIFY9, AT5G13220) expression was not strongly affected in plants expressing non-degradable JAZ1Δ3A-GUS Arabidopsis thaliana
putative Thionin gene (AT1G66100) is inducible by MeJA Arabidopsis thaliana
194 genes were also >2-fold regulated by MeJA in gpa1-4 Arabidopsis thaliana
ligand-independent degradation of specific JAZs is unlikely in the (AOS, CYP74A, DDE2, AT5G42650) background Arabidopsis thaliana
residual (COI1, AT2G39940) AA and JAZ interactions might occur at low JA-Ile levels in non-wounded roots Arabidopsis thaliana
jasmonate signaling leads to degradation of MdJAZ2–MdbHLH3 protein complex Malus domestica
degradation of MdJAZ2–MdbHLH3 protein complex releases MdbHLH3 Malus domestica
hormone binding depends on functional (COI1, AT2G39940) protein
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) acts as master regulator of JA responses Arabidopsis thaliana; Solanum lycopersicum
(COI1, AT2G39940) (CORONATINE INSENSITIVE 1) serves as receptor for jasmonate Arabidopsis thaliana
JA transcriptional modulators trigger JA cascade response
volatiles from Trichoderma fungi prime JA-responsive marker genes Arabidopsis thaliana
TOPLESS (TPL, WSIP1, AT1G15750) represses activity of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640)
CORONATINE INSENSITIVE1 (COI1, AT2G39940) is JA signaling receptor
JAZ repressor degradation leads to de-repression of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640)
Gα subunit has role in response of Arabidopsis to MeJA Arabidopsis thaliana
(LCR77, PDF1.2, PDF1.2A, AT5G44420) genes are expressed relatively more strongly in gpa1-1 than in wild-type plants Arabidopsis thaliana
putative Thionin gene expression peaks at ~6 h Arabidopsis thaliana
Gα overexpression is sufficient for induction of (ATVSP1, VSP1, AT5G24780) /2 expression Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) positively regulates branch of wounding-responsive genes Arabidopsis thaliana
LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700) enhances MYC2–MED25–HAC1 interactions
jasmonic acid isoleucine (JA-Ile) is required for interaction between CORONATINE INSENSITIVE 1 (COI1, AT2G39940) and JAZ repressors Arabidopsis thaliana
N-terminal tag on (COI1, AT2G39940) did not affect JA-Ile receptor function of (COI1, AT2G39940) Arabidopsis thaliana
JA-ZIM-domain (JAZ) proteins negatively modulate JA signaling
proteasome degradation of JAZ proteins occurs in response to jasmonates (JAs)
(MED25, PFT1, AT1G25540) is signal-processing and signal-integrating center during JA-regulated gene transcription
mutations in amino acids Glu203 and Tyr302 of (COI1, AT2G39940) interfered with receptor function of (COI1, AT2G39940) Arabidopsis thaliana
(MED25, PFT1, AT1G25540) links MYC2 with HAC1-dependent H3K9 acetylation
LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700) acts as a scaffold to stabilize MMC
TOPLESS (TPL, WSIP1, AT1G15750) is recruited by JAZ proteins
Q-rich domain of LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700) is required for binding to (MED25, PFT1, AT1G25540)
(COI1, AT2G39940) AA mutant protein can only weakly interact with JAZ repressors Arabidopsis thaliana
affected target genes of (COI1, AT2G39940) repression are different from genes of the classical JA response Arabidopsis thaliana
de novo synthesis of stabilized JAZ splice variants exhibits characteristic delays in negative feedback loops Solanum lycopersicum
(ATMKK9, MKK9, AT1G73500) was induced by jasmonic acid (JA) Arabidopsis thaliana
indole enhances JA signaling Zea mays
JASMONATE-ZIM DOMAIN (JAZ) proteins physically recruit TOPLESS (TPL, WSIP1, AT1G15750)
OsWRKY13 mediates negative interaction with JA signaling pathway Oryza sativa
jasmonic acid (JA) levels changes detected in Eui overexpressors
(JAZ8, TIFY5A, AT1G30135) (JAZ11, TIFY3A, AT3G43440) or (JAZ12, TIFY3B, AT5G20900) might be JA-Ile-independent substrates of CORONATINE INSENSITIVE 1 (COI1, AT2G39940) Arabidopsis thaliana
LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700) recruits to (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) target promoters
high SA level in syntaxin double mutant may suppress JA pathway
positional cloning of jai3-1 mutation subsequently identified JAZ family of repressors
SCF (COI1, AT2G39940) directly targets for proteasome degradation (JAI3, JAZ3, TIFY6B, AT3G17860)
(ATLOX1, LOX1, AT1G55020) induce expression of (ATMYB21, ATMYB3, MYB21, AT3G27810)
(MYC3, AT5G46760) fluctuates between 1.5 and two-fold during 2–12 h JA treatment (MYC3, AT5G46760) expression level
(COI1, AT2G39940) protein is JA receptor
jasmonate signaling leads to degradation of JAZ proteins Arabidopsis thaliana
(MED25, PFT1, AT1G25540) ensures finely calibrated outputs of MMC-dependent transcription Arabidopsis thaliana
membrane lipids role in jasmonic acid (JA)-signaling pathway
28 genes upregulated in JA treatment Gossypium hirsutum
(MED25, PFT1, AT1G25540) interactions with diverse transcriptional regulators contribute to amplification of JA signaling transcriptional output
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) and (MED25, PFT1, AT1G25540) form MYC2-MED25 functional transcription complex to regulate JA-responsive gene expression
C-terminal end of the LisH domain within the N terminus of TOPLESS (TPL, WSIP1, AT1G15750) is required for binding to adaptor protein NINJA
jar1-1 mutant introduced into syp121-1 syp122-1 shows no phenotypic consequences syp121-1 syp122-1 phenotypes
nitric oxide (NO) donors strongly inhibits jasmonic acid (JA)-induced proteinase inhibitor expression and activity Solanum lycopersicum
nitric oxide (NO) donors do not alter jasmonic acid (JA)-induced transcript levels of signaling pathway-related genes Solanum lycopersicum
wound-induced JA is known to slow mitosis
NaGSNOR-VIGS plants do not have compromised activity of SCF (COI1, AT2G39940) complex Nicotiana attenuata
eATP treatment activates known genes of the JA pathway Arabidopsis thaliana
jasmonates (JA) results in stronger induction of JA-dependent defenses Zea mays
(MED25, PFT1, AT1G25540) cooperates with hitherto unidentified corepressors Arabidopsis thaliana
MTB3 negatively regulates JA-mediated transcriptional responses Solanum lycopersicum
formation of SlMYC2–SlMED25–MTB autoregulatory feedback circuit is tightly controlled temporal regulation Solanum lycopersicum
increased concentrations of (COI1, AT2G39940) and (ARQ1, HAC1, AT2G21045) on (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) promoter generates activating microenvironment
MeJA-dependent (PDF1.2b, AT2G26020) expression is detectable much earlier in (ATGPA1, GP ALPHA 1, GPA1, AT2G26300) Arabidopsis thaliana
OsWRKY13-associated disease resistance pathway negatively interacts with JA signaling pathway Oryza sativa
PtMYB14 is postulated to contribute to regulation of jasmonic acid (JA) metabolism Picea glauca; Pinus taeda
822 genes were identified that were >2-fold regulated by MeJA in wild-type seedlings Arabidopsis thaliana
NaGSNOR plays role in transducing jasmonic acid (JA) signaling Nicotiana attenuata
JA signaling had potentially anti- and pro-PCD effects of lesion-mimic phenotype Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is homologue of (COI1, AT2G39940) Solanum lycopersicum
basal expression and MeJA-dependent induction of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) / in the gpa1-1 mutant is indistinguishable from that of wild type Arabidopsis thaliana
volatiles from Trichoderma fungi prime defenses Arabidopsis thaliana
jasmonate (JA) regulates plant immunity
MYC2-MED25 complex activates transcription of JA-responsive genes
MYC2–MED25–HAC1 interactions are enhanced by hormone elicitation
(MED25, PFT1, AT1G25540) physically recruits LEUNIG_HOMOLOG (LUH, MUM1, AT2G32700)
HAC1-dependent H3K9 acetylation activates (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) target genes
activating microenvironment promotes (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) expression during transit JA response
jasmonic acid (JA) plays pivotal roles in root regeneration
jasmonic acid (JA) treatment induces GmERF3 expression Glycine max
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) directly represses PLT expression Arabidopsis thaliana
degradation of JAZ repressor proteins leads to activation of JA-responsive genes
miRNAs are responsive to jasmonic acid (JA)
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) binding to G-box-like 1 is necessary but not sufficient for (CYP707A1, AT4G19230) induction by COR Arabidopsis thaliana
Co-overexpression of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) suppresses induction of (LCR77, PDF1.2, PDF1.2A, AT5G44420) by (AtERF#092, ERF1, ERF1B, AT3G23240) Arabidopsis thaliana
17 genes (Cluster IIa and b) showed fold regulation that was twice that of wild type Arabidopsis thaliana
Gα overexpression was sufficient to induce VSP1/2 expression in light but not in darkness Arabidopsis thaliana
jasmonic acid (JA) levels changes detected in eui mutant
gibberellin (GA) may directly modulate jasmonic acid (JA) homeostasis
(COI1, AT2G39940) mutant confirms lack of effect on syp121-1 syp122-1 phenotypes
JA regulation of seedling and root growth is one of the most well examined phenotypes in Arabidopsis Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) positively induces (ATVSP1, VSP1, AT5G24780) Arabidopsis thaliana
Gα overexpression increases (LCR77, PDF1.2, PDF1.2A, AT5G44420) Arabidopsis thaliana
31 genes were <2-fold regulated in gpa1-4 (Cluster I) Arabidopsis thaliana
JA is plant signaling compound that induces resistance to pathogens
loss of the Gα subunit affects JA-responsive gene expression Arabidopsis thaliana
altered basal expression of JA-regulated genes in (ATGPA1, GP ALPHA 1, GPA1, AT2G26300) mutants is most likely to have resulted from alteration in sensing of or response to JA Arabidopsis thaliana
each OsCOI's ability to bind to different ligands and JAZ proteins may mediate expression of different downstream genes Oryza sativa
OsCOI1b's dominant role in developmental responses is consistent with results of other studies Oryza sativa
jasmonic acid (JA) has role in reproduction and development
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) transcript level is reduced in (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant
GOLDEN2-LIKE (GLK) have diverse roles in jasmonic acid signaling
JAMs and (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) antagonistically regulate (ATVSP2, VSP2, AT5G24770) expression
mechanism underlying bifurcation of JA and JA-ET branches depends in part on JAZ proteins Arabidopsis thaliana
specific JAZ subtypes exert selective control over two sectors of immunity Arabidopsis thaliana
PtrWRKY89 overexpression does not change levels of AOS7 and (JAS1, JAZ10, PW220, TIFY9, AT5G13220) involved in JA signalling pathway Populus trichocarpa
JA both is required for and promotes thigmomorphogenetic alterations in Arabidopsis Arabidopsis thaliana
Gα-overexpressing plants accumulated significantly increased level of (ATVSP1, VSP1, AT5G24780) /2 Arabidopsis thaliana
loss of the Gα subunit affects MeJA-regulated gene expression Arabidopsis thaliana
OsCOI1a, OsCOI1b, and OsCOI2 in turn regulate different sectors of JA signaling Oryza sativa
VmSpm1 reduces JA biosynthesis and signaling Valsa mali
OsCOI1a and OsCOI1b are involved in JA perception Oryza sativa
OsCOI2 partnered with most individual OsJAZ proteins Oryza sativa
concentrations of bioactive JAs increase in rice at particular developmental stages Oryza sativa
JA-mediated expression of (ATMYB44, ATMYBR1, MYB44, MYBR1, AT5G67300) occurs through COI1-dependent pathway Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) (MYC3, AT5G46760) and (MYC4, AT4G17880) display specific functions JA response Arabidopsis thaliana
JA-deficient (AOS, CYP74A, DDE2, AT5G42650) mutant repressed one new miRNA, one tasiRNA family, and 22 known miRNAs Arabidopsis thaliana
constitutive expression of JA-responsive genes is observed in (ATMYB44, ATMYBR1, MYB44, MYBR1, AT5G67300) knockout mutants Arabidopsis thaliana
OsCOI2 plays diverse roles in regulating downstream JA responses Oryza sativa
MdPYL4 degradation by VmSpm1 results in suppressed JA response Malus domestica
JAZs heterodimerize and interact with other transcriptional regulators Arabidopsis thaliana
(bHLH003, bHLH03, bHLH3, JAM3, AT4G16430) transcript level is reduced in (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant
JA biosynthesis and signaling pathways play key roles in RKN resistance of rice root system Oryza sativa
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) plays an important role in root Arabidopsis thaliana
loss in the expression of JA-responsive genes negatively affected plant growth
(MIR319, MIR319B, AT5G41663) expression declined after JA treatment Solanum lycopersicum
JA–isoleucine conjugate (JA-Ile) binds to COI-1 receptor
coi-1 mutant showed loss in the expression of JA-responsive genes
RaVSP2 is JA-responsive gene Rorippa aquatica
(AOS, CYP74A, DDE2, AT5G42650) (ATLOX1, LOX1, AT1G55020) and (AtJAZ1, JAZ1, TIFY10A, AT1G19180) constitutively upregulated in cotton roots after silencing TC141300 Gossypium hirsutum
31 genes responsive to JA treatment Gossypium hirsutum
selected candidates in cotton exhibited clear responses to JA (jasmonic acid) treatment Gossypium hirsutum
plants perceive JA signal
(ANAC019, ANAC19, NAC019, AT1G52890) (ANAC055, ANAC55, ATNAC3, NAC055, NAC3, AT3G15500) and (ANAC072, ANAC72, AtRD26, RD26, AT4G27410) are induced in expression following jasmonic acid (JA) treatment Arabidopsis thaliana
48 out of 247 (19%) MeJA-regulated genes were misregulated in gpa1-4 Arabidopsis thaliana
ATP induces secretion of extrafloral nectar
biosynthesis of TPIs is regulated by JA signaling
(ATWRKY70, WRKY70, AT3G56400) is also repressor of JA-responsive genes Arabidopsis thaliana
TIC repressed inhibition of JA on root growth in a MYC2-dependent manner Arabidopsis thaliana
NlMLP appears to induce defense responses mediated by JA signaling pathway
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) has been shown to regulate synthesis of volatile terpenes
defense-related metabolites regulated by JA signaling oscillate and are abundant at midday
uptake of JA-Ile into the nucleus is preferentially enhanced by (ABCG16, AtABCG16, ATJAT1, JAT1, AT3G55090)
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) has been shown to regulate synthesis of glucosinolates
expressed (ATMYB44, ATMYBR1, MYB44, MYBR1, AT5G67300) regulates suppression of JA-mediated defense genes (ATVSP1, VSP1, AT5G24780) and (LCR77, PDF1.2, PDF1.2A, AT5G44420) Arabidopsis thaliana
TaMPK6 is induced by JA signaling Triticum aestivum
active JA pathway is required for wound-induced growth retardation
JA (jasmonic acid) response genes are downregulated and then maintained at low expression levels SOM7 cluster Rorippa aquatica
jasmonic acid (JA) transcript levels were the same in different genotypes Solanum lycopersicum
CORONATINE-INSENSITIVE1 (COI1, AT2G39940) binds with JASMONATE (AtTIFY1, GATA25, TIFY1, ZIM, AT4G24470) DOMAIN (JAZ) proteins
(ADO1, FKL2, LKP1, ZTL, AT5G57360) could compete with NINJA Nicotiana attenuata
metabolic shifts that prioritize defense responses to various aggressors mediated by JAZ subtypes working through distinct TFs Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) overexpression was accompanied by coordinated upregulation of defensive genes Populus trichocarpa
MYC transcription factors activate JA-responsive genes
biosynthesis and signaling mutants fueled discovery of an impressive catalog of traits regulated by JA signaling
RaVSP1 is JA-responsive gene Rorippa aquatica
(bHLH, AT5G51780) TF family members (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) and its homologs (MYC3, AT5G46760) (MYC4, AT4G17880) and (ATNIG1, bhlh28, MYC5, NIG1, AT5G46830) may bind directly to promoters of JA-mediated defense-related genes
basal fluctuations in JA signaling may explain circadian regulation of resistance to T. ni Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) is enriched at G-box-like 1 motifs Arabidopsis thaliana; Eutrema salsugineum
significant increase in JA content occurred in both GPA-resistant and -susceptible cultivars Prunus persica
loss in the expression of JA-responsive genes negatively affected resistance to herbivores
mechanically stimulated plants, with elevated JA may be primed for defense against pests
red light and MeJA simultaneous treatment attenuates effect of JA Rorippa aquatica
JA production from mechanical damage was lesser extent compared with actual aphid infestation Prunus persica
lack of touch-induced phenotypes in (AOS, CYP74A, DDE2, AT5G42650) (AtGH3.11, FIN219, JAR1, AT2G46370) and (COI1, AT2G39940) indicates that thigmomorphogenesis is not a passive consequence of mechanostimulus-induced damage but is instead an active, JA-regulated response Arabidopsis thaliana
JA has also been implicated in more specialized plant touch responses, including tendril curling of Bryonia dioica and Venus flytrap closure Bryonia dioica; Venus flytrap
JA signaling was activated by Spodoptera litura treatment Medicago sativa
genes whose expression is induced by touch overlap with wound-responsive genes induced by JA
Capsella rubella and Eutrema salsugineum are capable of sensing COR (coronatine) Capsella rubella; Eutrema salsugineum
touch-induced resistance is JA dependent jasmonate (JA) Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) (transcription factor) binds to G-box, G-box-like 1, and G-box-like 2 motifs Arabidopsis thaliana
(AOS, CYP74A, DDE2, AT5G42650) is required for the full touch inducibility of (CML39, AT1G76640) expression Arabidopsis thaliana
JA response genes suggest possible antagonistic role for JA signaling/response during submerged leaf development Rorippa aquatica
TIC represses (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) protein accumulation in JA signalling Arabidopsis thaliana
JA content decreases during senescence and N deprivation Arabidopsis thaliana
exogenous MeJA up-regulates (EEP1, MIR164, MIR164C, AT5G27807) and (MIR390, MIR390B, AT5G58465) Taxus chinensis
(MYC3, AT5G46760) responds to exogenous MeJA in mild expression pattern
OsCOI2 is functional JA receptor Oryza sativa
bioactive JAs could be perceived by OsCOI1a, OsCOI1b, and OsCOI2 Oryza sativa
contrasting defense and metabolic phenotypes of j1256 and jazQ support hypothesis that JAZ subtypes work through distinct TFs to mediate metabolic shifts Arabidopsis thaliana
jasmonate (JA)-triggered degradation of JAZ proteins serves to increase the abundance of growth-repressing DELLA proteins
F-box-containing evening component (ADO1, FKL2, LKP1, ZTL, AT5G57360) interacts directly with JAZ proteins
clock-related gene TIME FOR COFFEE (TIC) acts as suppressor of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
jai1-1 is loss-of-function allele of CORONATINE-INSENSITIVE1 (COI1, AT2G39940) Solanum lycopersicum
NOMT enzymatic activity in JA-treated leaves is induced by JA Oryza sativa
OsCOI1b's dominant role in developmental responses includes root growth Oryza sativa
different OsCOI-OsJAZ combinations allow individual or combinations of OsCOIs to regulate downstream developmental and defense responses Oryza sativa
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) and JAM genes function antagonistically root growth
MJ and Suc treatments affect VSP expression level in Arabidopsis Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) has major role in mediating JA-induced root growth inhibition Arabidopsis thaliana
(ERF59, ORA59, AT1G06160) expression in myc2jam x3 is significantly higher than (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant
JAMs have negative effect on PDF1.2 and ORA59 only in (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) background
JAZ repressor degradation activates diverse JA responses Arabidopsis thaliana
JAZ proteins interact with Polycomb factors including (AtLHP1, LHP1, TFL2, AT5G17690) and PRC2 Arabidopsis thaliana
newly synthesized JAZ proteins reloading the repressive chromatin modifiers leads to desensitization of the cell to JA Arabidopsis thaliana
Individual JAZs at discrete target loci may engage one or a combination (two or three) of these mechanisms for transcriptional repression Arabidopsis thaliana
(CLF, ICU1, SDG1, SET1, AT2G23380) and (AtLHP1, LHP1, TFL2, AT5G17690) primary roots display a hypersensitive response to JA treatment Arabidopsis thaliana
(ATMYB44, ATMYBR1, MYB44, MYBR1, AT5G67300) activated by JA acts as negative regulator to fine-tune JA signal Arabidopsis thaliana
TaMPK6 interacts with TaICE41 Triticum aestivum
OsCOI2 can bind to OsJAZ proteins Oryza sativa
oscoi1a mutants engages herbivore resistance traits Oryza sativa
OsCOI1b with JA-Ile interacts with OsJAZ3, 4, 6, 7, and 11 Oryza sativa
majority of JAZs play overlapping roles in different JA responses
jasmonate (JA) stimulates degradation of JASMONATE ZIM-DOMAIN (JAZ) proteins
differences in protein–protein interaction potential may differentially control JA responses Arabidopsis thaliana
increased auxin levels and root growth inhibition may contribute to growth and defense phenotypes of jaz mutants Arabidopsis thaliana
modulation of JA levels by VmPR1c affects plant resistance to AVC Malus domestica
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) has negative effect on (ERF59, ORA59, AT1G06160) expression
JAM and (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) proteins do not represent a typical downstream-upstream relationship downstream-upstream relationship
OsCOI2 is JA receptor Oryza sativa
endogenous JA ligands facilitate OsCOI2 binding to OsJAZs Oryza sativa
OsCOI1a and OsCOI1b play overlapping roles in herbivore resistance Oryza sativa
tissue-specific patterns of expression regulate a particular sector of JA signaling in a particular tissue
OsCOI2 shows specificity in regulating senescence Oryza sativa
this study investigated roles of three OsCOIs in broader JA responses Oryza sativa
tissue or cell-type-specific expression likely contributes to variable function of MYC paralogs Arabidopsis thaliana
jam x3 mutant has shorter root length than wild type on MJ-containing medium
MdNAC72 involved in JA signaling response Malus domestica
OsCOI1b is JA receptor Oryza sativa
OsCOI2 could accept more JA-AA mimics as ligands Oryza sativa
PtMYC2.1 and PtMYC2.2 directly control expression of a subset of JA-responsive genes, including TFs and defence genes Populus trichocarpa
approach of leveraging Mendelian segregation could be applied to any JA-mediated phenotype exhibited by jazD Arabidopsis thaliana
metabolic reprogramming induced by methyl jasmonate (MeJA) affects plant metabolism and growth
OsCOI1a and OsCOI1b play redundant roles in spikelet development Oryza sativa
JASMONATE ZIM-DOMAIN (JAZ) proteins repress activity of MYC transcription factors
JAZ proteins impose hierarchical control over JA and JA-ET branches by repressing MYC and (AtEIN3, EIN3, AT3G20770) (AtEIL1, EIL1, AT2G27050) TFs Arabidopsis thaliana
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) coordinates induced systemic resistance caused by beneficial microorganisms Arabidopsis thaliana
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) expression is induced by drought stress
JA-Ile activates jasmonate signaling
JAM-MYC2 antagonism is not seen on (AtERF#092, ERF1, ERF1B, AT3G23240) expression
(MED25, PFT1, AT1G25540) modulates expression of transcription factors such as (AtERF#092, ERF1, ERF1B, AT3G23240) and (ERF59, ORA59, AT1G06160) Arabidopsis thaliana
role for JA in plant mechanoresponses may be widespread
(ANAC019, ANAC19, NAC019, AT1G52890) (ANAC055, ANAC55, ATNAC3, NAC055, NAC3, AT3G15500) and (ANAC072, ANAC72, AtRD26, RD26, AT4G27410) are induced by COR (coronatine) Arabidopsis thaliana
ATP induces expression of JA-induced genes
ZEITLUPE (ADO1, FKL2, LKP1, ZTL, AT5G57360) has new functions in JA signaling regulation Nicotiana attenuata
basal levels of JA-Ile are low or below detection limit in leaves and roots of N. attenuata Nicotiana attenuata
JA-Ile has greater bioactivity Oryza sativa
genetic tools for further explorations are provided by this study Oryza sativa
post-translational modification may differentially control JA responses Arabidopsis thaliana
PtJAZ6 represses MYC activity Populus trichocarpa
LbMiSSP7-PtJAZ6 interaction does not affect PtJAZ6-PtJAM1.1 interaction Populus trichocarpa; Laccaria bicolor
(bHLH013, bHLH13, JAM2, AT1G01260) expression is induced by drought stress
genes involved in JA biosynthesis and JA-signaling targets respond to methyl-jasmonate (MeJA) treatment Arabidopsis thaliana
SCF (COI1, AT2G39940) directly targets for proteasome degradation other JAZ proteins
(DAD1, AT2G44810) induce expression of (ATMYB21, ATMYB3, MYB21, AT3G27810)
(bHLH003, bHLH03, bHLH3, JAM3, AT4G16430) transcript level is reduced in coi1-1 mutant
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) expression is COI1 dependent (COI1, AT2G39940)
negative effect of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) on (AtERF#092, ERF1, ERF1B, AT3G23240) expression is more apparent 3 h after JA treatments
JA-Ile promoted more OsCOI2-OsJAZs interactions Oryza sativa
Y386H substitution is between OsCOI2 and other classical COI1s Oryza sativa
selective chemical agonist of CORONATINE INSENSITIVE 1 (COI1, AT2G39940) -mediated (JAZ9, TIFY7, AT1G70700) degradation activates pathogen resistance responses Arabidopsis thaliana
(bHLH013, bHLH13, JAM2, AT1G01260) expression is induced by methyl jasmonate (MJ) treatment
Mediator complex functions antagonistically to JAM genes Arabidopsis thaliana
genes associated with MeJA-induced peaks show significantly larger fraction with increased expression in Col-0 plants treated with MeJA Arabidopsis thaliana
MeJA-induced root growth inhibition is significantly alleviated in hyl1-2 mutant Arabidopsis thaliana
OsCOI2 binds to OsJAZs Oryza sativa
OsCOI2 can bind to endogenous ligands Oryza sativa
OsCOI1b's dominant role in developmental responses includes seed size Oryza sativa
JAZ and MYC paralogs regulate production of amino-acid-derived defense compounds Arabidopsis thaliana
basic helix-loop-helix (bHLH) transcription factors (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) (MYC3, AT5G46760) (MYC4, AT4G17880) or (ATNIG1, bhlh28, MYC5, NIG1, AT5G46830) activate different sets of JA-responsive genes
(bHLH013, bHLH13, JAM2, AT1G01260) expression is induced by wounding stress
12-OH-JA may be a metabolic form to transmit JA signaling to distal parts of plants
MYC TFs are differentially repressed by JAZ proteins Arabidopsis thaliana
secretion of effectors by pathogens interferes with JA biosynthesis and signaling
oscoi2 mutants regulate leaf senescence Oryza sativa
recombinant protein NlVgN treatment up-regulates OsJAZ11 Oryza sativa
MdPYL4-promoted JA synthesis and signaling enhances resistance to Valsa mali Malus domestica; Valsa mali
CORONATINE INSENSITIVE (COI)-receptors and JAZ proteins activate downstream JA responses
(FER, AT3G51550) inhibits by phosphorylating and destabilizing (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640)
(ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant has longer root length than wild type on MJ-containing medium
(LCR77, PDF1.2, PDF1.2A, AT5G44420) expression in myc2jam x3 is significantly higher than (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant
Arabidopsis ABA receptor (PYL6, RCAR9, AT2G40330) interaction with (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) promotes differential gene expression Arabidopsis thaliana
(bHLH013, bHLH13, JAM2, AT1G01260) transcript level is reduced in (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) mutant
JAM genes have functions antagonistic to (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640)
Avh94 interaction with (AtJAZ1, JAZ1, TIFY10A, AT1G19180) /2 proteins prevents degradation of (AtJAZ1, JAZ1, TIFY10A, AT1G19180) /2 proteins by 26S proteasome Phytophthora sojae
(bHLH003, bHLH03, bHLH3, JAM3, AT4G16430) plays an important role in regulating JA-responsive genes
(MED25, PFT1, AT1G25540) directly binds to (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) Arabidopsis thaliana
OsCOI1a plays diverse roles in regulating downstream JA responses Oryza sativa
understanding of JA signaling in monocot species is enriched by this study Oryza sativa
genetic tools enable further explorations of broader biological functions of JA in rice Oryza sativa
interaction between PtJAZ6 and PtMYC2.1 and PtMYC2.2 is particularly strong with PtMYC2.1 Populus trichocarpa; Laccaria bicolor
pathogens have developed various ways to counteract JA-induced defenses
(AIB, ATAIB, bHLH017, bHLH17, JAM1, AT2G46510) transcript level is reduced in coi1-1 mutant
six selected loci exhibited apparent reduction in (AtLHP1, LHP1, TFL2, AT5G17690) enrichment in examined gene-body regions following 3-hour JA application Arabidopsis thaliana
increase in JA led to apparent overall reduction in (AtLHP1, LHP1, TFL2, AT5G17690) enrichment in 3675 loci Arabidopsis thaliana
functional release of the JAZ-inhibited transcription factors results in transcriptional activation Arabidopsis thaliana
JAZ proteins repression of transcriptional responses to JA involves direct binding of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640)
elimination of JAZ repressors frees (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) transcription factor Arabidopsis thaliana
lower NOMT expression in Kasalath is not due to intrinsically lower JA response Oryza sativa