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gene expression

111874 relationships annotated with this phrase. Showing first 500 of 111874.
Source entity Relationship Target entity Species
ProSMR13:nlsGFP-GUS reporter indicates expression in longitudinal gradient starting in transition zone of root meristem Arabidopsis thaliana
pro Mp PIN1: Mp PIN1-Citrine is expressed in gemmaling apex Marchantia polymorpha
ftsZ gene expression level was similar in 7942M and WT Synechococcus 7942
(UGT73C6, AT2G36790) is expressed at very low levels in seeds Arabidopsis thaliana
Osmotin1, Osmotin2, and Osmotin3 show almost no expression in Hvtdf1-2 mutant Hordeum vulgare
MmNec3 expression is very low in presecretory nectaries and leaves Melianthus minor
transcripts of variants FtVar4,5 were not detected Fagopyrum tataricum
GFP signals in anthers from COM-L transgenic Arabidopsis were stronger than GFP signals in anthers from COM-C transgenic Arabidopsis Arabidopsis thaliana
row2 expression showed double level in (ATBARD1, BARD1, ROW1, AT1G04020) deletion strain Ustilago maydis
SDE2C does not suppress firefly luciferase reporter gene expression Arabidopsis thaliana
Pt9029 upregulates expression of TaRCA Triticum aestivum
Pt9029 expression is upregulated at 12 hpi in THTT-Tc interaction Triticum aestivum; Puccinia triticina
MdSWEET15a expression is lower in fruit tissues of low-fructose hybrid 'F1-89' Malus domestica
VvPIP1-2;1-4 mRNA levels were approximately 2^3 to 2^6 greater than other VvPIP1 isogenes Vitis species
VvPIP2-1 and VvPIP2-2 mRNA levels were approximately 4- to 32-fold greater than other VvPIP2 isogenes Vitis species
oeWHY1-HA6 overexpression line shows increased transcript levels of (ATWHY1, PTAC1, WHY1, AT1G14410) Arabidopsis thaliana
expression of RhNAC100m transgene in RhNAC100m/ (ATEIN2, CKR1, EIN2, ERA3, ORE2, ORE3, PIR2, AT5G03280) 21.5- to 29.7-fold of RhNAC100/Col (#18) plants Arabidopsis thaliana
(XXT3, AT5G07720) is expressed specifically in bud and stem Arabidopsis thaliana
transcripts of all five XXTs are present at significantly lower levels of (XXT3, AT5G07720) and (XXT4, AT1G18690) Arabidopsis thaliana
isoforms are usually not distinguished for verification of gene expression
pAtTGS1:AtTGS1-GUS reporter lines GUS staining patterns showing accumulation in ovule containing a MMC Arabidopsis thaliana
Osmotin1 is identified from screening and shows similar WT expression patterns as HvTDF1 Hordeum vulgare
synthesized OSCs (SnOSCs) were inserted into pPICZ α A vector
m8-2 mutant has 2990 differentially expressed genes Phaeodactylum tricornutum
FaEGS1a expression is lower in other plant tissues Fragaria × ananassa
(ATCNGC15, CNGC15, AT2G28260) is highly expressed in guard cells Arabidopsis thaliana
OsCIPK33-IR isoform decreased unless OsSR45 was present in the transfection reaction Oryza sativa
regulated transcripts often encode proteins with kinase activity or transcription factors Arabidopsis thaliana
ProSMR13:nlsGFP-GUS reporter in XVE-SCL28 plants treated with β-estradiol displays increased expression of ProSMR13:nlsGFP-GUS reporter Arabidopsis thaliana
synpcc7942_0085 (0085) expression level was detected in 7942M and WT cells Synechococcus 7942
(DFR, M318, TT3, AT5G42800) has reduced expression in (DFR, M318, TT3, AT5G42800) line no. 39 Gentiana triflora
RT-qPCR experiment detected expressions of other HTB genes in the (HTB4, AT5G59910) mutant Arabidopsis thaliana
Atbuzz T-DNA alleles do not contain detectable full-length transcript Arabidopsis thaliana
expression level of MpFPPS1 of MpnDV-positive individuals significantly higher than MpnDV-negative individuals Myzus persicae
OsGPX1 has expression level 36.5-fold higher expression in shoots than OsASTOL1 Oryza sativa
FT transcripts were present at very low levels in leaves Triticum monococcum
OsHMA5 is expressed in parenchyma cells of vascular tissues in rachis Oryza sativa
VvPIP isogenes mRNA levels varied significantly longitudinally along the length of the root Vitis species
(AtNPF1.2, NPF1.2, NRT1.11, AT1G52190) and (NRT1.12, AT3G16180) are expressed in larger expanded leaves with maximal levels in leaves 5 and 6
gRNA-resistant Mp (ATPIN1, PIN1, AT1G73590) genomic sequence including an internal Citrine fluorescent reporter gene translational fusion driven by endogenous pro Mp (ATPIN1, PIN1, AT1G73590) promoter Marchantia polymorpha
(ATMAPK6, ATMPK6, MAPK6, MPK6, AT2G43790) is co-expressed with (CLL2, EPFL4, AT4G14723) (CLL1, EPFL5, AT3G22820) (AtEPFL6, CHAL, EPFL6, AT2G30370) and ERECTA Arabidopsis thaliana
Blumeria effectors were shown to be differentially expressed in haustoria Blumeria graminis
(EPC1, GMT1, AT3G55830) showed active transcription Colletotrichum orbiculare
expression levels of SEpro : SE-YFP , HYL1pro : HYL1-YFP , and DCL1pro : 3xVENUS-N7 are much lower in (ARP6, ATARP6, ESD1, SUF3, AT3G33520) er-119 (ATXR3, SDG2, AT4G15180) ovules Arabidopsis thaliana
Hap-1 was more highly expressed than Hap-2 Glycine max; Glycine soja
pAtTGS1:AtTGS1-GUS reporter lines GUS staining patterns showing accumulation in placenta and ovule primordium Arabidopsis thaliana
Osmotin3 is identified from screening and shows similar WT expression patterns as HvTDF1 Hordeum vulgare
ALMT13 transcripts were detected in guard cells of single mutant (ALMT12, ATALMT12, QUAC1, AT4G17970) Arabidopsis thaliana
dtn1-2 mutant shows decreased expression levels of (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) Oryza sativa
PsSOC1 expression levels in transgenic plants were 1.5-fold higher than control in most transgenic plants Populus abla × P. glandulosa
EARLY-FLOWERING 3 (ELF3, PYK20, AT2G25930) express at moderate to high levels in mature guard cells Arabidopsis thaliana
SOC1-1 and (LFY, LFY3, AT5G61850) were significantly up-regulated in apices in response to GA treatment Triticum monococcum
why1-1 mutant produces single weak transcript of (ATWHY1, PTAC1, WHY1, AT1G14410) Arabidopsis thaliana
rhd3-8 mutant shows decreased (GOM8, RHD3, AT3G13870) mRNA Arabidopsis thaliana
AZG1pro:GUS staining in primary root apical meristem was relatively evenly distributed primary root apical meristem Arabidopsis thaliana
HMGB1-OE3 and HMGB1-OE5 overexpression lines show higher levels of OsHMGB1 transcripts Oryza sativa
BUZZ is expressed above background in panicle Brachypodium distachyon
PsPALM1a and PsPALM1b are barely detectable in roots, stems, flowers, pods and seed coats Pisum sativum
MdNINV6 expression is downregulated in silenced fruits Malus domestica
Vitis species plasma membrane aquaporin (VvPIP) isogenes had tissue-specific mRNA levels that varied significantly between tissue types within different root zones Vitis species
atgatl5-2 mutant expresses (AtGATL5, GATL5, AT1G02720) mRNA Arabidopsis thaliana
PpPINA (Pp3c23_10200) is the highest expressed gene of the three PIN genes Physcomitrella patens
BvCYP76AD6 is highly expressed in petals of Bx no. 7 Gentiana triflora
Petroselinum (PTS) increased abundance of KNOX5 transcripts
ROS accumulation in tapetum layer from stage 7 to 9 corresponds to specific expression patterns of oxidoreductase and peroxidase genes Hordeum vulgare
heavy metal transport protein is highly induced in secretory and postsecretory nectaries over presecretory nectaries and leaves Melianthus minor
majority of DEGs in eob2-1 knockout and eob2-3 LofTAD was upregulated gene expression Petunia axillaris
AhCQ2G6Y has higher transcript abundance in H108 plants compared to H107 plants Arachis hypogaea
remaining (CYP86, CYP86A1, HORST, AT5G58860) genes could not be identified in RNA-sequencing analysis Populus trichocarpa
FT transcript levels in photoperiod-sensitive sister lines were undetectable at all stages of the day Triticum turgidum
SOC1-1 and (LFY, LFY3, AT5G61850) were significantly up-regulated in apices of photoperiod-insensitive tetraploid Kronos plants Triticum turgidum
(ATCNGC1, CNGC1, AT5G53130) is expressed in guard cells Arabidopsis thaliana
brassinosteroids (BRs) regulation occurs through altered expression of many genes
GRMZM2G150374_T04 was preferentially expressed in wild-type coleoptilar nodes at t4 Zea mays
SCL28-VENUS is detected in epidermis of developing leaves Arabidopsis thaliana
BvCYP76AD6 is highly expressed in petals of Bx no. 13 Gentiana triflora
reduced function mutations in (DALL2, AT1G51440) alone did not strongly affect (JAS1, JAZ10, PW220, TIFY9, AT5G13220) expression in leaves distal to wounds Arabidopsis thaliana
qRT-PCR analysis showed that CCD1 expression level is several-fold higher in expanded than wrapped petals Brassica juncea
pAtTGS1:AtTGS1-GUS reporter lines GUS staining patterns showing accumulation in young ovules before MMC differentiation Arabidopsis thaliana
(ATGSL04, atgsl4, CALS8, GSL04, gsl04, GSL4, AT3G14570) expression dysregulation was observed in homozygous app1D plants
VvPIP1-2;1-4 in secondary growth zone was the most prominently expressed isogene in other tissues Vitis species
(ATCNGC20, CNBT1, CNGC20, AT3G17700) is highly expressed in guard cells Arabidopsis thaliana
recombinant (ATHSFA2, HSFA2, AT2G26150) unable to up-regulate endogenous (ATHSFA2, HSFA2, AT2G26150) Arabidopsis thaliana
(CHS4, LSD1, AT4G20380) and FKS1 expression was similar in P131, Δ Moemc5, and Δ Moemc2 Magnaporthe oryzae
CER-ZA/HvFAR1 displays moderate expression in the leaves and coleoptiles Hordeum vulgare
expression of (ACBP3, AT4G24230) in floral tissue from Ler-0 differs from expression of (ACBP3, AT4G24230) in floral tissue from Col-0 Arabidopsis thaliana
3203 differentially expressed genes (DEGs) comprised 1526 upregulated and 1677 downregulated genes in the mutant line Oryza sativa L. ssp. japonica
amino acid transporter (AAP2, AT5G09220) is expressed in phloem of leaf major vein
CYS D1 transcript is not up-regulated in oastlAC B +/− mutant Arabidopsis thaliana
A2QK-7 transgenic line has high expression level of (ATHSFA2, HSFA2, AT2G26150) Arabidopsis thaliana
BvCYP76AD6 is scarcely expressed in leaves of Bx no. 13 Gentiana triflora
(DFR, M318, TT3, AT5G42800) has reduced expression in Bx no. 13 Gentiana triflora
pre-mRNA splicing determines combinations of sequences in individual mRNA
pAtTGS1:AtTGS1-GUS reporter lines GUS staining patterns showing accumulation in ovule containing a mature MMC Arabidopsis thaliana
consistent set of four genes ( (S8H, AT3G12900) (ATFRO2, FRD1, FRO2, AT1G01580) 2× (ATIRT1, IRT1, AT4G19690) ) is differentially expressed in all four mutants Populus × canescens
semi-quantitative reverse transcription polymerase chain reaction confirmed that all three genes are expressed in germinated spores and during infection Plasmopara viticola
(LFY, LFY3, AT5G61850) expression was significantly higher in Vrn1g plants than in wild-type plants under short day conditions Triticum monococcum
AtRPL10s are expressed in leaves, roots, stems, and flowers Arabidopsis thaliana
two β-form maize (RCA, AT2G39730) cDNAs show different sequences at 3′ UTRs Zea mays
DAGK transcripts in N-DGD1 and tpATS1 chloroplasts were present and shown to encode functional enzyme Arabidopsis thaliana
(ATHSFA2, HSFA2, AT2G26150) transcripts not detected in QK mutant Arabidopsis thaliana
(AGL8, FUL, AT5G60910) and AG RNA levels in curled cauline leaves were no higher in curled cauline leaves of (AGL15, AT5G13790) (AGL18, AT3G57390) (AGL24, AT4G24540) (AGL22, FAQ1, SVP, AT2G22540) plants Arabidopsis thaliana
expression of C3H1 was significantly higher in atr2-2 Arabidopsis thaliana
(AtSEC24A, ERMO2, SEC24A, AT3G07100) shows high expression in distal root region Arabidopsis thaliana
rNAD-ME1 and rPPDK1 lines displayed general reduction in transcript levels of KfPPC1_CAM Kalanchoe fedtschenkoi
StCLV2 is expressed in multiple tissues including root tissue Solanum tuberosum
(RPL27A, RPL27AB, uL15y, AT1G23290) gene promoters are expressed in all cells of the ovule Arabidopsis thaliana
some NEP genes, such as (RPOC2, ATCG00170) ycf1, and ycf2 were up-regulated in (EMB2279, EMB88, SOT5, AT1G30610) Arabidopsis thaliana
high GFP fluorescence indicates uniform expression of TaALMT1-GFP in four species Secale cereale; Brachypodium distachyon; Arabidopsis thaliana; Nicotiana benthamiana
NbHIPP26 vascular tissue-specific expression is similar to AtHIPP26 expression Nicotiana benthamiana; Arabidopsis thaliana
transcription factors represent high specificity Glycine max
NaCl treatment for 30 h does not cause abundant (WDL5, AT4G32330) transcript in ein3eil1 seedlings Arabidopsis thaliana
absence of differentially methylated region results in unblocked transcription Arabidopsis thaliana
upregulated genes in RNAi-ddm1 include transporter genes and transcription factor genes Populus tremula × Populus alba
(At-SCL28, SCL28, AT5G18810) mRNA in distal leaf sample is at lower levels than (At-SCL28, SCL28, AT5G18810) mRNA in proximal leaf sample Arabidopsis thaliana
synpcc7942_0081 (0081) expression level was detected in 7942M and WT cells Synechococcus 7942
gene expression does not necessarily correlate with protein activity
(DALL1, PLA-I[beta]2, AT4G16820) mutants have slightly enhanced JAZ10 expression in leaves distal to wounds (JAS1, JAZ10, PW220, TIFY9, AT5G13220) expression Arabidopsis thaliana
RNA-seq analysis of WT and zmbell10-1 young stalks identified 3728 differentially expressed genes Zea mays L.
NCR343 is the most highly expressed among NCR peptides with similar sequences Medicago truncatula
(ALMT12, ATALMT12, QUAC1, AT4G17970) transcript detected in WT guard cells Arabidopsis thaliana
CDT1-CFP line (G1 marker) shows presence of multiple (ATRAD51, RAD51, AT5G20850) mRNAs and active transcription sites Arabidopsis thaliana
highly pure wild-type and Osalkbh5 meiocytes at early Prophase I were collected and sequenced to identify differentially expressed genes (DEGs) Oryza sativa L. ssp. japonica
SOC1-3 transcript levels showed similar pattern but differences were not significant between Vrn1g and wild-type plants Triticum monococcum
flx4-3 mutant shows transcript levels similar to wild type Arabidopsis thaliana
three genes (clone 9.45, clone 24.04, clone 27.18) up-regulated in aposporous initial (AI) cell Hieracium praealtum
(AGL25, FLC, FLF, RSB6, AT5G10140) expression in shoot tips of srpkii-1 is > 14-fold higher than in Col-0 Arabidopsis thaliana
expression of MoMNR2 is no difference between P131 and mutants Magnaporthe oryzae
AtTGS1 RT-PCR for Arabidopsis tissues Arabidopsis thaliana
WT and ispE-1 mutant lines treated with DTT or inoculated with PlAMV-GFP or TuMV-GFP showed no changes in bZIP60U or bZIP60S expression Arabidopsis thaliana
(ATRAD51, RAD51, AT5G20850) mRNAs and transcription sites are detected in CDT1-positive cells Arabidopsis thaliana
two isoforms of AhMYB2 were strongly expressed in flower tissue Amaranthus hypochondriacus
four additional SLAC/SLAH family members (CrSLAC1c-f) were identified and expressed in C. richardii sporophytes and/or gametophytes Ceratopteris richardii
all of these genes were able to be isolated from gametophyte tissues Sphagnum fallax; Anthoceros agrestis
(ATCNGC6, CNGC6, AT2G23980) is highly expressed in guard cells Arabidopsis thaliana
HMW1Dx5 promoter drives strong expression at 10 (DPA, AT5G02470) under standard conditions Triticum aestivum
FLM-β and FLM-δ are downregulated in srpkii-1 mutant Arabidopsis thaliana
downregulated genes in RNAi-ddm1 include (ATDDM1, CHA1, CHR01, CHR1, DDM1, SOM1, SOM4, AT5G66750) Populus tremula × Populus alba
PpPINC expression is absent in stem, rhizoids and older phyllids Physcomitrella patens
RNA-seq analysis detected 933 upregulated and 618 downregulated genes in white petals at (DAF1, MIF1, AT3G62230) stage Brassica juncea
HMGB1-OE5 overexpression line shows sevenfold higher levels of OsHMGB1 transcripts than WT Oryza sativa
RAD51-GFP mRNA shows higher abundance in stele Arabidopsis thaliana
NbAPX3-1-silenced leaves transcriptional level of NbAPX3-1 was dramatically reduced compared with TRV-GFP control Nicotiana benthamiana
liquid-liquid phase separation (LLPS) regulates translation Arabidopsis thaliana
Pt9029 expression peaks at 12 hpi in JHKT-Tc interaction Triticum aestivum; Puccinia triticina
FaEGS2 is expressed in receptacle Fragaria x ananassa
CYS C1 transcript is increased by 1.5-fold in oastlAC B +/− mutant Arabidopsis thaliana
sor1-d mutation causes overexpression of (ATCHX24, CHX24, AT5G37060) Arabidopsis thaliana
(EIF4E1B, AT1G29550) gene appears to be expressed at low levels in most tissues Arabidopsis thaliana
(XXT5, AT1G74380) expression is highest in roots Arabidopsis thaliana
BvCYP76AD6 is scarcely expressed in leaves of Bx no. 7 Gentiana triflora
(AtSWEET9, SWEET9, AT2G39060) has low expression in presecretory nectaries and leaves Melianthus minor
EOB1 and EOB2 is not detected in roots Petunia axillaris
differentially expressed genes in eob2-1 knockout comprised 23% of genes Petunia axillaris
one CYP86B1_2 allele is strongly up-regulated in mutant cyp86a1_1;b1_1 Populus × canescens
ACBP3pro (Col)::GUS expression in Col-0 does not show GUS signals in anthers Arabidopsis thaliana
double level row2 expression compensated for loss of (ATBARD1, BARD1, ROW1, AT1G04020) Ustilago maydis
PsCYCD3.3 transgenic buds had higher expression levels than controls (empty pBI121-transformed buds) Paeonia suffruticosa
RNA-seq analysis identified 3203 differentially expressed genes (DEGs) Oryza sativa L. ssp. japonica
DEK58 transcript could be detected in major maize organs Zea mays
OsHMA5 is expressed in parenchyma cells of vascular tissues in peduncle Oryza sativa
day 0 showed no detectable PaFTL2 expression Picea abies
5′ untranslated region insertion in cngc5-2 shows greatly reduced transcripts for two different primer pairs Arabidopsis thaliana
GRMZM2G070603_T01 was preferentially expressed in wild-type coleoptilar nodes at t4 Zea mays
regenerated thalli have conspicuous expression Marchantia polymorpha
ZmCOBL expression in ZmBELL10-OE1 is highly expressed compared to WT Zea mays L.
RNA-sequencing data of 5-wk-old roots did not indicate indirect effect of mutation on aquaporin expression Populus trichocarpa
light treatment increases expression levels of DTN1 Oryza sativa
SOC1-3 expression showed no changes in (AGP4, ATAGP4, JAGGER, AT5G10430) FT-OE and photoperiod-insensitive Kronos plants Triticum aestivum; Triticum turgidum
awhy1-6 antisense line shows reduced (ATWHY1, PTAC1, WHY1, AT1G14410) transcript levels Arabidopsis thaliana
(ATCNGC1, CNGC1, AT5G53130) is highly expressed in guard cells Arabidopsis thaliana
ShMKS2 promoter is strongly active in type VI trichomes in cultivated tomato Solanum lycopersicum
flg22 induces (ATFLS2, FLS2, AT5G63580) mRNA accumulation Arabidopsis thaliana
(ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) demonstrates relatively low level of expression in root tissue Arabidopsis thaliana
inactivation of the stress-inducible alternative oxidase 1a (AOX1A, ATAOX1A, AtHSR3, HSR3, AT3G22370) gene was shown to comprehensively alter the transcriptome Arabidopsis thaliana
KinG promoter (2-kb genomic fragment upstream of ATG) was used to drive expression of HISTONE 2B-YFP (KinG:H2B-YFP) Arabidopsis thaliana
expression of MIL2 shows no significant changes in osers1 mutant compared with wild type Oryza sativa
cellotriose (CT) or chitin application results in increased number of genes responding with longer incubation periods gene expression response Arabidopsis thaliana
(GUN1, AT2G31400) mRNA is present at high levels in all tissues Arabidopsis thaliana
centromeric lincRNAs were not expressed in all samples Glycine max
high number of perfect correlations was due to high tissue specificity of lincRNA expression Glycine max
HvCSLC3 shows higher transcript levels than HvCSLC2 Hordeum vulgare
HvCSLC1 shows labeling in all cell types Hordeum vulgare
auxin response factors (ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) and (ARF11, ARF19, IAA22, AT1G19220) are identified as up-regulated in (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) seedlings
(XXT3, AT5G07720) expression has lower expression detected in pedicel and flower Arabidopsis thaliana
PpPINC promoter line showed citrine fluorescence in apices of young phyllids Physcomitrella patens
PpPINC is more divergent and less expressed Physcomitrella patens
ProSCL28:SCL28-VENUS reporter displays reduced but detectable expression in transition and elongation zones of root Arabidopsis thaliana
ALMT13 transcript detected in WT guard cells Arabidopsis thaliana
OsSYP132 is expressed in spikelets, leaves, stems and nodes Oryza sativa
(ATHSF3, ATHSFA1B, HSF3, HSFA1B, AT5G16820) was significantly upregulated in three (ATHSF3, ATHSFA1B, HSF3, HSFA1B, AT5G16820) overexpression lines Phaeodactylum tricornutum
SOC1-1 and (LFY, LFY3, AT5G61850) were significantly up-regulated in apices in response to long day treatment Triticum monococcum
PsGA3ox1 overexpression transgenic lines produce elevated levels of PsGA3ox1 transcripts
Athda7-2 mutant shows strong down-regulation of (AtHDA7, HDA7, AT5G35600) Arabidopsis thaliana
(ATHDA6, AXE1, HDA6, HDAC6, RPD3B, RTS1, SIL1, AT5G63110) is significantly up-regulated in Athda7-2 mutant Arabidopsis thaliana
RNAi-ddm1 and OX-dml lines show 1451 and 528 poplar DEGs respectively Populus tremula × Populus alba
PpPINB (Pp3c24_2970) has lower but similar expression to PpPINA (Pp3c23_10200) Physcomitrella patens
plants lacking ITPA showed downregulation of 28 transcripts Arabidopsis thaliana
ProSMR13:nlsGFP-GUS reporter in scl28-3 displays reduced GFP levels with similar distribution but lower levels at every position Arabidopsis thaliana
ZmPME expression in ZmBELL10-OE1 is highly expressed compared to WT Zea mays L.
oxidoreductase and peroxidase genes show specific expression patterns in wild-type RNAseq data Hordeum vulgare
atams mutant shows MYB80 is not expressed (AtMYB103, ATMYB80, MS188, MYB103, MYB80, AT5G56110) Arabidopsis thaliana
alternative splicing (AS) is crucial for gene expression
other heavy metals and ferrous and cupric ions do not affect (MIR400, AT1G32582) host gene expression Arabidopsis thaliana
MmNec3 is highly expressed in secretory and postsecretory nectaries Melianthus minor
EOB1 and EOB2 is detected in petal tube Petunia axillaris
(ATGSL04, atgsl4, CALS8, GSL04, gsl04, GSL4, AT3G14570) expression dysregulation was observed in heterozygous app1D −/+ plants
enriched GO terms were shared between upregulated DEGs in MpPUB9-overexpressing plants and downregulated DEGs in mppub9 mutant plants Marchantia polymorpha
AtHMA5 is mainly expressed in roots and flowers Arabidopsis thaliana
VvPIP1-1 was the only VvPIP1 family member with significant differences in mRNA levels between tissues in the maturation zone Vitis species
RU02822 encodes putative protein containing 339 amino acids
RhNAC100 detected in petals, leaves, and roots of rose
fern actin promoter is active in two fern species at each life stage
endogenous (FLL4, FLX4, AT5G61920) expression is similar in FRI-Col and early-flowering T2 plants Arabidopsis thaliana
RNA-seq identified 515 differentially expressed genes Arabidopsis thaliana
SlSKOR expression was similar in 1.4 K and 0 K 3 h solutions Solanum lycopersicum
levels of the flanking exon of OsCIPK33 are lower in osfkbp20-1b mutant Oryza sativa
PpPINC expression in protonema is very low protonema Physcomitrella patens
ProSCL28:SCL28-VENUS reporter confirms expression pattern with highest levels in cell proliferation domain of root meristem Arabidopsis thaliana
ZmBELL10 overexpression lines have highly increased ZmBELL10 transcript levels Zea mays L.
(AMS, AT2G16910) expression in barley is reduced but not completely absent in hvtdf1 mutant Hordeum vulgare
barley (AtMYB103, ATMYB80, MS188, MYB103, MYB80, AT5G56110) orthologous gene is not expressed hvtdf1 mutant Hordeum vulgare
Cd stress causes significant increase in primary (MIR400, AT1G32582) transcript level Arabidopsis thaliana
(UBP15, AT1G17110) did not alter TRI4 transcription levels Fusarium graminearum
some OSCs are highly expressed in specific tissues of rice cultivars Oryza sativa
Apical transcript levels of (REM39, VRN1, AT3G18990) were significantly higher in photoperiod-insensitive plants Triticum turgidum
VvPIP expression patterns were compared with orthologous Arabidopsis genes Vitis species; Arabidopsis thaliana
(AtHDA7, HDA7, AT5G35600) oe mutant shows 246-fold increase in (AtHDA7, HDA7, AT5G35600) expression Arabidopsis thaliana
protoplasts expressing OsWRKY55 and OsWRKY55-IR show lower target gene expression compared with the GFP negative control Oryza sativa
transcript levels between the two fusion constructs are not significantly different each other Arabidopsis thaliana
dtn1-2 mutant shows lower expression levels of (AtGRF4, GRF4, AT3G52910) in axillary buds Oryza sativa
ACBP3pro (Col)::GUS expression in Col-0 is consistent with microarray data from TAIR and previous GUS staining results on fully-open Col-0 flowers Arabidopsis thaliana
30 candidate proteins expressed under cauliflower mosaic virus (CaMV) 35S promoter Nicotiana benthamiana
VvPIP mRNA levels in maturation and meristematic/elongation zones ranged from 2^15 to 2^25 copies mm^-3 Vitis species
oeWHY1-HA5 overexpression line shows increased transcript levels of (ATWHY1, PTAC1, WHY1, AT1G14410) Arabidopsis thaliana
CcCCD4b nucleotide sequence encoded putative protein of 560 amino acids Citrus clementina
(ATXT1, AtXXT1, XT1, XXT1, AT3G62720) and (ATXT2, AtXXT2, TXT2, XT2, XXT2, AT4G02500) are distinct in expression and distribution in Arabidopsis tissues Arabidopsis thaliana
OsCIPK33-IR isoform showed constant abundance Oryza sativa
(AtbZIP, bZIP, AT1G68880) transcription factors (ATF6, (BZIP28, AT3G10800) (BZIP17, AT2G40950) ) in the nucleus regulate transcription
buzz mutant root tips have upregulated 478 transcripts Brachypodium distachyon
lower proportion of DEGs in eob2-3 LofTAD is in line with partial activity of eob2-3 LofTAD Petunia axillaris
(HY3, OOP1, PHYB, AT2G18790) express at moderate to high levels in mature guard cells Arabidopsis thaliana
349 and 358 differentially expressed genes (DEGs) were identified in 35S:MpPUB9-3xFlag transgenic and mppub9 mutant plants Marchantia polymorpha
VvPIP2-1 and VvPIP2-2 were the most prominently expressed isogenes within VvPIP2 family Vitis species
trx3-1 trx4-1 [ SRKb-SCRb ] plants lack (ATH3, ATTRX3, ATTRXH3, TRX3, TRXH3, AT5G42980) and (ATH4, ATTRX4, AT1G19730) transcripts Arabidopsis thaliana
oeWHY1-HA6 overexpression line shows enhanced (ATWHY1, PTAC1, WHY1, AT1G14410) transcript levels Arabidopsis thaliana
(AtNPF2.13, NPF2.13, NRT1.7, AT1G69870) is expressed in older leaves with maximal levels in leaves 1 and 2
guard cell-specific microarray sets identified (ATCNGC1, CNGC1, AT5G53130) (ATCNGC2, CNGC2, DND1, AT5G15410) (ATCNGC5, CNGC5, AT5G57940) (ATCNGC6, CNGC6, AT2G23980) (ATCNGC15, CNGC15, AT2G28260) and (ATCNGC20, CNBT1, CNGC20, AT3G17700) genes Arabidopsis thaliana
(ML3, AT5G23820) was differentially expressed in comparison of (NAI1, AT2G22770) mutants with wild type Arabidopsis thaliana
expression level of (AGL25, FLC, FLF, RSB6, AT5G10140) but not the alternative splicing of FLC was significantly upregulated in srpkii-1 mutant seedlings Arabidopsis thaliana
OsFKBP20-1b and OsSR45 co-transfection resulted in transcript isoforms undergoing intron retention accumulating to levels comparable to those observed with the single OsSR45 transfection Oryza sativa
(At-SCL28, SCL28, AT5G18810) mRNA is detected in distal root samples Arabidopsis thaliana
expression of N. benthamiana genes encoding homologues of PG-associated fibrillins increased in crtB samples at 96 hpi Nicotiana benthamiana
BUZZ mRNA is largely confined to epidermis Brachypodium distachyon
bzip60-2 specifically knocks out expression of bZIP60S protein Arabidopsis thaliana
dtn1-2 mutant shows lower expression levels of (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) in axillary buds Oryza sativa
VvPIP expression in outer cell layers of secondary growth zone was undetected in outer cell layers Vitis species
(ATCNGC5, CNGC5, AT5G57940) gene was less clearly affected in cngc5-2 cngc6-2 double mutant Arabidopsis thaliana
spatiotemporal expression of each AtRPL10 examined using transgenic plants expressing Pro (RPL10, RPL10A, SAC52, uL16z, AT1G14320) GUS fusions Arabidopsis thaliana
PpPINC promoter line did not show citrine fluorescence in protonema, rhizoids, stems, and adult phyllids under standard growth conditions Physcomitrella patens
About 7-d pf, the collar grows out to surround the egg and calyptra, becoming the pseudoperianth with ubiquitous but unpolarised MpPIN1-Citrine expression Marchantia polymorpha
OE lines show enhanced expression of Bg_9562 Solanum lycopersicum
(PYR1, RCAR11, AT4G17870) expression in guard cells was revealed by promoter-GUS analysis Arabidopsis thaliana
Pt9029 expression peaks at 120 hpi in THTT-Tc interaction Triticum aestivum; Puccinia triticina
GA20ox genes expression showed no significant difference between photoperiod-sensitive and -insensitive sister lines Triticum turgidum
oeWHY1-HA5 overexpression line shows enhanced (ATWHY1, PTAC1, WHY1, AT1G14410) transcript levels Arabidopsis thaliana
(ATAZG1, AZG1, AT3G10960) was expressed in all tissues tested Arabidopsis thaliana
co-expression of (ATMAPK6, ATMPK6, MAPK6, MPK6, AT2G43790) with (CLL2, EPFL4, AT4G14723) (CLL1, EPFL5, AT3G22820) (AtEPFL6, CHAL, EPFL6, AT2G30370) and ERECTA in developing filaments indicates (ATMEK4, ATMKK4, MKK4, AT1G51660) /MKK5-MPK6 cascade acts downstream of EPFL4-6 signaling pathway Arabidopsis thaliana
different (H2B, HTB2, AT5G22880) variants have different spatiotemporal expression patterns Arabidopsis thaliana
pAtTGS1:AtTGS1-GUS reporter lines GUS staining patterns showing accumulation in postmeiosis ovules containing a surviving megaspore and three degenerated spores Arabidopsis thaliana
HORVU5Hr1G089230 has transcript abundance clearly downregulated in cer-za.227 bulk compared with Bowman Hordeum vulgare
CER-ZA/HvFAR1 and CER-YE/HvKCS1 are likely expressed in leaf epidermis Hordeum vulgare
EOB1 and EOB2 is detected in pistil Petunia axillaris
protein expression in Col-0/pMRK1:MRK1-GFP transgenics was very low compared to Col-0/35S:MRK1-GFP Arabidopsis thaliana
OsALKBH5 mRNA in vegetative tissues is expressed despite OsALKBH5 protein was poorly expressed outside anthers Oryza sativa L. ssp. japonica
VvPIP2-2 and VvPIP2-3 had mRNA levels that varied significantly between tissues in the maturation zone Vitis species
VvPIP1-2 mRNA levels was expressed at levels nearly 100-fold lower in older root zones Vitis species
FaEGS1a expression is markedly higher in fruit tissue Fragaria × ananassa
Arabidopsis ovule-expressed sequences represented 83%–90% Arabidopsis thaliana
94003 progeny expresses 30158 genes Salix purpurea
13 annotated poplar genes are mostly expressed genes Populus tremula × Populus alba
relative transcript levels of OsRD22, OsSGRL, and OsGUN4 decreased in both osfkbp20-1b mutants compared with WT Oryza sativa
PpPINC expression occurs in young Physcomitrella phyllids Physcomitrella patens
CER-ZA/HvFAR1 (locus BART1_0-p38542) displays low transcript abundance in the roots, apical meristems, spikes, anthers/microspores grains/seeds Hordeum vulgare
homozygous T3 Arabidopsis plants expressing 35S:StbZIP60 in the Atbzip60-2 background fail to produce full length or truncated AtbZIP60U or AtbZIP60S transcripts Arabidopsis thaliana
light treatment increases expression levels of MOC2 Oryza sativa
OsSYP132 shows higher expression in stem bases and roots at seedling stage Oryza sativa
GDS gene transcript levels peak in S1 and S2 flower heads Tanacetum cinerariifolium
whole-genome gene expression levels in MpPUB9-overexpressing transgenic and mppub9 mutant plants were investigated compared to WT plants Marchantia polymorpha
liquid-liquid phase separation (LLPS) regulates transcription Arabidopsis thaliana
SOC1-2 expression showed significant decrease in (AGP4, ATAGP4, JAGGER, AT5G10430) FT-OE plants Triticum aestivum
transcription levels of (ALMT9, AtALMT9, AT3G18440) WT and K193E after coinfiltration were verified Nicotiana benthamiana
close functional identity between aposporous initial (AI) cells and early aposporous embryo (EAE) sacs does not necessarily mean the same genes are expressed in both samples Hieracium praealtum
number of blue fluorescent cells in onion tissues increased steadily for 4 days after bombardment Allium cepa
different CKX genes have different expression patterns Oryza sativa
major band of 53 kD was present at lower levels in stamens and tepals Crocus sativus
OsERS1 is expressed at high levels in young tissues including seedlings and young inflorescences Oryza sativa
LRX8–11 are found to be highly expressed in mature pollen Arabidopsis thaliana
GhPMEI3-silenced plants show higher relative expression of GhPME31 Gossypium hirsutum
(ATFP6, AtHMP40, FP6, HIPP26, AT4G38580) is expressed in other vascular parenchyma cells
lincRNA tissue expression patterns were compared with expression patterns of protein-coding genes representing different specificity groups Glycine max
OsPIN genes are expressed in vascular tissues in stem-base Oryza sativa
wild-type Physcomitrella patens contains significantly higher transcript abundances for (ATFTSZ2-1, FTSZ2-1, AT2G36250) than for (FTSZ2-2, AT3G52750) Physcomitrella patens
HvCSLC2 sequences show high level of representation among barley CSLC ESTs Hordeum vulgare
canonical PIN proteins have similar expression pattern regarding tissue and ecotype Physcomitrella patens
displacement from cup and landing on substrate results in gradient of PIN expression Marchantia polymorpha
(AT-POX, ATPDH, ATPOX, ERD5, PDH1, PRO1, PRODH, AT3G30775) is significantly highly expressed in pods of the domesticated accessions of lima bean Phaseolus lunatus
CER-ZA and CER-YE bands were observed in epidermal tissue Hordeum vulgare
BUZZ mRNA is present in meristem, elongation zone, and growing root hairs of early maturation zone Brachypodium distachyon
epidermal expression of WT NA results in significant increase in level of NA transcript Pisum sativum
ERF.C1-OE-A and ERF.C1-OE-B express more than 50-fold higher SlERF.C1 than WT tomato Solanum lycopersicum
young and mature potato plants have higher expression of StbZIP60 in flowers, roots, and tubers than in leaves Solanum tuberosum
dtn1-2 mutant shows lower expression levels of NGR5 in axillary buds Oryza sativa
RNA-seq analysis found 5718 DEGs (1845 upregulated and 3873 downregulated) Arabidopsis thaliana
Vitis species had high levels of all PIPs in the xylem Vitis species
why1-2 mutant produces single weak transcript of (ATWHY1, PTAC1, WHY1, AT1G14410) Arabidopsis thaliana
(ATCNGC6, CNGC6, AT2G23980) gene was clearly reduced in cngc5-2 cngc6-2 double mutant Arabidopsis thaliana
DAGK-encoding construct was expressed in all lines Arabidopsis thaliana
(PAT24, TIP1, AT5G20350) ;1 gene is expressed at higher levels in R plants Solanum lycopersicum
(BAM1, AT5G65700) promoter is active in mesophyll cells
chloroplast FNR is encoded by (ATLFNR1, FNR1, LFNR1, AT5G66190) and (ATLFNR2, FNR2, LFNR2, AT1G20020) Arabidopsis thaliana
novel hypomorphic allele of GDSL lipase carries splice junction mutation Solanum lycopersicum
(PME35, PME61, AT3G59010) alleles produce full-length transcripts Arabidopsis thaliana
rNAD-ME1 and rPPDK1 lines displayed general reduction in transcript levels of KfNAD_ME_a1 Kalanchoe fedtschenkoi
LesaPME11580 transcript stayed at same level at two time points in RAD Lepidium sativum
AtLIP2 gene shows little expression in roots and flowers Arabidopsis thaliana
(ATN, ATTAN, TAN1, AT3G05330) transcripts do not accumulate in nondividing tissues Arabidopsis thaliana
wheat seeds inoculated with γ2: TaALMT1 results in higher abundance of TaALMT1 transcripts Triticum aestivum
(GUN1, AT2G31400) gene is highly expressed at transcriptional level Arabidopsis thaliana
LRX genes are expressed in pollen (male gametophyte) Arabidopsis thaliana
almost two-thirds (41) of 64 transcripts were already significantly different from wild type in nonacclimated state Arabidopsis thaliana
(AtSIP2, RS2, SIP2, AT3G57520) was the 1,465th highest expressed gene at T0 (time 0, control condition) Arabidopsis thaliana
(AT-HSFB1, ATHSF4, HSF4, HSFB1, TBF1, AT4G36990) mRNA is expressed at low levels in wild-type plants at 22°C Arabidopsis thaliana
(AT-HSFB1, ATHSF4, HSF4, HSFB1, TBF1, AT4G36990) /B2b double knockout mutant shows no detectable (AT-HSFB1, ATHSF4, HSF4, HSFB1, TBF1, AT4G36990) or (AT-HSFB2B, HSF7, HSFB2B, AT4G11660) mRNAs at control temperature or after heat stress Arabidopsis thaliana
(ATCBF3, CBF3, DREB1A, AT4G25480) cDNA cloned downstream of strong constitutive super promoter
(ATSOS2, CIPK24, SNRK3.11, SOS2, AT5G35410) T168D S228A transcript is more abundant than wild-type (ATSOS2, CIPK24, SNRK3.11, SOS2, AT5G35410) transcript
constructs lacking the repeat region became biallelically expressed
(ATHD1, ATHDA19, HD1, HDA1, HDA19, HDAC19, RPD3A, AT4G38130) may positively regulate transcription Arabidopsis thaliana
(ROXY1, AT3G02000) transcripts are detected only in Arabidopsis wild-type plants Arabidopsis thaliana
HvCSLC expression pattern is generally consistent with qPCR results Hordeum vulgare
HvGT1 shows correlation coefficient of 0.82 with HvCSLC1 Hordeum vulgare
OsNF-YA4-IR1 and OsWRKY55-IR isoforms accumulated to lower levels in the two osfkbp20-1b mutants compared with WT under the same conditions Oryza sativa
CER-ZA and CER-YE bands were absent from roots or residual leaf material Hordeum vulgare
AhCQ2G6Y was significantly upregulated in H108 Arachis hypogaea
(bHLH, AT5G51780) and WD40 transcription factors are constitutively expressed
PsGA3ox1 (LE) expression driven by endogenous promoter produces markedly lower PsGA3ox1 transcript abundance per internode
cngc5-1 cngc6-1 double mutant shows greatly reduced or abolished mRNA levels of (ATCNGC5, CNGC5, AT5G57940) and (ATCNGC6, CNGC6, AT2G23980) Arabidopsis thaliana
A2QK-9 transgenic line has low expression level of (ATHSFA2, HSFA2, AT2G26150) Arabidopsis thaliana
(ATHD1, ATHDA19, HD1, HDA1, HDA19, HDAC19, RPD3A, AT4G38130) is down-regulated in Athda7-2 mutant Arabidopsis thaliana
(BAM3, AT4G20270) mRNA amount in cold-stressed plants increased Arabidopsis thaliana
OsPP18 is relatively highly expressed in leaves at secondary-branch primordium differentiation stage Oryza sativa
ospp18 mutant has altered expression levels of 54 up-regulated genes and 163 down-regulated genes Oryza sativa
young leaves contain 285 ± 19 µg total RNA g −1 fresh weight Hypoxis prostrata
LG3 was detected in (B73, CHL6, CNX, CNX1, SIR4, AT5G20990) leaves Zea mays
rNAD-ME1 and rPPDK1 lines displayed general reduction in transcript levels of KfPPDK Kalanchoe fedtschenkoi
(ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) promoter-GUS fusion (pPDX1.3:GUS) shows much weaker activity in roots Arabidopsis thaliana
MtSTM expression level is elevated in vegetative shoot buds in mtphan mutant Medicago truncatula
MtKNOX6 expression level is elevated in vegetative shoot buds in mtphan mutant Medicago truncatula
(ATZFP2, ZFP2, AT5G57520) transcription is high in flowers and developing seeds Arabidopsis thaliana
AtLIP2 gene is much more strongly expressed in leaves Arabidopsis thaliana
OsCKX4 gene was driven using root-specific promoter RCc3 Oryza sativa
tissue-specific expression pattern of CsCCD2, CsALDH3I1, and CsUGT74AD1 was analyzed in flowers of C. sativus Crocus sativus
transcript levels of endogenous loci were higher in (AtSAMS3, MAT4, MTO3, SAMS3, AT3G17390) than in L119 but lower than in (ATDDM1, CHA1, CHR01, CHR1, DDM1, SOM1, SOM4, AT5G66750) Arabidopsis thaliana
mCherry and GFP fluorescent reporters are inserted into RNAγ1 (γ1: mCherry) and RNAγ2 (γ2: GFP) Triticum aestivum
cellotriose (CT) cooperates with chitin to induce (ATRBOHD, DELT1, RBOHD, AT5G47910) expression Arabidopsis thaliana
VdPG1 is expressed at relatively low level in lines 3 and 5 Arabidopsis thaliana
lincRNAs have higher tissue specificity than any of the protein-coding gene groups Glycine max
salt stress does not affect (AtEIN3, EIN3, AT3G20770) expression Arabidopsis thaliana
(ALB4, ARTEMIS, STIC1, AT1G24490) depletion line #771 shows slightly higher transcript levels of atp gene transcripts
AGPSEMZM mRNA does not accumulate in mature leaf Zea mays
(PME35, PME61, AT3G59010) alleles are null alleles of (PME35, PME61, AT3G59010) Arabidopsis thaliana
the DMC1pr line exhibited significantly higher levels of INP1 expression compared to the INP1pr line
(EMB2279, EMB88, SOT5, AT1G30610) gene encodes only one protein with 978 amino acid residues Arabidopsis thaliana
four-component BSMV vector system is able to successfully coexpress two genes in planta Triticum aestivum
N. benthamiana plants expressing (ATFP6, AtHMP40, FP6, HIPP26, AT4G38580) promoter-reporter fusions revealed vascular tissue-specific expression Nicotiana benthamiana
high tissue-specific lincRNA expression allows for possibility of using lincRNAs as tissue type and state markers Glycine max
IDS1 expression was blocked in ids1-1 mutant Oryza sativa
release of translational regulation could lead to further enhanced expression Oryza sativa
OsROXY1 transcripts are strongly expressed in ROXY1:OsROXY1 transgenic plants Arabidopsis thaliana
OsROXY2 transcripts are strongly expressed in ROXY1:OsROXY2 transgenic plants Arabidopsis thaliana
(SAP2, AT1G03220) showed highest transcript abundance in planta Arabidopsis thaliana
FtsZ2 genes relative expression levels grouped by gene family Physcomitrella patens
proteins containing TPR domains participate in RNA metabolism
genes without LBD promoter element are overrepresented among differentially expressed genes Zea mays
35S:WRKY45-18 :: pht1;1 double mutant has overexpressed (ATWRKY45, WRKY45, AT3G01970) Arabidopsis thaliana
(AtCLA1, CLA, CLA1, DEF, DXPS2, DXS, DXS1, AT4G15560) transcript levels measured in (AtCLA1, CLA, CLA1, DEF, DXPS2, DXS, DXS1, AT4G15560) mutant and transgenic lines Arabidopsis thaliana
(AGL7, AP1, AtAP1, AT1G69120) FRUITFUL (AGL8, FUL, AT5G60910) PI, and AGAMOUS (AG) RNA levels in curled rosette leaves were as low or lower in curled rosette leaves of (AGL15, AT5G13790) (AGL18, AT3G57390) (AGL24, AT4G24540) (AGL22, FAQ1, SVP, AT2G22540) plants Arabidopsis thaliana
truncated (AR2, ATR2, AT4G30210) transcripts detected in both (AR2, ATR2, AT4G30210) mutant alleles Arabidopsis thaliana
cold stress had stabilizing effect on (BAM3, AT4G20270) mRNA Arabidopsis thaliana
OsPP18 is very highly expressed in stamen at 1 d before flowering Oryza sativa
expression of Z1C genes in K0326Y is still substantial Z1C gene expression level Zea mays
PMEI proteins are produced second phasic accumulation pattern Lepidium sativum
ACTIN DEPOLYMERIZING FACTOR 3 (ADF3, AT5G59880) is expressed throughout Arabidopsis development in most organs Arabidopsis thaliana
(ADO1, FKL2, LKP1, ZTL, AT5G57360) transcripts do not fluctuate in root Nicotiana attenuata
chitin induces rapidly (ATRBOHD, DELT1, RBOHD, AT5G47910) mRNA level Arabidopsis thaliana
different CalS are expressed in tissue-specific way Arabidopsis thaliana
nuclear association of plant RNA virus components can manipulate transcriptional regulation
centromeric lincRNA expression was observed, similar to rice and maize Oryza sativa; Zea mays
NpGUT1 gene is highly expressed in tapetum Nicotiana plumbaginifolia
NtFT1, NtFT2, and NtFT3 are expressed in companion cells Nicotiana sylvestris
construct containing repeats but lacking DNA methylated region downstream was biallelically expressed
(ATPT1, PHT1;1, PT1, AT5G43350) is mainly expressed in root tips Arabidopsis thaliana
no significant changes in LCIA or other potential inorganic carbon transporter genes at transcriptional level have been detected under very low CO2 conditions Chlamydomonas reinhardtii
Bt2b transcript is present in embryo Zea mays
(TAP46, AT5G53000) is highly expressed in seeds Arabidopsis thaliana
expression level of (EAL1, SGR7, SHR, AT4G37650) in (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) in presence of sucrose (Suc) at 5 days after germination (DAG) is reduced approximately 8-fold in pdx1.3 compared with wild type Arabidopsis thaliana
(EAL1, SGR7, SHR, AT4G37650) expression in (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) at 10 days after germination (DAG) also increases 3-fold toward wild-type levels Arabidopsis thaliana
not all transcript and protein abundances correlated well Arabidopsis thaliana
RT-PCR confirmed that STTM165/166 was expressed in TRV-STTM165/166 plants Nicotiana benthamiana
genes belonging to categories of photosynthetic proteins, transcription factors, and cell wall proteins are the most enriched in P– (AQC1, HPS7, TPST, AT1G08030) compared with P+ Arabidopsis thaliana
(INP1, AT4G22600) must be expressed from diploid genome
TaALMT1 is cloned into γ1 (γ1: TaALMT1) and γ2 (γ2: TaALMT1) vectors Triticum aestivum
89, 128, and 149 lincRNAs were expressed in leaf only, SAM only, and leaf and SAM, respectively Glycine max
transcription of BADC genes shows no significant changes in (BADC1, BLP3, AT3G56130) (BADC3, BLP2, AT3G15690) cell line Arabidopsis thaliana
expression construct pCB2009 is used for driving candidate genes Oryza sativa
transgenic plants overexpressing (ATNHX7, ATSOS1, SOS1, AT2G01980) + (ATSOS2, CIPK24, SNRK3.11, SOS2, AT5G35410) + (ATSOS3, CBL4, SOS3, AT5G24270) express (ATSOS2, CIPK24, SNRK3.11, SOS2, AT5G35410) Arabidopsis thaliana
paramutagenic repeats are transcribed transcription
Lin6 transcript level was not altered in LeHT1-silenced R plants [R(i): TRV-LeHT1] Solanum lycopersicum
FT transcript levels increased between 6 and 10 d in all genotypes Arabidopsis thaliana
OsTIFY11a is down-regulated by ospp18 mutant Oryza sativa
(ATLFNR1, FNR1, LFNR1, AT5G66190) encodes AtFNR1 Arabidopsis thaliana
(ATLFNR2, FNR2, LFNR2, AT1G20020) encodes AtFNR2 Arabidopsis thaliana
Arabidopsis genome encodes (AtSEC24A, ERMO2, SEC24A, AT3G07100) to SEC24D Arabidopsis thaliana
(AtSEC24A, ERMO2, SEC24A, AT3G07100) is expressed through all developmental stages Arabidopsis thaliana
T-DNA insertion mutants (1,084 published) 14% showed no change or an increase in transcript abundance Arabidopsis thaliana
miR156 overexpression plants exhibited increased levels of StCyclin D3.1 transcript Solanum tuberosum
(AtSIP1, RS1, SIP1, AT1G55740) was up-regulated in respective dominant mutants Zea mays
plant viral vectors have been widely used for transient gene expression
OsCKX4 promoter:GUS transgenic plants show GUS activity in primary roots, lateral roots, and crown roots Oryza sativa
ABA2-sGFP expression was much weaker than sGFP only expression Arabidopsis thaliana
SlNAP1 expression is unaltered in SlNAP2 knockdown lines Solanum lycopersicum
expression of MSP1 shows no significant changes in osers1 mutant compared with wild type Oryza sativa
other aaRS genes shows no obvious change in osers1 mutant Oryza sativa
TaALMT1-GFP insert is verified in roots and leaves Secale cereale; Brachypodium distachyon; Arabidopsis thaliana; Nicotiana benthamiana
reverse genetics approach was used to determine the in vivo role of HLP in chloroplast nucleoid organization, genome maintenance and gene expression Chlamydomonas reinhardtii
single ftsZ mutants relative expression levels of wild-type set to 100% Physcomitrella patens
ftsZ1-2 transcript levels are much higher compared to (ATFTSZ1-1, CPFTSZ, FtsZ1, FTSZ1-1, AT5G55280) transcript levels Physcomitrella patens
HvCSLC4 shows higher transcript levels than HvCSLC2 Hordeum vulgare
HvCSLC1 shows correlation with HvCSLC3 Hordeum vulgare
PHT4.5 is specifically expressed in phloem tissue of leaves Arabidopsis thaliana
(AtVGT1, VGT1, AT3G03090) expression is elevated in seeds Arabidopsis thaliana
SCL6-II is expressed ubiquitously in plant tissues
P35S:myc:PDX1.1 overexpression line shows robustly increased expression levels of total (ATPDX1.1, PDX1.1, AT2G38230) Arabidopsis thaliana
P35S:myc:PDX1.3 normal plants could not detect increased levels for total (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) expression Arabidopsis thaliana
maize Ubiquitin promoter (Ubi) drives expression of rice codon optimized Cas9 Oryza sativa
TERMINAL FLOWER 1 (TFL-1, TFL1, AT5G03840) is expressed at chalazal endosperm Arabidopsis thaliana
(ATFKBP12, FKBP12, FKP12, AT5G64350) overexpression had no effect on accumulation of CONSTANS (CO) mRNA Arabidopsis thaliana
(ATWRKY53, WRKY53, AT4G23810) (ATWRKY54, WRKY54, AT2G40750) and (ATWRKY70, WRKY70, AT3G56400) were upregulated in Chlorella fusca (C. fusca)-treated Arabidopsis leaves Arabidopsis thaliana
four loci were significantly lower expressed in pp7l-1 main-2 double mutant compared with pp7l-1 Arabidopsis thaliana
HvXET3 transcripts occurred in root tips Hordeum vulgare
CUR1 is expressed in shoot apices at middle vegetative phase Oryza sativa
(ASK1, ATSKP1, SKP1, SKP1A, UIP1, AT1G75950) 3, 5, 7, 16, 17, and 19 showed reduced or similar expression in (ASK1, ATSKP1, SKP1, SKP1A, UIP1, AT1G75950) compared to and WT plants Arabidopsis thaliana
protein output depends on efficiency of 5′-UTR recruiting ribosomes for translation initiation
(BAM9, BMY3, AT5G18670) has large peak of expression at the night-to-day transition Arabidopsis thaliana
individual members of RbcS gene family show different expression patterns in leaf development and tissue specificity
miR172-resistant (AP2, AtAP2, FL1, FLO2, AT4G36920) overexpression causes overaccumulation of (AP2, AtAP2, FL1, FLO2, AT4G36920) mRNA and protein
LesaPME51490 transcript showed predominant expression in CAP Lepidium sativum
up-regulated (ATNACK2, NACK2, TES, AT3G43210) in (AtSAMS3, MAT4, MTO3, SAMS3, AT3G17390) were also up-regulated in (ATDDM1, CHA1, CHR01, CHR1, DDM1, SOM1, SOM4, AT5G66750) and (ATDFB, DFB, FPGS1, AT5G05980) with reduced DNA methylation and H3K9me2 Arabidopsis thaliana
reduced DNA methylation in (AtSAMS3, MAT4, MTO3, SAMS3, AT3G17390) was closely associated with increased TE expression Arabidopsis thaliana
large deletion of γa coding sequence (1,947 bp) in γ2 is predicted to allow stable expression of genes of about 2 kb Triticum aestivum
nonacclimated reil1-1 reil2-1 mutant differentially expressed 428 genes compared with nonacclimated Col-0 Arabidopsis thaliana
Ory s 23 shows fold up-regulation of transcript abundance Oryza sativa
seed-specific genes are increased in (AGD1, VAL1, AT5G61980) (HSI2-L1, HSL1, VAL2, AT4G32010) seedlings
FLAG-tagged HLP gene inserted into Chlamydomonas expression cassette Chlamydomonas
(EIF4E1B, AT1G29550) gene is expressed at low levels in most tissues Arabidopsis thaliana
promoter of ShMKS1 is highly active in type VI trichomes of cultivated tomato Solanum lycopersicum
lg3 expression is almost entirely restricted to sheath Zea mays
AtLPLA expression is approximately uniform across different organs of mature plants Arabidopsis thaliana
OsLPLA expression is higher in leaves and seeds Oryza sativa
OsCKX4 is expressed relatively lowly in shoot base region where crown root primordia form Oryza sativa
OsRR2 was down-regulated in ren1-D mutants Oryza sativa
rice ACTIN2 (ACT2, DER1, ENL2, FIZ2, LSR2, AT3G18780) transcript is detected across cell types Oryza sativa
endosperm-specific promoter GT1 used in TRS transgenic plants plays a weak role in the inner region but a strong role in the outer region of rice endosperm
GFP protein levels in complemented ProMAT1::MAT4-GFP lines were higher than in noncomplemented lines Arabidopsis thaliana
(FTIP1, MCTP1, AT5G06850) (MCTP2, AT5G48060) (FTIP3, MCTP3, AT3G57880) (MCTP6, AT1G22610) (MCTP15, QKY, AT1G74720) and (MCTP16, AT5G17980) lines all exhibit GUS activity in vascular tissues of vegetative seedlings Arabidopsis thaliana
Thioredoxins (Trxs) modulate activity of transcription factors
RBM-25 gene mutation triggered transcriptomic differences between roa1 mutants and wild-type Arabidopsis thaliana
(NIP7;1, NLM6, NLM8, AT3G06100) is expressed preferentially in flower tissues Arabidopsis thaliana
LOC_Os09g24020, LOC_Os09g24100, and LOC_Os09g24130 are annotated as expressed product Oryza sativa
(PAT24, TIP1, AT5G20350) ;1 transcript level was not affected in LeHT1-silenced R plants [R(i): TRV-LeHT1] Solanum lycopersicum
OsPP18 transcription is significantly impaired in ospp18 mutant Oryza sativa
(ACC2, AT1G36180) transcripts in wild-type seedlings are less abundant than (115D-4A, ACC1, AT-ACC1, EMB22, GK, GSD1, PAS3, SFR3, AT1G36160) transcripts Arabidopsis thaliana
transgenic tomato plants with ShMKS2::GFP construct had strong GFP signal observed in type VI trichomes as well as some weak GFP signals in other types of trichomes Solanum lycopersicum
LG3 was up-regulated in respective dominant mutants Zea mays
SGL1 expression is rapidly decreased in expanding leaves Medicago truncatula
LesaPME14310 transcript was expressed in both seed compartments Lepidium sativum
iLOV (336 bp) and GFP (720 bp) cDNAs are inserted into γ genome vector or γ2 genome vector Triticum aestivum
clustering of lincRNAs based on their expression across tissues showed that genes that have peak expression in a given tissue are likely to have overall similar expression profiles Glycine max
(MUCI70, AT1G28240) and (GAUT11, AT1G18580) have transcriptional profiles in developing seeds and embryos Arabidopsis thaliana
Ory s 2 transcripts show high up-regulation in pollen Oryza sativa
(ROXY1, AT3G02000) transcripts are absent in roxy1-2 mutant Arabidopsis thaliana
FtsZ protein amounts correlate to transcript levels Physcomitrella patens
(ATWRKY45, WRKY45, AT3G01970) overexpression line (35S: ) has no obvious differences in PHT1;4 expression Arabidopsis thaliana
background modifier that regulates limited shoot phenotype in W23 does not significantly affect (AtSIP1, RS1, SIP1, AT1G55740) or lg3 mRNA levels Zea mays
changes in the level of pyruvate orthophosphate dikinase (PPDK, AT4G15530) transcripts and protein were much smaller reduction in pyruvate orthophosphate dikinase (PPDK, AT4G15530) activity Kalanchoë fedtschenkoi
TRV-STTM165/166 plants had much higher mRNA level of TC21810 Nicotiana benthamiana
PME and PMEI cumulative transcript accumulation appears phasic in CAP and RAD Lepidium sativum
(ATNCED6, NCED6, AT3G24220) was expressed at a higher level in cer9-2 mutant Arabidopsis thaliana
AtLPLA expression profile differs slightly from OsLPLA expression profile Arabidopsis thaliana; Oryza sativa
KinG:H2B-YFP was expressed throughout root meristem including stele, endodermis, and quiescent center Arabidopsis thaliana