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cell wall biosynthesis

19446 relationships annotated with this phrase. Showing first 500 of 19446.
Source entity Relationship Target entity Species
opm1 opm2 mutant exhibit reduced homogalacturonan accumulation Hordeum vulgare
two distinct cell types in barley nucellus differ in terms of cell wall homogalacturonan accumulation Hordeum vulgare
Fks1 is important for fungal cell wall formation
(AtGH9C2, GH9C2, AT1G64390) is downregulated in scl28-3 mutant Arabidopsis thaliana
(AtGH9C2, GH9C2, AT1G64390) is induced rapidly in response to (At-SCL28, SCL28, AT5G18810) Arabidopsis thaliana
CNAG_05312 was identified in PKA1 protein-induced screening Cryptococcus neoformans
mutation of a gene encoding trehalose-6-phosphate synthases causes cell shape deformities
chitin synthesis family proteins ( (CHS1, AT1G17610) to CHS7) function in fungal growth Magnaporthe oryzae
(CHS4, LSD1, AT4G20380) is membrane protein important in fungal cell wall integrity Magnaporthe oryzae
Δ (ATBARD1, BARD1, ROW1, AT1G04020) Δ row2 double mutant showed extra effect on CFW staining and cell wall thickness Ustilago maydis
plant cell wall contains glycoproteins
EXT37 is induced rapidly in response to (At-SCL28, SCL28, AT5G18810) Arabidopsis thaliana
Chitin synthases (Chs1–7) play important roles in cell wall chitin synthesis Magnaporthe oryzae
(IRX9, AT2G37090) and (IRX14, AT4G36890) homologs show considerable diversity between (ATGUT1, GUT2, IRX10, AT1G27440) homologs Arabidopsis thaliana; Populus trichocarpa; Oryza sativa; Brachypodium distachyon; Physcomitrella patens; Selaginella moellendorffii; Triticum aestivum
Δ row2 mutant displayed defects in cell wall composition Ustilago maydis
TaGT47_2 is (ATGUT1, GUT2, IRX10, AT1G27440) homolog Triticum aestivum
peroxidases are involved in lignin and suberin formation
grasses synthesize cell wall that differs notably from that of nongrasses
Skewed 5 (SKU5, AT4G12420) is multi-copper oxidase Arabidopsis thaliana
(ANAC092, ATNAC2, ATNAC6, NAC2, NAC6, ORE1, AT5G39610) plays a role in modification of the cell wall Arabidopsis thaliana
callose synthesis is subject to the participation of actin cytoskeleton Arabidopsis thaliana
EXT37 is downregulated in scl28-3 mutant Arabidopsis thaliana
specific (PMES, AT4G10050) are responsible for stem strength
chitin synthesis family proteins ( (CHS1, AT1G17610) to CHS7) function in conidiation Magnaporthe oryzae
xyloglucans (XyGs) is predominant class of hemicellulosic polysaccharides in primary cell walls
GO term 'cell wall organization or biogenesis' is enriched in upregulated DEGs at 24 and 48 h Schrenkiella parvula
Man-1-P guanyltransferase is predicted to contribute to cell wall structure Zea mays
relationship between reduced tricarboxylic acid cycle activity and secondary cell wall synthesis inhibition in aerial parts of Arabidopsis remains largely uncharacterized Arabidopsis thaliana
translational activities involve factors involved in wall biogenesis Arabidopsis thaliana
overexpression of PdGATL1.2 can compensate most of cell wall defects caused by (ATGATL1, GATL1, GLZ1, PARVUS, AT1G19300) mutation Arabidopsis thaliana
cell wall polysaccharide synthases produce products that are deposited irreversibly
cell walls are composed of hemicelluloses
chitin and different types of glucans are essential to cell wall components in pathogenic fungi
peroxidases are involved in cross-linking of cell wall components
N-glycosylation is required for cellulose biosynthesis
(ATBARD1, BARD1, ROW1, AT1G04020) and Row2 have common functions in fungal cell wall remodelling Ustilago maydis
(APY1, ATAPY1, AT3G04080) (apyrase 1) and (APY2, ATAPY2, AT5G18280) (apyrase 2) in Golgi could regulate growth by controlling wall polysaccharide synthesis Arabidopsis thaliana
(ATGUT1, GUT2, IRX10, AT1G27440) clade is represented in phylogenetic trees Arabidopsis thaliana; Populus trichocarpa; Oryza sativa; Brachypodium distachyon; Physcomitrella patens; Selaginella moellendorffii; Triticum aestivum
mutants of the cellulose synthase-like genes (ATCSLD3, CSLD3, KJK, RHD7, AT3G03050) show altered cell wall thickness, causing root hair rupture and cytoplasm leaks Arabidopsis thaliana
plants expressing ovule-specific pectin methylesterase inhibitor exhibit reduced homogalacturonan accumulation Hordeum vulgare
plant-type cell wall organization or biogenesis is enriched in downregulated genes in (CYP75B1, D501, TT7, AT5G07990) Arabidopsis thaliana
cellulose is essential component of plant cell walls
Fks1 is membrane protein important in fungal cell wall integrity Magnaporthe oryzae
rhamnose is also found in other seagrasses, such as Acrostichumm antarctica and Zostera marina Acrostichumm antarctica; Zostera marina
down-regulated genes are overrepresented in cell wall precursor synthesis pathway Rorippa amphibia; Rorippa sylvestris
xyloglucans (XyGs) are not essential for cell wall strength and plant growth
Hemicellulose content in zmbell10-1 is slightly but not significantly lower compared to WT Zea mays L.
Δ row2 mutant displayed defects in cell wall structure Ustilago maydis
plant hydroxyproline-rich glycoproteins (HRGPs) are major structural proteins in cell walls
cell wall polysaccharide synthesis pathway is not upregulated upon AMF inoculation in wild rice Oryza rufipogon
low oxygen levels causes repression of genes involved in energy-consuming processes such as cell wall biosynthesis Arabidopsis thaliana; Oryza sativa; Populus spp.
cell wall-related genes in (ANAC092, ATNAC2, ATNAC6, NAC2, NAC6, ORE1, AT5G39610) / mutant were highly enriched and up-regulated in (ANAC092, ATNAC2, ATNAC6, NAC2, NAC6, ORE1, AT5G39610) / mutant Arabidopsis thaliana
Arabidopsis thaliana seed coat mucilage is powerful model for studying cell wall biosynthesis and polysaccharide interactions Arabidopsis thaliana
abscisic acid (ABA) inhibits expression of genes encoding enzymes of cell-wall biosynthesis Medicago truncatula
hdg2-2 mutant shows trichome cell wall abnormalities Arabidopsis thaliana
inflorescence, silique, leaf, and stems were used for chemical and biochemical studies of the GAUT mutants Arabidopsis thaliana
GH16 glucanase is involved in cell wall modification Ustilago maydis
extensin-like proteins are downregulated in (ATNRAMP3, NRAMP3, AT2G23150) (ATNRAMP4, NRAMP4, AT5G67330) mutant Arabidopsis thaliana
cell wall biosynthesis requires coordinated action of a large number of enzymes
families investigated in the present study were investigated for xyloglucan structure
SMR1-mediated endoreplication might exert effect through transcriptional control of cell wall genes Arabidopsis thaliana
Proanthocyanidins (PAs) bind to cell walls
Differentially expressed genes in zmbell10-1 include genes corresponding to cell wall biogenesis Zea mays L.
WT filaments accumulated chitin at growing hyphal tip Ustilago maydis
yeast cell wall contains branched (1,3;1,6)-β-glucans Saccharomyces cerevisiae
tip-localized RMD determines deposition of pectin at tube wall Oryza sativa
40 cell wall-related genes displayed 5-fold difference in expression Zea mays
primary cell wall is composed of protein
Arabidopsis seed coat epidermal (SCE) cells produce minor amounts of cellulose Arabidopsis thaliana
genes and enzymes responsible for synthesizing cell wall polysaccharides are a major activity in plant research
results confirm wall phenotypes of (GAUT12, IRX8, LGT6, AT5G54690) mutants Arabidopsis thaliana
mur9-1 mutant shows decreased Fuc Arabidopsis thaliana
(1,3;1,4)-β-glucan may be involved in organization of cellulose microfibrils, effectively binding cellulose fibers together and assisting in formation of longer microfibril structures
plant cell walls are largely composed of pectin
coexpression analysis has been a successful approach to identify GTs involved in cellulose and hemicellulose biosynthesis
HG biosynthesis and methyl-esterification take place in Golgi apparatus
(XET, XTH33, AT1G10550) endotransglucosylates xyloglucan to fix cellulose microfibrils Populus trichocarpa
(GAUT12, IRX8, LGT6, AT5G54690) mutant exhibits significantly and reproducibly different cell wall glycosyl residue composition Arabidopsis thaliana
mutants in the two B clades show marked reductions in wall GalA content
gaut mutants show altered galacturonic acid composition Arabidopsis thaliana
plant cell walls contain polysaccharides
rhamnogalacturonan-II (RG-II) contains apiosyl (Api) residues
homogalacturonan (HG) synthesis occurs in endomembrane system
(FLA7, AT2G04780) likely plays role in cell wall function, biosynthesis or structure Arabidopsis thaliana
arabinogalactan protein plays a role in cell wall structure
(ATGSL05, ATGSL5, EED3, GSL05, GSL5, PMR4, AT4G03550) is essential for callose production in trichome Arabidopsis thaliana
xyloglucan-specific galacturonosyltransferase (RHS8, XUT1, AT1G63450) shows highly increased abundance in otu5 relative to wild type by 2.6-fold up-regulation Arabidopsis thaliana
xyloglucan labeling is observed in primary wall Populus trichocarpa
irx8-1 / gaut12-1 mutant plants have reduced Xyl content
down-regulated genes GO terms involved in cell wall organization, root morphogenesis, and differentiation of trichomes and epidermal cells Solanum lycopersicum
genes encoding all the enzymes required to produce cell wall monosaccharides were detected and expressed at level above normalized mean of 1000 Arabidopsis thaliana
manipulation of genes expressed in trichomes should aid in understanding how plant cell walls develop Arabidopsis thaliana
genes involved in cell wall biosynthesis and modification were decreased in mature (MEX1, RCP1, AT5G17520) leaves
(XET, XTH33, AT1G10550) signal is absent from S2 layer Populus trichocarpa
PdGATL1.1 and PdGATL1.2 do not play identical roles in cell wall biosynthesis in poplar Populus trichocarpa
cell walls are composed of proteins
other proteins identified in Y2H screening could play a role in cell wall formation Oryza sativa
borate cross-linking occurs in rhamnogalacturonan II (RG-II) pectin cell wall
plant cell wall contains cellulose microfibrils
ferulic acid (FA) is attached to lignin via ether bonds with its hydroxyl group covalently linked to lignin monomers
sterol synthesis inhibitors and mutations in sterol biosynthesis genes do not alter pectins and hemicelluloses
collection of gene-edited alleles for HvCslF / H represents valuable genetic resource for studying barley cell walls Hordeum vulgare
primary cell wall contains pectins
glycosyltransferase encoded by Zm00001d002064 is likely involved in cell wall biogenesis and organization Zea mays
flux through myoinositol oxidation pathway is differentially regulated in climacteric and nonclimacteric fruits Solanum lycopersicum; Prunus persica; Capsicum annuum; Fragaria x ananassa
yeast cell wall is primarily composed of (1,3)-β-glucans Saccharomyces cerevisiae
microtubule coalignment relates to cellulose deposition
exo70H4-1 silica phenotype is contingent on absence of callose synthesis Arabidopsis thaliana
young, elongating vegetative tissues accumulate large amounts of mixed-linkage glucan (MLG) Brachypodium distachyon
plant cell wall is composed of highly hydrated polysaccharide matrix
(GAUT12, IRX8, LGT6, AT5G54690) is also known as (GAUT12, IRX8, LGT6, AT5G54690) Arabidopsis thaliana
(GAUT6, AT1G06780) mutant has reduced wall GalA
UDP-glucuronate 4-epimerase6 is predicted to contribute to cell wall structure Zea mays
(GAUT8, QUA1, AT3G25140) mutant exhibits significantly and reproducibly different cell wall glycosyl residue composition Arabidopsis thaliana
decrease in methyl ester reduction is in agreement with hypothesis of increase in RG-II found on HG Arabidopsis thaliana
mur9-1 mutant shows decreased Xyl Arabidopsis thaliana
(GAUT11, AT1G18580) and (MUCI70, AT1G28240) had contrasting effects on xylan abundance Arabidopsis thaliana
muci70-1 irx14-1 double mutant showed more severe reductions than expected in xylan- and pectin-related sugars in total mucilage extracts Arabidopsis thaliana
(GAUT12, IRX8, LGT6, AT5G54690) mutants show reduction in GalA to 82% that of WT in inflorescence
homogalacturonan (HG) is secreted in highly methylesterified form into plant cell wall of growing cells
balance between AI cell growth and progression toward aposporous female gametophyte formation needs to be linked to secretion of new cell wall components Hieracium spp.
pectin is defined by high content of GalA residues connected by α-1,4 linkages
minor sugars are derived primarily from hemicelluloses Arabidopsis thaliana
XXXG incorporation occurs in primary wall Populus trichocarpa
microsomal membrane protein preparations from qua1-1 stems had reduced GalAT and xylan synthase activity
synthesis and modifications of different polymers are maintained in coordinated fashion
SP-citrine-COBL10ƊC9 may impair biochemical function in cell wall formation Arabidopsis thaliana
prevalence of nucleotide-sugar biosynthesis enzyme transcripts ensures availability of precursors for production of new cell wall polymers Hieracium praealtum
(ATRAPTOR1B, RAPTOR1, RAPTOR1B, AT3G08850) lines do not show significant changes in monosaccharides or crystalline cellulose Arabidopsis thaliana
(ATGSL05, ATGSL5, EED3, GSL05, GSL5, PMR4, AT4G03550) trichomes lack visible callose Arabidopsis thaliana
coexpression- and sequence-based MUCILAGE-RELATED (MUCI) reverse genetic screen identified three GTs required for synthesis of xylan and galactoglucomannan Arabidopsis thaliana
homogalacturonan biosynthesis is key determinant of plant development
barley roots contain XyG Hordeum vulgare
Arabidopsis seed coat epidermal (SCE) cells produce minor amounts of arabinogalactans Arabidopsis thaliana
growth defects in plants overexpressing cellulose synthase-like F6 (CSLF6) may be due to excessive amounts of Mixed-linkage (1,3;1,4)-β-D-glucan (MLG) produced
whole xyloglucan and XXXG incorporation is incorporated into same narrow region on opposite side Populus trichocarpa
GT43 family is represented in phylogenetic trees Arabidopsis thaliana; Populus trichocarpa; Oryza sativa; Brachypodium distachyon; Physcomitrella patens; Selaginella moellendorffii; Triticum aestivum
plant cell wall contains pectin
(RHS8, XUT1, AT1G63450) mutants produce xyloglucan that lacks GalUA Arabidopsis thaliana
secretory vesicles contain mostly pectin, especially homogalacturonans
boron (B) has role in cell wall structure and function
yeast cell wall contains mannans Saccharomyces cerevisiae
(BOR2, AT3G62270) is important for cross-linking pectins under low-Boron (B) conditions Arabidopsis thaliana
GH16 family includes endotransglucosylases
hydroxyproline-rich glycoprotein family genes were remarkably up-regulated only in Rc-grown seedlings Arabidopsis thaliana
biochemical evidence of enzymatic activity has not been obtained to confirm hypotheses about (GAUT12, IRX8, LGT6, AT5G54690) and (ATGATL1, GATL1, GLZ1, PARVUS, AT1G19300) function Arabidopsis thaliana
Poaceae xyloglucans lacks fucosylated units
boron (B) maintains structure of cell wall by cross-linking pectic polysaccharides through borate-diol bonding cell wall structure
UBQ::GFP:CALS9 produces similar results to UBQ::GFP:PMR4 Arabidopsis thaliana
boron plays structural role in rhamnogalacturonan II component of the pectic cell wall
plant cell walls consist of polysaccharides
(GAUT11, AT1G18580) has a role in wall modification or biosynthesis
BR-activated transcription factor (BES1, BZR2, AT1G19350) enhances expression of cellulose synthase genes Arabidopsis thaliana
(COBL10, AT3G20580) localized in cytoplasm of (APTG1, AT5G14850) pollen tubes may still function in cell wall construction Arabidopsis thaliana
(CER9, SUD1, AT4G34100) deficiency down-regulated expression of genes associated with plant cell wall structure Arabidopsis thaliana
parenchyma cells accumulate large amounts of mixed-linkage glucan (MLG) Brachypodium distachyon
cell wall rigidity is strongly influenced by polysaccharide structure and composition
demethylesterified homogalacturonan (HG) interacts with Ca2+
extra effect on CFW staining and cell wall thickness supports redundant roles of (ATBARD1, BARD1, ROW1, AT1G04020) and Row2 Ustilago maydis
cslf6-2/+ heterozygous grain (1,3;1,4)-β-glucan labelling was across aleurone and endosperm cell walls Hordeum vulgare
cell wall of (AXS1, AT2G27860) (AXS2, AT1G08200) /+ mutant plants contains less RG-II-borate complex Arabidopsis thaliana
primary cell wall contains protein
downregulated genes encode extracellular or cell wall proteins Arabidopsis thaliana
growth defects in plants overexpressing cellulose synthase-like F6 (CSLF6) may be due to lack of additional enzymes required to integrate Mixed-linkage (1,3;1,4)-β-D-glucan (MLG) into the cell wall
(NIP7;1, NLM6, NLM8, AT3G06100) has a role in cell wall biosynthesis during microsporogenesis Arabidopsis thaliana
microtubules pattern cell wall material deposition
(MUCI70, AT1G28240) was not known to affect cell wall structure Arabidopsis thaliana
primary cell wall is composed of hemicelluloses
xyloglucans are found in primary walls of monocotyledons
Commelinid monocotyledons exhibit variation in xyloglucan structure
(IRX14, AT4G36890) irx14L(±) double mutant shows total reduction in xylose of 42% reduction from wild-type
increased arabinose and uronic acids suggests higher levels of pectins and/or arabinogalactan proteins
growing cells continuously manufacture cell wall material
tissue distortion is sign of reduced cell wall strength Populus tremuloides
boron function has only been demonstrated mechanistically in RG-II-borate complexes in primary cell walls
discrepancy of cell wall properties conferred by various mutants explains differential cracking phenotypes among pectin mutants
(GAUT13, AT3G01040) mutant have increased GalA and Gal content
COBRA-related genes are associated with three of the four CESA node regulons Arabidopsis thaliana
cslf6-2/+ heterozygous mutants DP3:DP4 ratio is not significantly different from wild-type controls Hordeum vulgare
cslf9 mutant grain at 15 (DPA, AT5G02470) exhibited similar (1,3;1,4)-β-glucan labelling pattern Hordeum vulgare
(1,3;1,4)-β-glucan has integral role in primary cell wall of barley Hordeum vulgare
selective vesicle shuttling may sustain coordination of polymer synthesis
cell walls are composed of cellulose microfibrils
habituated bean cells have decreased cellulose content in cell walls Phaseolus vulgaris
(TOR, AT1G50030) pathway affects cell wall structure and properties Arabidopsis thaliana
genes showing similar transcriptional response in both A9:u-ATP9 and AP3:u-ATP9 transgenic lines include 29 genes involved in cell wall metabolism Arabidopsis thaliana
repressing both (ATCAD4, CAD, CAD-C, CAD4, AT3G19450) and CCR activities specifically involved in lignification has severe consequences on cell wall composition of stems Arabidopsis thaliana
orientation of cellulose microfibril deposition is guided by cortical microtubules (MTs)
glycophosphatidylinositol-anchored membrane protein encoded by Os07g0102300 regulates leaf rolling by affecting maintenance of cell wall formation Oryza sativa
cslf9 mutant grain at 15 (DPA, AT5G02470) compared with wild-type grain Hordeum vulgare
pectins are required to build up cell wall architecture
bundle sheath wall thickening has different candidate genes implicated in cellulose, lignin, MtN transporters, wall associated kinases, and suberin biosynthesis
PME maturation could be coordinated with HG biosynthesis and methyl-esterification
(GAUT13, AT3G01040) mutant exhibits significantly and reproducibly different cell wall glycosyl residue composition Arabidopsis thaliana
reduced substrate supply for cell wall biosynthesis probably causes cell collapse Arabidopsis thaliana
KOJAK has been suggested to function in synthesis of non-cellulosic cell-wall polysaccharides
HvCESA6 is co-expressed with HvCslF6 Hordeum vulgare
alteration of (ATCAD4, CAD, CAD-C, CAD4, AT3G19450) and CCR genes has severe consequences on cell wall composition of stems Arabidopsis thaliana
genes mutated in irx lines are involved in biosynthesis of cellulose, lignins, or xylans Arabidopsis thaliana
ferulic acid (FA) is attached to cell wall polymers by ester bonds through its carboxylic acid group with the C5-hydroxyl of α-L-arabinosyl side chains of xylans
feruloyl groups are attached to cell wall polysaccharides
(AXS1, AT2G27860) and (AXS2, AT1G08200) genes regulate RG-II-borate complex content
auxin is able to restore cell wall synthesis to normal levels following down-regulation
fluorescent XXXG is incorporated into cell wall surface Nicotiana tabacum
L-[3H]-fucose was fed to suspension-cultured cells of tall fescue (Festuca arundinacea) Festuca arundinacea
ccc mutant contains higher levels of uronic acids
glycosylation reactions of low-molecular-weight substances play important roles in cell wall synthesis
cortical MTs are critical for orientation of cellulose microfibrils Arabidopsis thaliana
disruption of two xylosyltransferases has led to plants with no detectable xyloglucan
cutin is cell wall localized heterogeneous polyester
cslf6-2 homozygous grain had (1,3;1,4)-β-glucan labelling completely absent in endosperm Hordeum vulgare
information transduction across the plasma membrane occurs from microtubules
deposition of cellulose microfibrils is guided by orientation of cortical microtubules
cell wall biosynthesis genes shifted from root expression in C3 plants to leaf expression in C4 plants Cleomaceae
cellulose synthase expressed in sink-source transition stage may relate to secondary wall thickening in bundle sheath Zea mays
cell wall appositions (CWA) are composed of callose Hordeum vulgare
altered (ABCG11, AtABCG11, ATWBC11, COF1, DSO, WBC11, AT1G17840) (ABCG1, WBC1, AT2G39350) expression largely affects genes associated with cell wall processes
HvXET3 and HvXET4 link covalently xyloglucan and anionic oligosaccharides derived from pectin Hordeum vulgare
cslf9 homozygous mutants showed no significant difference in (1,3;1,4)-β-glucan content Hordeum vulgare
cslf9 mutant grain was accompanied by reduction in calcofluor staining intensity Hordeum vulgare
cslf9 alleles had cellulose reduction of 24.11 ± 1.56% Hordeum vulgare
absence of expression of two lignin-specific genes induces noticeable changes in the composition of cell wall polysaccharides
cslf6-2 homozygous mutant grain almost completely lacks (1,3;1,4)-β-glucan Hordeum vulgare
peroxidases can polymerize cell wall compounds
Zantedeschia aethiopica has xyloglucan structure Zantedeschia aethiopica
CesA family genes co-expressed with COBRA-related genes Arabidopsis thaliana
lack of INCW2 localization leads to aberrant or stunted WIGs in mn1 mutant Zea mays
(IRX14, AT4G36890) mutant exhibits reduction in xylose of 24% reduction from wild-type
transgenic secondary xylem cells have only localized lines or spots of birefringence Populus tremuloides
HvXET3 catalyzes hetero-transglycosylation Hordeum vulgare
EXPANSIN (EXP), EXTENSIN (EXGT-A1, EXT, XTH4, AT2G06850) XYLOGLUCAN ENDOTRANSGLUCOSYLASE HYDROLASE (XTH), ROOT-HAIR SPECIFIC (RHS), and CELLULOSE SYNTHASE LIKE (CSL) are involved in modifying cell wall properties Arabidopsis thaliana
cslf9-2 and cslf9-3 mutant grain glucose reduction was not detected in cslf9-1 mutant grain Hordeum vulgare
ferulic acid is associated with pectic polysaccharides
changes in metabolic networks modify cell wall metabolism Zea mays
wild-type grain showed darker blue colour in central grain area Hordeum vulgare
glucose, xylose, arabinose and galactose represent building blocks of starch, (1,3;1,4)-β-glucan and arabinoxylan Hordeum vulgare
xyloglucan signal is detected in inner surface of S2 layer Populus trichocarpa
gaut mutants show altered galactose composition Arabidopsis thaliana
(GAUT12, IRX8, LGT6, AT5G54690) mutant has been studied phenotype Arabidopsis thaliana
(ATGATL1, GATL1, GLZ1, PARVUS, AT1G19300) mutant has been studied phenotype Arabidopsis thaliana
cell walls of irx8-1 and irx8-5 mutants have reduced β-(1,4)-linked xylose and α-(1,4)-linked GalA residues Arabidopsis thaliana
(ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutant shows up-regulated hydroxyproline-rich glycoproteins (HPRG)
(ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutant shows up-regulated proline-rich glycoproteins (PRG)
reactions for galacturonic acid, xylose and GDP-glucose synthesis had larger fluxes than reference flux distributions in gMix and gGly Jatropha curcas
genes conferring lower glycemic index (GI) include genes that regulate dietary fiber
polysaccharides are assembled into larger structures after being delivered to cell surface
arrested (ATTPS1, TPS1, AT1G78580) mutant embryos show thickened cell walls Arabidopsis thaliana
cell wall localized heterogeneous polyesters are widespread in land plants
cslf6-2/+ heterozygous mutant grain had intermediate levels of (1,3;1,4)-β-glucan Hordeum vulgare
cell wall RG-II content might affect deposition of other pectic components, such as RG-I
carbohydrates and lignin create lignocellulose
LOC_Os07g41320 involved in cellulose synthesis Oryza sativa
pectin and soluble polysaccharide content was significantly higher in Arabidopsis wild-type and GhnsLTPsA10-silenced cotton plants Arabidopsis thaliana; Gossypium hirsutum
β-glucans are integral components of microbial and plant cell walls
plant cell wall contains structural proteins
small amounts of fucose were detected in xyloglucans produced by suspension-cultured rice (Oryza sativa) cells Oryza sativa
ccr1g mutant contains enhanced xylan polysaccharides
wild-type TmXET6.3 lacks hetero-transglycosylation activity with xyloglucan/[α(1-4)GalAp]5 substrate pair Tropaeolum majus
cslf6-2 homozygous grain showed weak fluorescence in cell walls of sub-aleurone and outer endosperm cells Hordeum vulgare
reaction for galactose synthesis was identified in gGly Jatropha curcas
Mutation of CslF results in altered cell wall stiffness
lignin cross-linking is means to cell wall enforcement
genetic alteration of head sugar domain causes changes in cell wall (CW) composition
microfibrils biosynthesis advances force re-examination of assumptions about assembly and functions of cell wall components
spatial distortion of transgenic stem tissue could contribute to less birefringence Populus tremuloides
cslf9 mutants showed changes in the abundance of other cell-wall-related monosaccharides Hordeum vulgare L
cslf6-2 homozygous mutant grain had (1,3;1,4)-β-glucan content of 0.11% w/w ± 0.04 Hordeum vulgare
cell wall synthesis and modification are expected to be especially sensitive to surface to volume (SV) ratio plants
type III wall peroxidases use H2O2 substrates to induce protein cross links and lignin formation in cell walls Arabidopsis thaliana
cross linking is consistent with mechanism for boron cross linking Arabidopsis thaliana
studies on metabolic coordination between cell wall synthesis and primary metabolism have focused on different nucleotide sugars Arabidopsis thaliana
(ATFLA11, FLA11, AT5G03170) (AtFLA12, FLA12, AT5G60490) double mutant has reductions in arabinans, galactans, and rhamnose Arabidopsis thaliana
exo70H4-1 mutant trichomes lack callose Arabidopsis thaliana
Arabidopsis trichomes contain lignin Arabidopsis thaliana
26 gaut mutants demonstrate aberrant wall composition Arabidopsis thaliana
11 SDV transmembrane silicanin-like genes were phasing predominantly at ZT18 Skeletonema robusta
Arabidopsis lines with increased ploidy had primary cell walls of similar thickness but thinner secondary walls Arabidopsis thaliana
(GAUT8, QUA1, AT3G25140) transcript expression is associated with vascular tissues Arabidopsis thaliana
heavily glycosylated proteins is component of the plant cell wall
(COBL6, AT1G09790) may constitute candidate to explore functions of the COBRAs Arabidopsis thaliana
PHT4.6 is most likely involved in cell wall synthesis Arabidopsis thaliana
protein (ROL5, AT2G44270) is suppressor of the LRR-extensin1 (LRX1, AT1G12040) Arabidopsis thaliana
cslf6-2 homozygous mutant grain showed potential difference in polysaccharide distribution Hordeum vulgare
further phenotypic characterisation of additional plant tissues and developmental stages will be required to determine precise contribution of HvCslF3 and HvCslH1 to cell wall composition Hordeum vulgare
(GMD2, MUR1, MUR_1, SFR8, AT3G51160) mutant has not shown evident crack under growth conditions
understanding of regulatory mechanisms may eventually allow custom design of plant cell walls
microtubule patterning is possibly linked to creation of polylamellate cell walls Arabidopsis thaliana
data from the glycome and phenome level was used to establish relationships between polysaccharide (glycan) rich cell walls of cotton fibers and their phenotypic characteristics Gossypium species
(ATRGP2, MUR5, RGP2, AT5G15650) may be more directly involved in callose biosynthesis in cell walls around plasmodesmata Arabidopsis thaliana
whole xyloglucan is incorporated into wall xyloglucan by action of (XET, XTH33, AT1G10550) Nicotiana tabacum
(AtSFR6, GLH2, IEN1, MED16, SFR6, YID1, AT4G04920) affects cellulose Arabidopsis thaliana
cslf6-2 mutant grain had small but significant increase in xylose and arabinose content Hordeum vulgare
(ATCSLD1, CSLD1, AT2G33100) gene encodes Cellulose Synthase-Like D protein Zea mays
peak of cytokinesis at ZT18/ZT22 coincided with expression of rhythmic genes involved in cell wall formation Skeletonema robusta
cellulose structure tailoring can modulate disease resistance
cellulose synthase localization influences cell morphology
pectin polysaccharides have roles in secondary cell walls
altering GmPTF1 expression significantly impacts the transcription of cell wall genes Glycine max
matrix polysaccharides biosynthesis advances force re-examination of assumptions about assembly and functions of cell wall components
pectin acetylesterase is involved in texture (cell wall biosynthesis) Solanum tuberosum
Sotiriou and Spyropoulos (2002) incorporated radioactivity in regenerated cell wall to study galactomannan biosynthesis
Zinnia cell culture system is used to study wall biosynthesis Zinnia elegans
Fasciclin-like arabinogalactan proteins (FLA2, AT4G12730) is cell wall protein Gossypium hirsutum
DCMU treatment prevents cell wall synthesis
pectins are major components of primary cell walls of eudicots
regulated trafficking of membrane proteins is a common regulatory mechanism in the control of cell wall metabolism
impairment of proton pumping activity results in cellulose deficiency
hemicellulose structure tailoring can modulate plant growth
cortical microtubule reorientation reorients direction of cellulose microfibril synthesis in the wall Cardamine hirsuta
ccc mutant contains higher levels of arabinose
cslf9-3 mutant grain had total starch content of 40.24 ± 0.45% w/w Hordeum vulgare
(AXS1, AT2G27860) (AXS2, AT1G08200) /+ mutant plants showed thick cell walls
β-glucans are conserved components of cell walls of both microbes and plants
β-glucans contribute to polysaccharide content of fungal cell walls
Mutation of Dw2 disrupts localization of polysaccharides in cell walls Sorghum bicolor
proteins within the plasma membrane define regulation of cell wall composition
nucleotide-rhamnose synthase (MICRO.444.C1_634) may be implicated in tuber texture differences Solanum tuberosum
Type IV ESTs representative ESTs were similar to S-adenosylmethionine decarboxylase (SMADC), osmotin, and actin Gossypium hirsutum
1-butanol treatment results in round shape without cell wall
t-butanol treatment at 8 h results in thick cell wall
xyloglucan plays an important role in defining structural properties of plant cell walls
callose is required to build up cell wall architecture
glycine-rich proteins are expected to be structural components of the plant cell wall
β-1,3-linked glucans with β-1,6-linked side branches are predominant form of β-glucans in outer cell wall layer
HX is another component of plant cell walls Arabidopsis thaliana
24 diatom-specific SET domain protein methyltransferases (BacSETs) were phasing predominantly at ZT18 Skeletonema robusta
pectic polysaccharides crosslinked with borate is important for physical strength of plant cells
impaired cytoskeleton dynamics alters deposition of cell wall components
knocking out CDAs may impair fungal cell wall integrity and development Puccinia striiformis f. sp. tritici
DDYM (dw2 mutant) exhibits modified accumulation and localization of HX and MLG in cell walls Sorghum bicolor
Carbohydrate-Active enZymes (CAZy) database contains information about enzymes linked to synthesis and modifications of cell wall polysaccharides
plant cell wall contains hemicellulosic polysaccharides
ferulic acid (FA) is linked to O-5 of arabinose chain of arabinoxylan
fluorescent whole xyloglucan is incorporated into all regions of walls Nicotiana tabacum
weak fluorescence in cslf6-2 grain may be partially due to autofluorescence of phenolic acids Hordeum vulgare
subepidermis predominant genes are primarily involved in cell wall biosynthesis and restructuring Citrus clementina
boron (B) deficiency influences cell wall organisation Arabidopsis thaliana
Mutation of Dw2 caused altered accumulation of cell wall polysaccharides Sorghum bicolor
tocopherol-deficient mutants have severely impaired cell wall development of phloem transfer cells
polysaccharide synthesis needs to be carried out in coordinated fashion in plasma membrane and Golgi apparatus
cell wall modifications can include deposition of cutin
cellulosic cell walls is critical for cell shaping and differentiation
developmental polysaccharides is essential to obtain high quality fibers Gossypium species
cellulose is implicated in bundle sheath wall thickening
cell wall changes in polyploid plants relate to changes in cell wall-related gene expression in diploids during endoreplication Arabidopsis thaliana
mixed-linked glucans (MLGs) contribute to cell wall flexibility and growth in grasses
hydroxyproline-rich glycoprotein (HRGP) down-regulated with fold change of −3.7-fold Glycine max
blue light decreases yielding properties of cell walls
reddish-brown vascular tissue in the leaves and stems is a result of changes in cell wall composition Zea mays
cell wall formation takes place in specialized intracellular compartment termed silica deposition vesicle (SDV) Skeletonema robusta
analysis in commercially important cotton lines provides insights into developmental polysaccharides that are essential to obtain high quality fibers Gossypium species
plasma membrane linker protein shifted from root expression in C3 plants to leaf expression in C4 plants Cleomaceae
boron (B) crosslinks rhamnogalaturonan II
complex polysaccharides is component of the plant cell wall
(ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutant shows no up-regulated cell wall biosynthesis genes
thickened cell walls in arrested (ATTPS1, TPS1, AT1G78580) mutant embryos is caused by altered pectin deposition Arabidopsis thaliana
PoGT43B and PoGT8D RNAi lines exhibit altered amount of arabinose Populus alba x tremula
genetic basis of biosynthesis of cell wall polysaccharides is advancing understanding
significant epistatic interactions were identified with cell wall precursor biosynthesis gene (LOC_Os06g44270)
chemical A treatment does not alter distribution of cellulose in cell walls Arabidopsis thaliana
pit membranes are made of cellulose microfibrils
(RGP, RGP3, AT3G08900) (Reversibly Glycosylated Polypeptide) may be involved in biosynthesis of cellulose, hemicellulose and/or starch
secondary metabolites (SMs) have roles in lignification
BRs may affect cell wall polymer formation
myo inositol and its phosphorylated derivatives play important roles in cell wall biosynthesis
(HUP39, PRP, AT3G23170) (proline-rich protein) only expressed at a high level during middle stage of cell wall regeneration Gossypium hirsutum
C3HC4-type zinc finger family protein expressed only during the initiation of cell wall biosynthesis Gossypium hirsutum
hormones have been implicated in the regulation of cell wall biosynthesis or deposition
exocyst is involved in regulation of cell wall biogenesis
terminally differentiating cells elaborate cell wall structures
genes encoding beta-1,3-glucan hydrolases and cell wall precursor biosynthesis gene likely exert an effect on β-glucan and cellulose biosynthesis
functional analysis of transporters will help understand role of transporters in cell wall biosynthesis
high-speed myosin (ATMYA2, MYA2, XI-2, XI-6, AT5G43900) acceleration of cytoplasmic streaming by may contribute positively to transport of cell wall precursors
chemical A treatment reduces pectin content in cell walls Arabidopsis thaliana
C05140C08 is involved in deposition of cuticle precursors of the primary cell wall Poncirus trifoliata
(SGB1, AT1G79820) may transport glucose for cell wall biosynthesis during cell division Arabidopsis thaliana
callose synthesis gene powdery mildew resistant 4 (ATGSL05, ATGSL5, EED3, GSL05, GSL5, PMR4, AT4G03550) is defective in cell wall formation
α-fucosyltransferase activity involved in xyloglucan synthesis
β-glucans are building blocks of cell walls
increased chloroplasts per leaf area may be due to reduced cell size Arabidopsis thaliana
harlequin (ATTOP6B, BIN3, HLQ, HYP6, RHL3, TOP6B, AT3G20780) mutant epidermal cells accumulate callose Arabidopsis thaliana
cluster of genes with same pattern of expression was particularly enriched in genes shown to play major role in cell wall formation in other organisms
genes encoding proteins in cell wall metabolism were under-expressed in (MIR167A, AT3G22886) flower buds Solanum lycopersicum
highly expressed MYB TFs in summer were similar to those related to cell wall biosynthesis, flavonoid biosynthesis, and phenylpropanoid biosynthesis Picea abies
heteroxylans (HXs) and mixed linkage glucans (MLGs) are potentially affected by differences in endomembrane phosphoproteomics and activity Sorghum bicolor
absence of xyloglucans (XGs) alters cellulose biosynthesis
modulation of cell wall contents may affect overall plant biomass
microtubules co-align with cellulose microfibrils
genetically encoded sensors offer opportunities to study cell wall remodelling
(ATCESA8, CESA8, IRX1, LEW2, AT4G18780) .1 homozygous deletion mutant is severely dwarfed, sterile, and possesses dark green leaves Arabidopsis thaliana
C05811H06 is related to pectin component of the cell wall Poncirus trifoliata
Golgi apparatus plays major role in biosynthesis of cell wall material
rice brittle culm1 mutant contains more lignin Oryza sativa
xyloglucan (XyG) contains α-D-xylose substitution on the oxygen-6 position
EXPANSINS and ARABINOGALACTAN PROTEINS provide correlative evidence for functions in (ATTOP6B, BIN3, HLQ, HYP6, RHL3, TOP6B, AT3G20780) cell wall phenotypes Arabidopsis thaliana
~10% of plant genomes are devoted to cell wall biogenesis
arabinoxylan is important component of grass primary and secondary cell walls Triticale
lignins are synthesized to reinforce cell walls
dichlobenil blocks cellulose synthesis Arabidopsis thaliana
187 bona fide APOLO targets show enrichment for categories related to cell wall composition and organization Arabidopsis thaliana
BR-deficient mutants contain less cellulose Arabidopsis thaliana
chemical A (ID 6240780) causes changes in cell wall composition
Altered distribution of MLG and HX could be a consequence of depletion of these polysaccharides in cell walls (25–50%) Sorghum bicolor
plants must have evolved regulatory mechanisms controlling biosynthesis, targeted secretion, and assembly of wall components
plant cell wall polysaccharides are synthesised in Golgi apparatus
BR-perceptional mutants contain less cellulose Arabidopsis thaliana
pectin methylesterase gene has differential expression levels in cell wall biosynthesis Solanum tuberosum
overall amount of cell walls and cell wall lignification increases with increasing MA in Australian species
protein glycosylation is necessary for proper cell wall formation Arabidopsis thaliana
decreased yielding properties of cell walls modifies cell turgor pressure
seedling leaf cell walls in Brachypodium have distinctive proportions of hydroxycinnamic acids constituents Brachypodium distachyon
Group of 25 genes related to cell walls can be divided into two subgroups Gossypium hirsutum
Glycoside hydrolases (GH) play roles in cell wall metabolism
C05133B06 and C19009B12 are related to xyloglucans Poncirus trifoliata
fatty acid ω-oxygenation in plants has mostly been implicated in cell wall polyester formation
cell wall peroxidase catalyzes peroxidative cross-linking of wall proteins and polysaccharides Arabidopsis thaliana
active regeneration of a new cell wall did not result in markedly increased expression of genes involved in cell wall biosynthesis or modification Solanum tuberosum
GoFLA19s encode fasciclin-like arabinogalactan family protein Gossypium spp.
polymers of hydrated silica is important for physical strength of plant cells
cell wall modifications can include deposition of callose
understanding of synthesis of wall polymers and its regulation has enabled strategies to alter qualitative composition of wall materials
MtN transporters are implicated in bundle sheath wall thickening
cortical microtubules act as tracks for polarized deposition of cellulose fibers
chemical A treatment does not significantly alter cellulose content in residual pellet Arabidopsis thaliana
importance of RGPs in cell wall deposition during cell division and growth is consistent with observation of AtRGP2:GFP highly enriched in dividing cells of shoot apical meristem Nicotiana tabacum
H-derived compounds in bm2-bm4 mutant are consistent with increase in p-coumarate reduction
common set of misregulated transcripts in PtMYB14 overexpression included sequences related to cell wall organization and biogenesis
Bc6 culms exhibits 31% decrease in cellulose content based on weight Oryza sativa
Bc6 mutant exhibits essentially same results as comparison with parental line IR68 Oryza sativa
low R/FR ratios increases internode levels of cell wall carbohydrates Helianthus annuus
sucrose synthase (SUS; EC 2.4.1.13) provides UDP-glucose directly to cellulose synthase
lack of storage inclusions in CCRI9106 (ghfla19-1) pollen and protein characteristics of FLA19, which may be responsible for formation of cell wall (CW) Gossypium hirsutum
pollen cell wall must be sufficiently flexible to allow incorporation of wall precursors
8 S-adenosylmethionine decarboxylase-aminopropyltransferase (AMDC-APT) genes were phasing predominantly at ZT18 Skeletonema robusta
brassinosteroids (BR) modulate growth by tuning expression of wall regulators
compensatory mechanism is activated in response to certain changes in lignin composition
brassinosteroids (BRs) regulate cellulose synthesis Arabidopsis thaliana
β-1,3-linked glucan callose plays functionally important role in plant cell walls
increased hemicellulose content is probably compensation reaction of rice with reduced cellulose content Oryza sativa
Thaxtomin A (TXT) inhibits cellulose synthesis
EST encoding an IAA-response protein showed a similar expression pattern as transcription factor NAC Gossypium hirsutum
possible (ATEXLA2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, EXPL2, AT4G38400) and (AT-EXPR, ATEXLB1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, EXPR, AT4G17030) genes might imply possible roles in cell wall construction and modification
sucrose synthase controls production of UDP-glucose
isoxaben specifically inhibits cell wall synthesis
plant microtubule cytoskeleton coordinates deposition of cellulose microfibrils in the cell wall plants
protein encoded by clone PP_LEa0033B07f has some features generally found in cell wall proteins Prunus persica
Type II ESTs included (HUP39, PRP, AT3G23170) GRP, (anac016, NAC016, AT1G34180) (ATB2, AtbZIP11, BZIP11, GBF6, AT4G34590) (PUX4, AT4G04210) (ASK1, ATSKP1, SKP1, SKP1A, UIP1, AT1G75950) calcium-binding EF hand family protein, peroxiredoxin, PDR-like ABC-transporter, and cystatin Gossypium hirsutum
three-way intercellular junctions (cell corners) correspond to sites of increased deposition of cell wall material Arabidopsis thaliana
central endosperm cells in Brachypodium have relatively thicker cell walls Brachypodium distachyon
xyloglucan (XyG) in cereals or grasses has low degree of substitution
cellulose is present in significant amount in cell wall of coffee endosperm Coffea arabica
arabinoxylans (AX) is major component of wheat grain cell walls
(XEG113, AT2G35610) gene is involved in plant cell wall biosynthesis Arabidopsis thaliana
At (ATRHM1, RHM1, ROL1, AT1G78570) is closely related A. thaliana orthogroup member Arabidopsis thaliana
data on meristematic cell wall construction suggest key role of CSLD gene family glycosyltransferase
ktn1-2 clasp-1 pavement cells have a cell-bursting phenotype possibly due to a combination of pavement cells being unable to minimize stress in conjunction with changes in the deposition of cellulose or other cell wall components
GO-term analysis showed enrichment in cell wall organization Marchantia polymorpha
genes for uridinediphosphate (UDP)-galacturonic acid synthesis are downregulated in triple mutant pollen Arabidopsis thaliana
P. hallii transcriptome assembly includes major genes associated with synthesis of cell wall polysaccharides Panicum hallii
cellulose synthase transcripts number 17 transcripts Panicum hallii
GT47 homolog expression pattern is in cluster 4 Panicum hallii
glycosylphosphatidylinositol (GPI)-anchored proteins (GAPs) is important for synthesis and secretion of cell wall polymers
Zmccr1 mutant shows down-regulation of glycosyltransferase 6 Zea mays
(PNT1, AT5G22130) mutant causes general reduction in GAPs Arabidopsis thaliana
caffeic acid O-methyltransferase (COMT) is enzyme in cell wall biosynthesis pathway Gossypium hirsutum
Mp GDP-MANNOSE PYROPHOSPHORYLASE (Mp GMP) encodes protein predicted to function in synthesis of cell wall polysaccharides Marchantia polymorpha
tri-1 plants exhibit impaired biosynthesis of cell wall in root tips Arabidopsis thaliana
lower arabinose content results in shorter sugar chains of arabinogalactanproteins Arabidopsis thaliana
sucrose synthase is enzyme in cell wall biosynthesis pathway Gossypium hirsutum
Bc6 culms exhibits 34% increase in proportion of hemicellulose in cell wall polysaccharides Oryza sativa
U73122 treatment prevents cell wall synthesis
tube wall is not always thick in the region where cell wall components deposit
low R/FR ratio increases absolute levels of cell wall carbohydrates Helianthus annuus
additional cDNA encoding a product with potential roles as a structural cell wall protein was identified as down-regulated in woolly peach Prunus persica
defence-related proteins are directly involved in structural organization of cell walls
cell wall synthesis is examined by observation of effects of pharmacological reagents Porphyra yezoensis
silicic acid induces cell wall fortification of rice leaves Oryza sativa
First subgroup of cell wall genes comprises 16 ESTs with homologies to genes encoding cell wall proteins Gossypium hirsutum
L-galactose is reported to be in cell walls Actinidia deliciosa; Actinidia chinensis; Actinidia eriantha
β-1,3 glucan hydrolase was significantly up-regulated in seedless fruits Solanum lycopersicum
protoplasts are regarded as particularly suitable for studying cell wall biosynthesis
lipid transfer protein plays a role in cell wall biosynthesis
sequential deposition of primary and then secondary cell wall compounds is orchestrated at transcription level Coffea arabica
cell-wall biosynthesis is sensitive to functionality of nascent ribosomes
pectin is composed of rhamnogalacturonan I
kinesin is involved in cellulose microfibril deposition Arabidopsis thaliana
epidermal cell morphology defects in (AGY1, AtcpSecA, SECA1, AT4G01800) could be due to shortage of cell wall materials Arabidopsis thaliana
locally induced genes include genes linked to cell wall synthesis
(ATTOP6B, BIN3, HLQ, HYP6, RHL3, TOP6B, AT3G20780) mutant has generalized perturbation in cell wall composition Arabidopsis thaliana
plant cell walls are complex carbohydrate polymers
homogalacturonan (HGA) is pectin polymer
proteins related to cell wall synthesis are down-regulated in OMTN overexpressors Oryza sativa
chitin is important structural component of the fungal cell wall
putative cinnamoyl-CoA reductases increased their expression in grapes at EL33 Vitis vinifera
Collén et al. (2006) identified numerous genes potentially involved in the construction of the cell wall or the extracellular matrix in red algae red algae
laccase is enzyme in cell wall biosynthesis pathway Gossypium hirsutum
expression of cell wall-related proteins is well affected by altered gravitational fields
RGPs are possibly involved in cell wall biosynthesis
mutations at (ABI8, ELD1, KOB1, AT3G08550) / locus disrupt cellulose synthesis Arabidopsis thaliana
bc1 mutant exhibits similar increase in hemicellulose content Oryza sativa