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carbon metabolism

8875 relationships annotated with this phrase. Showing first 500 of 8875.
Source entity Relationship Target entity Species
growth inhibition in Δ slr1064 mutant was observed only in presence of glucose Synechocystis
persulfidated proteins there is enrichment of those involved in carbon metabolic pathways and photosynthetic routes Arabidopsis thaliana
quantitative proteomics analysis revealed limited number of proteins involved in carbon metabolism significantly altered in Δ slr1064 mutant Synechocystis
Δ slr1064 mutant showed defective growth in presence of glucose Synechocystis
tree with older NSC pool may be less impacted by transient disruptions to carbon uptake
slr1064 deletion disrupts assembly of the (PRK, AT1G32060) /GAPDH/ (CP12, CP12-2, AT3G62410) complex under dark culture conditions Synechocystis sp. PCC 6803
nonstructural carbohydrates (NSC) is physiological intermediate between carbon uptake and metabolism
Δ sll1961 mutant indicating dependence on alternative carbon sources Synechocystis
Slr1064 may contribute to carbon metabolism under mixotrophic and heterotrophic conditions Synechocystis sp. PCC 6803
tomato (FHY2, FRE1, HY8, PHYA, AT1G09570) regulates carbon flux in dark-grown seedlings Solanum lycopersicum
glucose-induced growth inhibition phenotype of Δ slr1064 mutant may be related to (CP12, CP12-2, AT3G62410) and Gap2 proteins Synechocystis
Slr1064 modulates levels of UDP-GlcNAc Synechocystis sp. PCC 6803
Gap2 plays crucial role in mixotrophic conditions rather than autotrophic conditions Synechocystis
Δ glk mutant did not grow under mixotrophic conditions Synechocystis
little below-ground biomass in Halophila uninervis results in less below-ground respiratory demand Halophila uninervis
slr1064 deletion hampers turnover rate of Gap2 under mixotrophic conditions Synechocystis sp. PCC 6803
complex I (NADH-ubiquinone oxidoreductase) plays roles in recycling of mitochondrial CO2-HCO3-
one year of extreme drought had no impact on NSC age Pinus edulis
trees after a decade of drought apparently consumed old stored NSC Pinus edulis
further consumption of storage carbon leads to carbon starvation
non-structural carbohydrates is simulated at BC
Δ aqpZ mutant exhibited growth inhibition phenotype similar to Δ slr1064 strain Synechocystis
Slr1064 is involved in carbon metabolism Synechocystis sp. PCC 6803
large reduction in R dark_Tg : V cmax_Tg with warming indicates greater carbon-use efficiency
NSC age could provide unique information on tree carbon balance
long-term drought stress impacts tree carbon reserves
carbon in Arabidopsis roots stayed almost all in water-soluble compounds after 4 hours and was back to comparable levels as control after 24 hours under salt stress in Arabidopsis roots Arabidopsis thaliana
Δ slr0280 mutant resulted in slower growth than WT under mixotrophic conditions Synechocystis
Δ glk mutant indicating dependence on alternative carbon sources Synechocystis
one year of extreme drought had no impact on NSC pool size Pinus edulis
glk gene inactivation results in increased growth inhibition of glucose under mixotrophic conditions Synechocystis
nocturnal heating consistently decreased carbon content
lower soluble carbohydrate levels is typically good indicator of carbon deficiency Posidonia australis
Slr1064 serves as central regulator of primary carbon metabolism Synechocystis sp. PCC 6803
transitory starch in chloroplasts could serve as alternative carbon sink in ADT-deficient plants Arabidopsis thaliana
carbon metabolism comprises oxidative pentose phosphate pathway Synechocystis sp. PCC 6803
decrease of total C from wild-type levels is less pronounced in s1c2 compared with sir1-1 Arabidopsis thaliana
low Pi levels switch carbon flow to starch accumulation
direction of carbon fluxes have been presented based on the concurrence of network analyses with lipids, FFA, and ATP levels Chlamydomonas reinhardtii
sucrose can serve as carbon source Arabidopsis thaliana
Os- (ASL39, LBD37, AT5G67420) overexpressor lines show general reduction in carbon metabolism Oryza sativa
carbon flux toward glycolysis in the (ATVPS34, PI3K, VPS34, AT1G60490) KD is contrary to high starch mutants following gamma irradiation Chlamydomonas reinhardtii
growth has inverse relationship with buildup of carbon stores
decreasing temperatures directly influence carbon metabolism
Phosphatidylinositol 3-kinase (ATVPS34, PI3K, VPS34, AT1G60490) signaling influences carbon metabolism Chlamydomonas reinhardtii
long-term darkness leads to carbon starvation
sucrose synthase plays major role in carbon metabolism regulation
reduced CO2 assimilation combined with same starch production in (ATRAPTOR1B, RAPTOR1, RAPTOR1B, AT3G08850) indicates significantly lower amounts of fixed carbon partitioned to anabolic processes Arabidopsis thaliana
strongly induced carbon assimilation rate under elevated CO2 allows for increased storage as well as increased growth Populus trichocarpa
carbon isotope approaches use combination of isotope effects associated with carbon metabolism
starch contents revealed inverse relationship with secondary metabolite data Arabidopsis thaliana
(APR, APR1, ATAPR1, PRH19, AT4G04610) (adenosine-5′-phosphosulfate reductase) is regulated by carbohydrate levels
sucrose is involved in carbon partitioning
Δ sll1961 mutant displayed growth inhibition in presence of glucose Synechocystis
photosynthesis and respiration are temperature-sensitive and interdependent
malate dehydrogenase (MDH, pNAD-MDH, AT3G47520) is characteristic of plant metabolism
genes showing similar transcriptional response in both A9:u-ATP9 and AP3:u-ATP9 transgenic lines include 6 genes involved in carbon metabolism Arabidopsis thaliana
decrease in fumaric acid content explains specific imbalance in central C-metabolites Arabidopsis thaliana
slow conversion of triose-phosphate into sucrose in the cytosol sequesters Pi in sugar-phosphates
decrease in PDC activity is in agreement with decrease in PDC activity and alteration of TCA cycle in Arabidopsis cells after rotenone Arabidopsis thaliana
glucose is involved in carbon partitioning
external trehalose feeding can have marked effects on carbon partitioning
(MDH, pNAD-MDH, AT3G47520) activity increases in transgenic lines
juvenile plants have higher carbon reserves, including sucrose and soluble sugars Arabidopsis thaliana
malate and fumarate are degraded at night in Arabidopsis leaves Arabidopsis thaliana
increment in total (MDH, pNAD-MDH, AT3G47520) activity suggests activation of alternative route to glycolysis
increment in total (MDH, pNAD-MDH, AT3G47520) activity leads to increase in accumulation of oxaloacetate
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show increased expression of Malate dehydrogenase, cytosolic (c-NAD-MDH1, AT1G04410) Arabidopsis thaliana
futile cycling at the level of carbon metabolism can contribute substantially to total respiratory metabolic rate
differentially expressed genes in F1 hybrids were involved in glyconeogenesis pathway Oryza sativa
MDH410 (c-NAD-MDH1, AT1G04410) shows increased transcription levels in A9:u-ATP9 and AP3:u-ATP9 transgenic lines
nitrogen availability noticeably affects partitioning of assimilated C between synthesis of organic acids, starch, and sucrose
primary root (PR) increased the consumption of energy substrate at 80 DAS Aconitum kusnezoffii
impairment of carbon metabolism and utilization appears to be among central factors causing abnormal development and yield loss under heat stress
(MDH, pNAD-MDH, AT3G47520) activity is increased in A9:u-ATP9 transgenic line
respiration is main sink for photosynthates
carbon flux goes toward glycolysis Chlamydomonas reinhardtii
alternative oxidase (AOX) was necessary to maintain photosynthetic carbon balance Nicotiana tabacum
fine computations plants and cyanobacteria perform manage carbon reserves plants; cyanobacteria
(AT-GTL1, ATGTL1, GTL1, AT1G33240) downstream target genes encode ribosomal proteins
mitochondrion contains tricarboxylic acid cycle
Trehalose 6-phosphate (Tre6P) links carbon status
other forms of carbon storage may be at least partially blocked under canopy shade conditions
regulatory networks govern carbon fixation
heterologous overexpression of trehalose biosynthesis genes can have marked effects on carbon partitioning
nectar sucrose-to-glucose ratio is significantly lower in flowers treated with potassium nitrate potassium nitrate treatment Cucurbita pepo
phosphoenolpyruvate carboxylase is gene candidate for improvement of carbon metabolism
futile cycling at the level of carbon metabolism can lead to lowered conversion efficiency
plant growth relies on carbon fluxes
high temperature (HT) leads to changes in carbon metabolism
modulation of alternative pathway respiration was strongly correlated with cumulative amount of C fixed in leaves Erythronium americanum
protein encoding (ATNADP-ME2, NADP-ME2, AT5G11670) may have particular physiological role in sepal tissue Nicotiana tabacum
fine computations plants and cyanobacteria perform prevent starvation plants; cyanobacteria
sugars serve as substrates in carbon and energy metabolism
light receptors, energy-producing pathways, and CO2-concentrating mechanism (CCM) regulate carbon metabolism
sugars act as substrates and modulators of enzyme activity in carbon-related pathways
redox control could become relevant for re-allocation of fixed carbon in mesophyll cells in response to stress conditions
pollen and pollen tubes are rapidly expanding, non-green sinks that depend on supply with organic carbon Arabidopsis thaliana
in vitro enzyme activities showed no decline in rate at high temperature 40 °C Zea mays; Oryza sativa; Arabidopsis thaliana
intensive CO2 fixation at pod formation results in clearly lower net CO2 release per unit roots and nodules
non-functional photosynthetic tissues become unnecessary carbon sink
respiration/photosynthesis ratio is important for carbohydrate metabolism
organic acids from the TCA cycle eventually formed combined with previous loss of carbon from pyruvate
SG clone source leaf carbon-to-nitrogen ratio decrease is not due to decrease in total carbon
Rubisco is gene candidate for improvement of carbon metabolism
increased energy substrate consumption in primary root (PR) at 80 DAS was the opposite of lateral root (LR) Aconitum kusnezoffii
conversion of HCO3– to CO2 could result in increased stromal CO2 levels
NH4Cl supply decreases Tre6P Arabidopsis thaliana
constitutive expression of heterologous TPS causes lower sucrose Arabidopsis thaliana
carbon isotope composition (δ13C) of peduncles exhibited lower values than carbon isotope composition (δ13C) of grains
primary root (PR) enhanced sucrose synthesis and decreased sucrose decomposition at 80 DAS mobilization of energy substrate such as water-soluble sugars (WSS) Aconitum kusnezoffii
nodules at pod formation had depleted reserves of organic acids
improved understanding of physiology of carbon metabolism (especially respiration) and influences of nutrient feedbacks will be of particular value for improvements in predictive abilities of dynamic global vegetation models
attenuated growth inhibition of salinized HSP70::IPT plants exposed to elevated root zone temperature may be via improved carbon status due to delayed leaf senescence Solanum lycopersicum
N-starved seedlings have over three times Tre6P Arabidopsis thaliana
KNO3 supply shows slight non-significant decrease in Tre6P Arabidopsis thaliana
nodule CO2 fixation feeds nodule malate supply
marker genes of carbon metabolism participate in carbon metabolism Zea mays
10 enzymes involved in carbon metabolism exhibited monotonous exponential responses across temperature range 10–40 °C
respiration rates measured in relation to photosynthesis
differentially expressed genes in F1 hybrids were involved in glycolysis pathway Oryza sativa
line 432 has 1% higher shoot carbon content than line 282 Arabidopsis thaliana
nodules at pod formation still had sufficient sugars
phosphoenolpyruvate (PEP) can be delivered from cytosol to plastids via (PAS2, PEP, PEPINO, AT5G10480) /phosphate translocator (ARAPPT, CUE1, NOX1, PPT, AT5G33320)
flooding treatment increases phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) relative to control Eucalyptus globulus
soluble leaf carbon has been regarded as carbon pool most likely to reflect short-term physiological status Eucalyptus globulus
phloem sap obtained from field-grown E. globulus have shown higher concentrations of sugars than those found here Eucalyptus globulus
sugar concentration in phloem saps correlated negatively with photosynthesis Ricinus communis
data in this report support hypothesis that the ability to convert sugar into organic acids was limited or at least on the edge of limitation at pod formation
10 enzymes involved in C metabolism activities increased from 5 °C to 40 °C following Eyring equation without decrease in activity until at least 40 °C Zea mays; Oryza sativa; Arabidopsis thaliana
higher productivity could be partially due to dissolved inorganic carbon (DIC) incorporation Lactuca sativa
reduced leaf growth rate is independent of carbohydrate supply
integrated study of metabolic changes induced by post-harvest heat treatment (HT) in peach cv 'Dixiland' was carried out metabolic changes in peach cv 'Dixiland' after heat treatment Prunus persica
carbon (C) acquisition and assimilation is major challenge for global agriculture, food security, and ecological sustainability
impairment of plastidial functioning in vascular bundles may disturb carbon supply to the nodule Medicago truncatula
Rubisco has been characterized for quantity and activity legumes
circadian clock controls expression of genes related to carbon metabolism Arabidopsis thaliana
sucrose phosphate synthase (SPS) is probably important for driving export and secretion of nectar sugar nectar sugar secretion Cucurbita pepo
proportion of labelled to non-labelled sucrose was higher in non-stressed controls Pisum sativum
non-starved seedlings have Tre6P Arabidopsis thaliana
sucrose and 2-DOG supplied together causes only small rise in Tre6P Arabidopsis thaliana
pyruvate dehydrogenase (PDH) controls stomatal closure Hordeum vulgare
modulation of sink C metabolism is modulated in response to changes in C availability Erythronium americanum
leaf C content per unit dry weight does not differ significantly between different light treatments
nodule carbon pools includes α-polyhydroxybutyrate
(Plsp2B, TPP, AT2G30440) expression causes increase in sucrose Arabidopsis thaliana
carbon isotope composition (δ13C) of awns exhibited slightly higher values than carbon isotope composition (δ13C) of grains
Nod– genotype shows high proportion of C respired by roots despite roots not being nodulated
extreme heat episodes are expected to impair cell anapleurotic carbon metabolism
PEPC activity in petals increased at stage 7 Nicotiana tabacum
saving C3 skeletons through alanine synthesis avoids shortage in carbon availability
phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) is less negative than bulk leaf carbon isotopic signature (δ13C leaf) Eucalyptus globulus
drought experiments focused on tissue carbohydrate stores
water deficit negatively affects plant carbon status by impairing carbon metabolism
modulation of source C metabolism mostly appeared to respond to growth conditions Erythronium americanum
water deficit treatment increases phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) relative to control Eucalyptus globulus
up-regulation of phosphoglycerate mutase (PGAM) and down-regulation of adenosine diphosphate glucose pyrophosphatase (AGPPase) show altered protein pattern that can enhance carbon utilization for storage and energy in elevated CO2
intracellular carbon fluxes in Cyanophora paradoxa significantly deviate from those observed in green algae and their derivatives Cyanophora paradoxa; green algae
studies on changes in sugar and organic acid metabolism during peach fruit ripening contributed to identification of important components of carbon metabolism during peach fruit ripening Prunus persica
OAA formation in the TCA cycle occurs with CO2 release on root/nodule basis
SnRKs regulate carbon metabolism
sink organ growth strongly depends on carbon supply
Chionographis foetida (CF) exhibits faster kinetics of 13C decline in leaf organic matter Chionographis foetida
low water availability reduces plant carbon balance
fructose increases progressively with supplied sucrose concentration Arabidopsis thaliana
soil water deficit causes rise in carbon concentrations
efficient carbon utilization in thermal A. scabra may be involved in root survival under high soil temperatures Agrostis scabra
soluble sugars contribute to organoleptic quality Prunus persica
stimulation of PEPC activity could compensate for C loss induced by Rubisco alteration under elevated O3 Erythronium americanum
sucrose + 2DOG supply decreases or leaves unchanged UDPG Arabidopsis thaliana
S-starved seedlings have no difference in Tre6P content Arabidopsis thaliana
increased ROS production decreases C metabolism
PEPC expression was higher in petals at stages 6 and 7 Nicotiana tabacum
PEPC (phosphoenolpyruvate carboxylase) is highest at anthesis Nicotiana tabacum
BG does not seem to compensate for the missing carbon remobilization from starch in the AO line Hordeum vulgare
MG132 causes rise to higher levels in Tre6P Arabidopsis thaliana
carbon isotope composition (δ13C) of water-soluble fraction (WSF) before irrigation showed tendency to higher values than carbon isotope composition (δ13C) of water-soluble fraction (WSF) after irrigation
PEPC (phosphoenolpyruvate carboxylase) activity is increased at stage 7 Nicotiana tabacum
flooding treatment causes changes in phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) Eucalyptus globulus
flooding treatment does not reflect in phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) Eucalyptus globulus
unaffected net photosynthesis with increasing volatile organic compound (VOC) emissions would indicate changes in carbon balance through enhanced carbon release back to atmosphere Betula pendula
inhibition of photosynthesis leads to negative carbon balance
intracellular nitrate (NO3-) and (AtNIT2, NIT2, AT3G44300) participate in control of carbon (C) partitioning into different carbon storage pools Chlamydomonas
UDPG rises about 2-fold as exogenous sucrose concentration increases up to 4mM Arabidopsis thaliana
Tre6P is highly correlated with sucrose Arabidopsis thaliana
Tre6P is less strongly correlated with UDPG Arabidopsis thaliana
differentially expressed genes in F1 hybrids were involved in Calvin cycle Oryza sativa
genetic and organ-specific control governs main steps of carbon metabolism Zea mays
seed proteins are involved in carbon metabolism Cunninghamia lanceolata
starch content is much higher in line F2 compared with lines (B73, CHL6, CNX, CNX1, SIR4, AT5G20990) and Io Zea mays
shoot growth maintenance in induced HSP70::IPT plants under salinity may result from increased source capacity to produce and/or export more assimilates Solanum lycopersicum
increased PEPcase expression may be supporting other C needs in the cell Zea mays
Sucrose non-fermenting-1 (SNF1)-related protein kinases (SnRKs) take their name from SNF1
respiration is central to all carbon metabolism pathways
bulb respiratory rate is strongly correlated with cumulative amount of C fixed in leaves Erythronium americanum
Δ glk mutant displayed growth inhibition in presence of glucose Synechocystis
downregulation of Glk and FbaA was initially considered as potential explanation for glucose-induced growth inhibition phenotype of Δ slr1064 Synechocystis
overexpression of glk gene in Δ slr1064 strain failed to rescue cells and exacerbated growth inhibition under mixotrophic conditions Synechocystis
2021 showed carbon content significantly higher than 2020 and 2022
(PPDK, AT4G15530) (pyruvate orthophosphate dikinase) is remarkably high in petals Nicotiana tabacum
(Plsp2B, TPP, AT2G30440) expression decreases Tre6P:sucrose ratio Arabidopsis thaliana
reduced export of carbon in the form of triosephosphates from chloroplasts explains starch accumulation during phosphate limitation Arabidopsis thaliana
carbon metabolism comprises Calvin cycle Synechocystis sp. PCC 6803
Δ hik31 mutant indicating dependence on alternative carbon sources Synechocystis
growth abnormalities in Δ slr1064 are caused by accumulation of certain metabolites in carbon metabolism pathways Synechocystis
repressed expression-activation-damage-degradation cycle of Gap2 in Δ slr1064 results in insufficient supply of functional Gap2 to support mixotrophic growth Synechocystis
plastid glucose-6-phosphate dehydrogenase 3 (G6PD3, AT1G24280) participates in regulating gene expressions involved in carbon metabolism Arabidopsis thaliana
C metabolism driven towards TCA cycle leads to synthesis of compounds derived from TCA cycle Solanum lycopersicum
2-DOG has no effect on sucrose levels Arabidopsis thaliana
non-starved seedlings have no difference in Tre6P content Arabidopsis thaliana
K252a strongly inhibits sucrose-induced rise in Tre6P Arabidopsis thaliana
MG132-treated seedlings have slightly less hexose phosphates Arabidopsis thaliana
UDP-GlcNAc is downregulated in Δ slr1064 mutant Synechocystis sp. PCC 6803
carbon metabolism comprises gluconeogenesis Synechocystis sp. PCC 6803
serine plays a key role in carbon metabolic network
sorbitol has no effect on rise in Tre6P Arabidopsis thaliana
carbon availability insufficiency causes carbon starvation
isohydric (dehydration avoiding) plants are theoretically more likely to die of carbon starvation
present study aimed to identify enzymes involved in carbon metabolism during the peach ripening process after harvest Prunus persica
nodule carbon pools includes starch
Tre6P is less strongly correlated with fructose Arabidopsis thaliana
Tre6P is less highly correlated with sucrose Arabidopsis thaliana
KCl addition has no effect on Tre6P Arabidopsis thaliana
metabolite and/or transcript profiling analysis is used to elucidate coordination of nitrogen and carbon metabolism Arabidopsis thaliana; Oryza sativa; Solanum lycopersicum; Zea mays; Populus
improved C fixation may improve C nutrition at whole plant level
P starvation causes only small non-significant changes in Tre6P content Arabidopsis thaliana
K2SO4 supply causes slight decrease in Tre6P Arabidopsis thaliana
calyculin A strongly inhibits response of Tre6P to sucrose feeding Arabidopsis thaliana
sugars serve as source of reduced carbon
2-DOG has no effect on Tre6P Arabidopsis thaliana
Tre6P is more highly correlated with fructose Arabidopsis thaliana
Tre6P:sucrose ratio is similar in MG132-treated and control seedlings Arabidopsis thaliana
carbon isotope composition (δ13C) of awns was highest among carbon isotope composition (δ13C) of different plant organs
cycloheximide-treated seedlings tend to have higher hexose phosphate and UDPG levels Arabidopsis thaliana
circadian clock controls carbon fluxes
Tre6P correlates positively with sucrose Arabidopsis thaliana
carbon isotope composition (δ13C) of flag leaf blades was lowest among carbon isotope composition (δ13C) of different plant organs
carbon conversion efficiency (CCE) is cell culture growth parameter Arabidopsis thaliana
sucrose performs many of the same functions as trehalose
phosphate (Pi) is associated with dynamic changes in carbon fluxes
phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) is less negative than leaf sugar carbon isotopic signature (δ13C sug) Eucalyptus globulus
Tre6P correlates less well with Glc6P Arabidopsis thaliana
glucose feeding increases more slowly glucose Arabidopsis thaliana
(GNR1, NIA1, NR1, AT1G77760) mutant strain displays stimulation of acetate uptake Chlamydomonas
phosphate starvation causes accumulation of carbon as storage lipids (TAG) Arabidopsis thaliana
down-regulation of key starch synthesis genes results in carbon flux going toward glycolysis Chlamydomonas reinhardtii
G6P-DH (glucose-6-phosphate dehydrogenase), PEPC (phosphoenolpyruvate carboxylase), and NADP-ME (NADP-malic enzyme) activities in sepals are similar in leaves and sepals Nicotiana tabacum
Tre6P correlates with fructose Arabidopsis thaliana
short and long-range signalling pathways respond to carbon (C) metabolism
highly enhanced accumulation of secondary metabolism may divert limited carbon sources from being converted to growth-related compounds Nicotiana attenuata
shaded leaf adjustment of photosynthetic machinery to very low irradiances maintains positive carbon balance
sucrose + 2DOG supply decreases or leaves unchanged hexose phosphates Arabidopsis thaliana
constitutive expression of heterologous TPS causes higher Tre6P Arabidopsis thaliana
source leaves of pgm1pgm2 trees assessed for carbon depletion Populus tremula × tremuloides
phosphoglucomutase (ATPGMP, PGM, PGM1, STF1, AT5G51820) strongly affects rate of leaf production (RLP) and plastochron (PLR) Arabidopsis thaliana; Oryza sativa; Zea mays
nodule growth and nitrogen fixation consumes considerable amounts of carbon
transcript levels of PEPC were also up-regulated in mature OE ripe fruits Solanum lycopersicum
fructose feeding increases more slowly Tre6P Arabidopsis thaliana
aqpZ, hik31 and abrB mutants show decreased expression of genes associated with carbon assimilation Synechocystis sp. PCC 6803
dead-kinase mutant (ATSNAK2, GRIK1, AT3G45240) bearing K137R mutation did not restore growth in non-fermentable carbon sources Saccharomyces cerevisiae
carbohydrate biosynthesis uses atmospheric CO2 and H2O
SWEET class of sugar transporters results in complete reprogramming of carbon partitioning in plants
PEPC protein level correlated with enzyme activity in both tissues analysed Nicotiana tabacum
carbon isotope composition (δ13C) of peduncle showed genotypic differences in six selected genotypes
female gametes are also sensitive to disruptions in carbon flux
photosynthesis relies on respiration for compounds
overexpression of gap2 gene in Δ slr1064 mutant rescued Δ slr1064 cells under mixotrophic conditions Synechocystis
PtaSUT4 could be central factor for the adaptation of the leaf carbon balance in response to environmental stimuli Populus trichocarpa
microbial quiescence is characterized by accumulation of carbon storage compounds
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show increased expression of Malate dehydrogenase, cytosolic (c-NAD-MDH2, AT5G43330) Arabidopsis thaliana
glycosyltransferases (GTs) involvement in regulating carbon metabolism has not been reported in Synechocystis Synechocystis sp. PCC 6803
Δ sll1961 mutant did not grow under mixotrophic conditions Synechocystis
GO term analysis detects sporophyte-specific upregulation of a carbon consumption-related pathway Physcomitrella patens
relatively longer fiber length and larger seed size in RNAi lines may be due to alterations in carbon allocation
shoot loss in large seagrasses under prolonged light deprivation serves to minimize the respiratory demand
large seagrasses like Posidonia australis must maintain a balance between photosynthetically produced carbon and high carbon respiration of above- and below-ground organs Posidonia australis
regulatory mechanisms of carbon metabolism in Synechocystis are elucidated by insights into (CP12, CP12-2, AT3G62410) regulation of Calvin cycle enzymes and Slr1064 function Synechocystis
modification of genes that regulate carbon metabolism at the transcriptional or post-translational level has been identified as potent approach toward manipulating cellular metabolite dynamics Synechocystis sp. PCC 6803
tissue-specific nonphotosynthetic fractionation is theoretically related to metabolism and biochemical partitioning (e.g. fractionation and metabolic allocation to cellulose, soluble carbohydrates, lignin and waxes)
Δ pmgA mutant exhibited growth inhibition phenotype similar to Δ slr1064 strain Synechocystis
Slr1064 protein is first reported instance of glycosyltransferase participating in carbon metabolism Synechocystis
plant productivity is dependent on allocation of reduced carbon into growth and reproduction processes
(ATVPS34, PI3K, VPS34, AT1G60490) signaling has a role in starch and carbon metabolism Chlamydomonas reinhardtii
increase in R dark_Tg : V cmax_Tg with cooling reduces carbon-use efficiency
Slr1064 inability to utilize glucose displayed in absence of glucose utilization Synechocystis
Δ pmgA mutant displayed growth inhibition in presence of glucose Synechocystis
warm-affiliated species significantly increased carbon-use efficiency with cooling
red light is involved in accumulation of carbon in the macroalga Porphyra leucosticta Porphyra leucosticta
light-deprived Posidonia australis leaves likely became carbon limited over time Posidonia australis
cold-affiliated species failed to improve carbon-use efficiency (by not lowering their R dark : V cmax) with warming
Δ hik31 mutant displayed growth inhibition in presence of glucose Synechocystis
carbon starvation takes time tree carbon reserves resilience to extreme disturbance in the short term Pinus edulis
carbon metabolism comprises glycolysis Synechocystis sp. PCC 6803
glycosyltransferases (GTs) regulate carbon metabolism in Synechocystis Synechocystis sp. PCC 6803
Δ slr0280 mutant displayed growth inhibition in presence of glucose Synechocystis
P petE - gap2 / Δ gap2 strain shows similar growth phenotype to Δ slr1064 mutant Synechocystis
clusters with early morning induction are enriched with carbon metabolism Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways Ananas comosus
Os- (ASL39, LBD37, AT5G67420) overexpression causes no significant changes in carbon metabolism metabolites Oryza sativa; Arabidopsis thaliana
starch is degraded at night in Arabidopsis leaves Arabidopsis thaliana
(MDH, pNAD-MDH, AT3G47520) activity is increased in AP3:u-ATP9 transgenic line
lack of GAPCp activity affects carbon metabolism Arabidopsis thaliana
(AtPPT1, HRL1, PPT1, AT4G23660) overexpression enhanced carbon flux coordination between cytosol and chloroplast Arabidopsis thaliana
starch breakdown during day may imply initially fixed carbon of starch is required for additional processes Chlamydomonas
sucrose shows significantly higher intensity in Medicago nodule Medicago
trend to primary carbon metabolism genes can be detected upon ammonium addition Physcomitrella patens
carbon over-allocation to biosynthesis of secondary metabolites only marginally accounts for JA-inhibited stem growth Nicotiana attenuata
flux of newly fixed carbon into sucrose is approximately four orders of magnitude greater than flux into trehalose Arabidopsis thaliana
carbon supply is supplied to nonphotosynthetic cells Arabidopsis thaliana
Slr1064 protein is important in Synechocystis Synechocystis
salicylic acid (SA) has been found to interact with carbonic anhydrase
Δ hik31 mutant did not grow under mixotrophic conditions Synechocystis
starch is energy and carbon storage compound
severe restriction in photosynthates forces plants to switch from autotrophic to heterotrophic metabolism Arabidopsis thaliana
changes of respiratory and photosynthetic rates leads to changes of ratio of respiration and photosynthesis
carbon conversion efficiency of barley grain reaches 95% Hordeum vulgare
capitula showed no significant difference in δ13C between treatments Rhynchospora alba
warm May plants had higher (less negative) δ13C in bulbils in early November Rhynchospora alba
constitutive expression of (ATTSPO, TSPO, AT2G47770) is detrimental to accumulation of carbon reserves in siliques Arabidopsis thaliana
warm-affiliated species are less efficient at colder temperatures
prolonged exposure to light deprivation under future global warming and marine heatwaves might lead to carbon deficit in Halophila uninervis leaves Halophila uninervis
Δ aqpZ mutant displayed growth inhibition in presence of glucose Synechocystis
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show increased expression of Mannose 6-phosphate reductase (NADPH) (AT2G21250) Arabidopsis thaliana
ALI-1 potentially manipulates carbon source–sink balance Triticum aestivum
respiration depends on photosynthesis for substrates
respiration responds to low temperatures to release photoinhibition and accumulate carbohydrates
(AKIN10, KIN10, SnRK1, SnRK1α1, SNRK1.1, AT3G01090) subunit is implicated in regulation of carbon metabolism Arabidopsis thaliana
feedback mechanisms from accumulated photosynthates are essential for regulating carbon metabolism in dynamic light environments Arabidopsis
Suc (sucrose) directly fuels from carbon fixation into anabolic growth processes Arabidopsis thaliana
T411 mutant line bypasses TCA cycle Chlamydomonas reinhardtii
plant supplies carbon in form of dicarboxylic acid such as malate
amount of Suc (sucrose) is decreased significantly in (ATRAPTOR1B, RAPTOR1, RAPTOR1B, AT3G08850) mutants Arabidopsis thaliana
carbon flux is conserved between Brassica napus and Arabidopsis thaliana Brassica napus; Arabidopsis thaliana
Rubisco show no significant difference in wild-type and (NTRC, AT2G41680) mutant plants Arabidopsis thaliana
up-regulation of several glycolysis genes results in carbon flux going toward glycolysis Chlamydomonas reinhardtii
C losses via isoprene under stress greatly exceeds C loss in leaves under non-stressed conditions (0.2–2%)
remaining ~20% C for isoprene biosynthesis might be provided by alternative C sources
plants providing sugars to fungi undergo complete reprogramming of carbon partitioning
(AtFBA3, FBA3, PDE345, AT2G01140) was upregulated in (AtPGR5, PGR5, AT2G05620) and pgrl1 mutants compared with control Chlamydomonas reinhardtii
(PPDK, AT4G15530) is highly efficient in remobilizing carbon skeletons that must be metabolized via pyruvate Triticum aestivum
epiphytic bacteria utilize loline as carbon source
deregulated carbon metabolism indicates reduced photosynthesis efficiency Solanum lycopersicum
accumulation of sulfate causes substantial decrease of total C in sir1-1 Arabidopsis thaliana
carbon incorporation into different compounds and soluble sugars in water-soluble compounds were maintained at comparable levels as control conditions after 4 and 24 hours salt treatments in Schrenkiella parvula roots Schrenkiella parvula
expression bias is reflected in difference in appearance of the P. patens tissue Physcomitrella patens
altered sucrose/hexose ratio can modify carbon partitioning Arabidopsis thaliana
warm-affiliated species will benefit from increased carbon-use efficiency under climate warming
carbon consumption-related pathway is sporophyte-specific upregulated sporophyte tissue Physcomitrella patens
C fluxes following sucrose breakdown differ from C fluxes observed after anaplerotic CO2 fixation catalysed by phosphoenolpyruvate carboxylase (PEPc)
reduced total crown leaf area would be consistent with continued perturbation of carbon metabolism in sapwood
reactions in two pathways linked with carbon metabolism (starch degradation, trehalose synthesis) showed flux fold change (fc) > 8 specifically under low carbon Arabidopsis thaliana
fbaA gene expression has been observed under light pulses in presence of glucose Synechocystis
grik1-2 grik2-1 double mutant had glucose-sensitive phenotype Arabidopsis thaliana
expression of (ATSNAK2, GRIK1, AT3G45240) in Δ3K4E cells improved growth in glucose-supplemented AP medium Saccharomyces cerevisiae
metabolic distribution of 13C throughout central metabolism of guard cells has much greater similarity with sink rather than source leaves
drastically reduced growth provides evidence that CINV/ (AtUGP1, UGP, UGP1, AT3G03250) pathway catabolizes sucrose and provides cells with carbon required for growth Arabidopsis thaliana
PEPCs function in refixation of HCO3− released from dark respiration
rapid assimilation of Ammonium (NH4+) in roots is associated with large requirement for carbohydrates
enzyme activities in maize and rice showed no consistent effect of growth temperatures on enzyme activity response measured in assay temperature range 5 °C to 40 °C Zea mays; Oryza sativa
global changes in central metabolism result in differential carbon partitioning Chlamydomonas
carbon deployment to anabolic processes is strictly reduced upon (TOR, AT1G50030) inhibition Chlamydomonas
P II mutants of Arabidopsis thaliana overaccumulate carbon metabolites Arabidopsis thaliana
Cluster 1 genes (Nitrate-C1; 6051 genes) are enriched in pathways of carbon metabolism and amino acid biosynthesis Lotus japonicus
overexpression of (PRK, AT1G32060) gene in Δ slr1064 mutant did not rescue Δ slr1064 cells under mixotrophic conditions Synechocystis
differentially expressed genes in F1 hybrids were involved in tricarboxylic acid (TCA) cycle Oryza sativa
microorganisms channel acetyl-CoA into reduced carbon storage compounds
u-ATP9 plants display modification in expression of genes involved in carbon metabolism Arabidopsis thaliana
MDH330 (At5g43330) shows increased expression in AP3:u-ATP9 transgenic line
photosynthetic carbon assimilation is primary source of carbon for higher plants
whole-plant water use efficiency (WUE plant) is a complex trait influenced by proportion of carbon loss from whole-plant respiration (ϕ c)
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show differential expression of Citrate synthase (ATCS, CSY4, AT2G44350) Arabidopsis thaliana
MDH330 (At5g43330) shows increased expression in A9:u-ATP9 transgenic line
Fe deficiency causes decrease in central carbon metabolites Arabidopsis thaliana
transient accumulation of triacylglycerol (TAG) acts as transient, readily accessible carbon storage pool
respiration affects photosynthetic capacity
(AT-GTL1, ATGTL1, GTL1, AT1G33240) downstream target genes are involved in regulation of carbon metabolism
response to simultaneous copper-iron deficiency (-Cu-Fe) results in switch from autotrophy to heterotrophy Arabidopsis thaliana
Cu-Fe double deficiency causes decrease in central carbon metabolites Arabidopsis thaliana
respiration rate decrease during winter time accumulates carbohydrates
(PAS2, PEP, PEPINO, AT5G10480) /phosphate translocator (ARAPPT, CUE1, NOX1, PPT, AT5G33320) represents main route of (PAS2, PEP, PEPINO, AT5G10480) supply to plastids
red-light-modulated metabolites participate in carbon balance Arabidopsis thaliana
galactose content was found reduced in nodules upon prolonged darkness Medicago truncatula
RT versus ST comparison identified four genes annotated to carbon metabolic pathways
mutation of trehalose biosynthesis genes can have marked effects on carbon partitioning
alternative route to glycolysis seems to be inhibited in plants with mitochondrial dysfunction
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show increased expression of Starch phosphorylase (ATPHS2, PHS2, AT3G46970) Arabidopsis thaliana
(AT-GTL1, ATGTL1, GTL1, AT1G33240) downstream target genes encode Rubisco
restraint of sugar consumption might reduce the amount of experienced carbon starvation Arabidopsis thaliana
SLR1-interacting GROWTH-REGULATING FACTOR4 (AtGRF4, GRF4, AT3G52910) functions as co-regulator of carbon assimilation Oryza sativa
lack of photoassimilate supply at night aggravates heat-induced damage
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show increased expression of Pyrophosphate-fructose-6-P-1-phosphotransferase (AT1G12000) Arabidopsis thaliana
decrease in nitrogen fixation is associated with carbon flux shortage
leaf pyruvate levels decline suggests disruption of carbon metabolism Zea mays
buds started to grow once synthesis of amino acids and other precursors of structural components placed demands on C supply Pisum sativum
LIN6 likely leads to enhanced carbon utilization Solanum lycopersicum
fructose is involved in carbon partitioning
phosphorus (P) deficiency influences balance between synthesis and catabolism of carbon metabolites
PtaSUT4 expression pattern in response to drought, salt stress, and elevated CO2 points to PtaSUT4 as an important factor for determining carbon allocation pattern Populus trichocarpa
Tre6P levels in induced TPS29.2 plants increased significantly above controls from 6 h after induction
carbon sink tissues include roots, filling grains Triticum aestivum
vegetative biomass of a plant is the net result of carbon gain in source tissues, mainly the leaves, carbon loss in respiration, and carbon allocation to other sink tissues such as shoot meristem and roots Arabidopsis thaliana
malate is imported into bacteroid
PpDof5 controls expression of phosphoenolpyruvate carboxylase Pinus pinaster
SlCDF3 controls expression of pyruvate kinase Solanum lycopersicum
N treatment has significant effect on leaf carbon content (C) Lolium perenne
Tre6P levels in induced TPS29.2 plants were significantly higher than Tre6P levels in control plants
inter-related metabolic pathways such as carbon metabolism are most probably also altered in RNAi (ATUPS1, UPS1, AT2G03590) nodules Glycine max
water limitation affects proteins involved in C metabolism legumes
model output shows that careful definition of C reserve compounds Solanum lycopersicum
alternative respiratory pathway balances carbon availability and sink capacity Erythronium americanum
elevated chlorophyll content and photosynthetic efficiency induced by PdGNC overexpression will lead to production of larger C source for plant growth Populus trichocarpa
Rubisco was responsible for high carbon conversion efficiency (CCE) of 82% in soybean embryos
genes in retained syntenous regions revealed pathways associated with gene expression and carbon metabolism Spirodela polyrhiza
accumulation of glucose-6-phosphate and fructose-6-phosphate in OE lines suggests that C metabolism is probably driven towards the TCA cycle Solanum lycopersicum
nrt2.7-2 mutant shows no change in total C content Arabidopsis thaliana
sucrose + 2DOG supply increases fructose Arabidopsis thaliana
mannoheptulose decreases rise in Tre6P Arabidopsis thaliana
phosphate starvation causes accumulation of carbon as plastidic starch Arabidopsis thaliana
roots have very limited capacity for carbon storage Arabidopsis thaliana
Os- (ASL39, LBD37, AT5G67420) does not have dramatic impact on carbon metabolism Oryza sativa
high variability of our data with respect to nodule sugar concentration might be an indication of certain depletion of background reserves like starch or poly-hydroxybutyrate
correlation structure of proteins related to carbon metabolism was less affected by drought conditions than correlation structure of proteins implicated in defense mechanisms
coping with high temperature during vegetative growth requires that wheat be more efficient in processes that control net carbon balance (i.e. photosynthesis and respiration) Triticum aestivum
leaf development has no significant effects on total carbon (C) content
Chloroplastic thioredoxin m (TRX m) mediates light regulation of carbon metabolism
cyanobiont up-regulates carbon metabolism Azolla filiculoides
alternative oxidase (AOX) was necessary to maintain photosynthetic carbon balance during growth at elevated CO2 Nicotiana tabacum
low fruit load leads to increase in metabolic transformation Solanum lycopersicum
nectar sucrose is nearly 30 percent lower in flowers treated with potassium nitrate potassium nitrate treatment Cucurbita pepo
C fluxes through photosynthesis, photorespiration, and respiration are mutually dependent each of these three pathways
chloroplastic carbonic anhydrase is up-regulated protein in metabolic processes category
thermotolerant roots control carbon expenditure for long-term survival
Carbon metabolism pathway (lja01200) is enriched pathway involved in primary metabolism Lotus japonicus
fructose exhibits low turnover rate diurnal cycle
drainage of keto-acids from the TCA cycle constitutes carbon-saving mechanism for roots and nodules
stem diameter variations are influenced by carbon status in tree
enhanced glutamine production could lead to alteration in trehalose levels Populus sp.
transcriptional analysis of leaves from diverse C4 plants provides gene candidates for improvement of carbon metabolism
13CO2 supplementation shows larger fraction of sucrose accumulated in stressed plants has no 13C incorporated
proportion of labelled to non-labelled sucrose was lower in stressed plants Pisum sativum
overexpressing (AtLEC2, LEC2, AT1G28300) in the cts2 β-oxidation mutant has additional effect on re-orientation of carbon flux into TAG
different amounts of C translocated to bulb must induce changes in C metabolism Erythronium americanum
phloem sap carbon isotopic signature (δ13C (PHL, AT1G72390) ) is best correlated with plant growth Eucalyptus globulus
temperature response of leaf respiration, over both the short and long term is likely central in determining wheat net carbon balance and biomass accumulation following high temperature exposure Triticum aestivum
water content plays regulatory role in carbon metabolism from sugars to compounds other than sugars and starch Solanum lycopersicum
roots showed no significant treatment effect on δ13C Rhynchospora alba
cold May treatment resulted in higher δ13C in bulbils and shoots Rhynchospora alba
RILs that maintained high growth rates for longer time had better balance between carbon supply and growth maize
rate of C deposition in metabolites is calculated as difference in total summed C between two time-points divided by time interval Arabidopsis thaliana
majority of proteins identified in Azolla cyanobiont have functions related to translation, stress response, ATP synthesis, and carbon and nitrogen metabolism Azolla filiculoides
altered sub-cellular glucose allocation alters carbon utilization efficiency Arabidopsis thaliana
Calvin–Benson (CB) cycle uses stromal NADPH and ATP for photorespiration
all three genotypes disclosed significant differences in root respiration, photosynthesis and nocturnal respiration in shoots Arabidopsis thaliana
regulatory networks govern carbon storage
starch metabolism is critical for growth
down-regulation of key glycolytic genes contrasts with up-regulation of genes encoding cytosolic (MDH, pNAD-MDH, AT3G47520) isoforms
increment in total (MDH, pNAD-MDH, AT3G47520) activity leads to increase in accumulation of malate
A9:u-ATP9 and AP3:u-ATP9 transgenic lines show decreased expression of Pyruvate decarboxylase (PDC2, AT5G54960) Arabidopsis thaliana
(ATSPS1F, SPS1F, SPSA1, AT5G20280) roots are not carbon limited, but displayed strongly elevated respiration supply exceeding demand Arabidopsis thaliana
NADP malic enzyme (NADP-ME) controls stomatal closure Hordeum vulgare
(PGK1, PGKp1, AT3G12780) (cPGK2, PGK2, PGKp2, AT1G56190) double loss-of-function mutant can survive only when grown on medium supplemented with sucrose and other Calvin-Benson intermediates Arabidopsis thaliana
(AKIN10, KIN10, SnRK1, SnRK1α1, SNRK1.1, AT3G01090) has been shown in vitro to phosphorylate 3-hydroxymethyl-3-methylglutaryl-CoA reductase
distinctive phenotypes related to nitrogen deprivation of the glycogen-deficient mutants are due to blockage of the carbon flux Synechocystis
nectary glucose is significantly higher in nectaries treated with potassium nitrate potassium nitrate treatment Cucurbita pepo
regulation of ADP-glucose pyrophosphorylase (AGPase) and rather limited transcriptional control of primary carbon metabolism in embryos Arabidopsis thaliana
ZmDOF1-2 controls expression of pyruvate kinase Zea mays
differences between induced TPS29.2 and control plants were smaller when soluble sugars (sucrose, glucose and fructose) were included in the calculation
differences between induced TPS29.2 and control plants almost disappeared when starch was also included
chloroplast contains Calvin–Benson (CB) cycle
chloroplast BicA levels in tob BicA likely suitable for adequate levels of inorganic carbon pump function Nicotiana tabacum
Tre6P is negatively correlated with fructose Arabidopsis thaliana
MG132-treated seedlings have slightly less glucose Arabidopsis thaliana
carbon metabolism-related proteins show changes in abundance in soluble chloroplast proteome Arabidopsis thaliana
isotopic composition change was used to study C assimilation and partitioning between leaves and ears Triticum durum
sucrose shows rapid and significant changes in isotopic composition during diurnal cycle
nodule CO2 fixation constitutes carbon-saving mechanism
maltose transporter (MEX) and glucose translocator (GT) function as night pass of carbon from chloroplasts
nodule carbon metabolism is shunted towards malate formation
(KJC1, AT1G74910) -associated phosphopeptides suggests role in carbon primary metabolism Arabidopsis thaliana
cellular energy states support efficient carbon storage
GS activity in vtc1-1 may be affected due to altered carbon availability in vtc1-1 when NH4+ is in excess Arabidopsis thaliana
(PAS2, PEP, PEPINO, AT5G10480) in nodules can either be decarboxylated and feed TCA cycle
chloroplast FBPase (cpFBPase) is key carbon-metabolism enzyme
respiration can avoid feedback inhibition of carbon metabolism pathways
nectary sucrose is not significantly different in nectaries treated with potassium nitrate potassium nitrate treatment Cucurbita pepo
Raf-like kinase is important for plant growth and carbon metabolism Marchantia polymorpha
NAD-GAPDH enzyme has ΔH A ‡ of 36 kJ mol −1 Zea mays; Oryza sativa; Arabidopsis thaliana
incorporation of exogenous dissolved inorganic carbon (DIC) has been demonstrated through incorporation of H14CO3 into organic compounds Lactuca sativa
soluble sugar, starch, and proline contents have similar pattern of expression in the (COB, ATMG00220) and in the kernels of line F2 Zea mays
13Δ of C4 plant biomass is influenced by carbon allocation and partitioning, including photorespiration and dark respiration
Tre6P is less highly correlated with fructose Arabidopsis thaliana
14-3-3 target proteins function in carbon metabolism Arabidopsis thaliana
carbon isotope composition (δ13C) of grain showed no significant genotypic differences in six selected genotypes
actual enzyme levels in maize and rice did not respond to growth temperature Zea mays; Oryza sativa
water deficit is suggested to negatively affect plant carbon status
elevated CO2 conditions caused accumulation of C compounds in leaves Triticum durum
nodule CO2 fixation contributes considerably to overall nodule carbon turnover
tomato fruit sugar concentration is influenced by proportion of metabolic transformation of carbon into sugars, acids, and structural components Solanum lycopersicum
low activities of key enzymes in carbon metabolism may contribute to poor grain-filling Oryza sativa
glucose 6-phosphate (Glc6P)/phosphate translocator (GPT) mediates import of carbon skeletons in the form of Glc6P into plastids
triose phosphate/phosphate translocator (APE2, TPT, AT5G46110) represents day path of carbon