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auxin signaling

82151 relationships annotated with this phrase. Showing first 500 of 82151.
Source entity Relationship Target entity Species
candidate genes for height and leaf area include homologs of auxin response genes Salix purpurea
(AtMYB70, MYB70, AT2G23290) alters auxin signaling Arabidopsis thaliana
PsPALM1a and PsPALM1b have been identified and orthologue of MtARF3 in pea Pisum sativum
mock block control (½B5 agar) did not alter stalk growth Marchantia polymorpha
1220 differentially expressed genes (DEGs) further downregulated by miR394 includes battery of auxin-related genes Arabidopsis thaliana
auxin-related genes expression differs between wild-type (WT) and sh1 mutant Setaria viridis
co-chaperone (p23-1, AT4G02450) establishes auxin distributions Arabidopsis thaliana
suppression of GmHAD1-2 inhibiting lateral root growth is through influencing auxin accumulations Glycine max
thallus growth angle is affected by expression levels of MpPIN2 Marchantia polymorpha
auxin-insensitive mutants have stalks deficient in elongation Marchantia polymorpha
acid growth theory is based on auxin signalling mechanisms different from canonical pathway
SHATTERING1 (SH1) is required for activation of abscission through auxin signaling Setaria viridis
auxin-related DEGs included genes involved in auxin signaling, metabolism and transport Setaria viridis
auxin biosynthesis, signaling pathway, transport, and response-related genes/proteins are highly induced in PtrXB38-OE plants Populus tremula × Populus alba
PALM1, PsPALM1a and PsPALM1b have AuxRE cis-elements in promoters Medicago truncatula; Pisum sativum
elevated auxin levels inhibit cell elongation
Wild-type gemmae grown on media containing either 2,4-D or TIBA phenocopy Mp (ATPIN1, PIN1, AT1G73590) mutants in some aspects Marchantia polymorpha
PtrXB38 overexpression (OE) transgenic plants show upregulation of transcription factor and auxin responsive genes Populus tremula × Populus alba
more lateral root number in (ATCHS, CHS, TT4, AT5G13930) mutant was caused by enhanced capability of auxin transport Arabidopsis thaliana
other isoforms of pPLAs are postulated to be involved in auxin-dependent polarized cell growth via altering auxin transport
ROS may function on downstream component in auxin-mediated signal transduction in root gravitropism Arabidopsis thaliana
CROWN ROOTLESS 1 (CRL1) regulates lateral root initiation Oryza sativa
auxin distribution differs between wild-type (WT) and sh1 mutant Setaria viridis
Slyab2b mutant delays decrease in expression of GH3.8 upon IAA treatment Solanum lycopersicum
OsIAA23 is involved in auxin signaling Oryza sativa
CsARF14 mediates locule cavity (LC) development Cucumis sativus
auxin influences nearly all aspects of plant growth and development including nodule organogenesis Aeschynomene evenia
SAUR genes regulate plant growth and development
auxin response factors ( (ARF5, IAA24, MP, AT1G19850) (ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) (ARF8, ATARF8, AT5G37020) and (ARF11, ARF19, IAA22, AT1G19220) ) regulate RESPIRATORY BURST OXIDASE HOMOLOG proteins (RBOHs) and peroxidases Arabidopsis thaliana
auxin/indole-3-acetic acid (Aux/IAA) proteins interact with ARF proteins
miR393 and (EAT, MIR172, MIR172B, AT5G04275) plausibly have conserved function in regulating auxin signaling
29 auxin-related DEGs were variously up and downregulated in mutant Setaria viridis
ARF proteins are significantly accumulated in PtrXB38-OE root samples Populus tremula × Populus alba
OsTIR1 was significantly induced in absence of leaf sheath Oryza sativa
(ATWRKY52, RRS1, RRS1-R, SLH1, AT5G45260) directly induces expression of OsIAA3 Oryza sativa
actin dynamics affect auxin transport
(CPD45, FHY3, AT3G22170) mutation did not suppress DR5 GUS expression in (AtMAX2, MAX2, ORE9, PPS, AT2G42620) stems Arabidopsis thaliana
RTCS gene is auxin-inducible early auxin-responsive gene Zea mays
auxin-binding protein (ABP, ABP1, AT4G02980) interacts with auxin Arabidopsis thaliana
(FHY2, FRE1, HY8, PHYA, AT1G09570) mutant showed low GUS activity under both high and low irradiances Arabidopsis thaliana
phosphate starvation increases expression of auxin receptor TRANSPORT INHIBITOR RESPONSE1 Arabidopsis thaliana
Aux/IAA family proteins and ARFs inhibit auxin response factors (ARFs) Arabidopsis thaliana
AA (antimycin A) treatment decreases auxin responses Arabidopsis thaliana
(SEU, AT1G43850) and SLKs may facilitate auxin response to support organ development from meristematic tissues Arabidopsis thaliana
OsmiR396-OsGRF6 is involved in auxin signaling Oryza sativa
GFP signal from DR5rev : GFP is weakened by H2O2 treatment during shoot regeneration Arabidopsis thaliana
root-specific IAA response data set was compared with ACC-responsive transcripts Arabidopsis thaliana
auxin transport inhibitor TIBA increased tensile strength holding spikelets on panicle in WT Setaria viridis
auxin response factors (ARFs) were differentially expressed in mutant plants at 38 d Setaria viridis
CsARP1 mediates fruit length Cucumis sativus
auxin strongly modifies root size Arabidopsis thaliana
Sapur.007G103300 is SAUR-like auxin-responsive protein Salix purpurea
(ABCB19, ATABCB19, ATMDR1, ATMDR11, ATPGP19, MDR1, MDR11, PGP19, AT3G28860) mutation controls endocycles via auxin deficiency Arabidopsis thaliana
several ARF genes including (ARF11, ARF19, IAA22, AT1G19220) are downregulated in pPLAIIγ:RNAi line Arabidopsis thaliana
Tomato SlYAB2b binds directly to promoter of auxin-amido synthetase GH3.8 Solanum lycopersicum
synthetic auxin NAA increased tensile strength holding spikelets on panicle in WT Setaria viridis
DR5::GUS-tagged na mutant was examined for pattern of DR5::GUS staining during nodulation Pisum sativum
Sapur.016G008100 is auxin-responsive family protein Salix purpurea
auxin-dependent gene transcription relies on PIN genes
MONOPTEROS (MP) encodes auxin signaling integrator
protein phosphorylation functions in mediating auxin transport
root-type and species-specific divergence occurs in auxin response and downstream regulatory modules
auxin treatment suppresses chloroplast degeneration Setaria viridis
PIN-FORMED auxin transporters play a crucial role in regulating the distribution of auxin, a plant hormone that influences growth and development
auxin co-receptor (AtIAA17, AXR3, IAA17, AT1G04250) controls cell elongation
(AtMYB70, MYB70, AT2G23290) modulates root system architecture Arabidopsis thaliana
ectopic expression of gain-of-function semidominant allele of (AtIAA17, AXR3, IAA17, AT1G04250) in the floral abscission zone (AZ) disrupts auxin signaling Arabidopsis thaliana
loss of the lamina joint is possibly via disruption of auxin signalling pathway Triticum aestivum
adenylate cyclase (AC) activity is associated with transport inhibitor response 1/auxin-signaling F-box proteins ( (AtTIR1, TIR1, AT3G62980) /AFB) auxin receptors
PK2 expression in stems showed depletion following decapitation or node isolation Pisum sativum
(WOX5, WOX5B, AT3G11260) gene expression in the QC is dependent on auxin Arabidopsis thaliana
reduction in free IAA levels of (GNR1, NIA1, NR1, AT1G77760) (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) may indicate that more NAA is required to achieve threshold of DR5 activation Arabidopsis thaliana
(HLH1, PAR1, AT2G42870) and (ADH2, ATGSNOR1, GSNOR, HOT5, PAR2, AT5G43940) have no proper DNA-binding motif but can directly repress SMALL AUXIN UPREGULATED18 (SAUR18, AT3G51200) Arabidopsis thaliana
Down-regulation of both E and GOB results in strong auxin signals throughout the leaf margin Solanum lycopersicum
shade-induced genes include BrIAA29 (INDOLE-3-ACETIC ACID INDUCIBLE29) Brassica rapa
apical auxin maxima is consistent with basipetal gradient of free auxin and auxin-dependent gene induction Brassica rapa
antimycin A (AA) treatment alone caused significant reduction of GUS activity in DR5:GUS seedlings Arabidopsis thaliana
genes up-regulated in vasculature include auxin-responsive genes Arabidopsis thaliana
auxin-related terms were enriched in Group 1 (VS) and Group 3 (VN) Arabidopsis thaliana
many ARF genes were expressed mainly in VS samples Arabidopsis thaliana
sHSP22 OX lines initiated more lateral roots after auxin application Arabidopsis thaliana
Aux/IAA ubiquitylation and degradation releases AUXIN RESPONSE FACTOR (ARF) transcriptional activity Arabidopsis thaliana
sHSP22 modulates auxin response through a change in auxin concentration and affecting auxin response Arabidopsis thaliana
PABA induces significant asymmetric auxin response in epidermal cells of the root TZ-EZ Arabidopsis thaliana
(AGR, AGR1, ATPIN2, EIR1, MM31, PIN2, WAV6, AT5G57090) (At3g23240) is involved in auxin transport
(ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutant transcriptome compared to auxin-regulated genes in wild-type Arabidopsis Arabidopsis thaliana
actin dynamics affect auxin transport by regulating vesicular trafficking of auxin transporters
auxin biosensors have been powerful tools to examine role of auxin during nodulation
na mutants could form auxin-induced pseudonodules upon treatment with auxin transport inhibitor NPA Pisum sativum
nia1nia2 mutants exhibit low level of auxin in roots Arabidopsis thaliana
(AXR5, IAA1, AT4G14560) expression was not significantly affected in (SMAX1, AT5G57710) seedlings Arabidopsis thaliana
auxin transport inhibitor NPA had varied effects on WT tensile strength Setaria viridis
(ARAPPT, CUE1, NOX1, PPT, AT5G33320) mutants have reduction in auxin transport in primary roots Arabidopsis thaliana
small auxin-upregulated RNA (SAUR) genes are upregulated in WT conditions when nodulation is initiated Aeschynomene evenia; Bradyrhizobium vignae
maize rum1 gene encodes auxin-inducible early auxin-responsive gene of the Aux/IAA family Zea mays
CROWN ROOTLESS 1 (CRL1) is target of AUXIN RESPONSE FACTOR (ARF) Oryza sativa
auxin is essential for formation of adventitious roots
protein phosphorylation functions in mediating auxin biosynthesis
application of an agar block containing 10 μM 2,4-D induced stalk bending towards the application site Marchantia polymorpha
flavanols stabilizing PIN dimers regulate auxin efflux Arabidopsis thaliana
auxin-related DEGs were found in other SOMs Setaria viridis
AUXIN SIGNALING F-BOX PROTEIN (AFB) was upregulated in mutant plants at 38 d Setaria viridis
remolding soybean lateral development is mediated by capability of auxin transport Glycine max
DR5::GUS staining in WT roots was observed in root tips, root primordia, and early stages of nodule development Pisum sativum
PALM1 is direct target of Medicago truncatula AUXIN RESPONSE FACTOR3 (MtARF3) Medicago truncatula
thallus growth angle is affected by levels of phytohormone auxin Marchantia polymorpha
auxin signaling fundamentals in bryophytes is similar to flowering plants
orthologous cell fate determinants functions require comprehensive investigation of interactions and crosstalk with auxin and other hormonal signaling
auxin plays key role in regulation of plant growth and development
osaux4 mutants regulates auxin distribution Oryza sativa
auxin/indole-3-acetic acid (Aux/IAA) proteins inhibit auxin signaling by serving as ARF inhibitors
gain-of-function mutant of (AXR5, IAA1, AT4G14560) showed decreased lateral root number Arabidopsis thaliana
pPLAII gene has genetic connection with PIN-FORMED (PIN) auxin transporters
transcriptional activation of ROS production-related genes is involved in polar auxin growth Arabidopsis thaliana
elongated phyllids phenotype is similar to Physcomitrella gametophores treated with excess auxin Physcomitrium patens
exogenous auxin treatment leads to elongated phyllids and stems Physcomitrella patens
gain-of-function mutant of OsIAA3 exhibited auxin-insensitive phenotypes Oryza sativa
auxin response in infected root hairs was detected in Lotus Lotus
auxin has key roles in signaling pathways that affect nitrogen-use efficiency (NUE)
auxin can increase abundance of microRNA164 (EEP1, MIR164, MIR164C, AT5G27807) Arabidopsis thaliana
protein phosphorylation resulting in fast auxin response
noncanonical pathways may immediately switch between states depending on auxin status
NPA (N-1-naphthylphthalamic acid) did not have an effect similar to NAA Setaria viridis
OsIAA11 is involved in auxin signaling Oryza sativa
reductions in PsPIN1, PsPIN2, and PK2 transcripts were largely prevented by auxin Pisum sativum
10-d-old DR5::uidA-expressing Col-0 seedlings grown in rich medium (+Pi/+Suc) with 1 mm 3-MA shows reduced GUS staining in primary and lateral root (LR) tips Arabidopsis thaliana
auxin response is reduced in NO-deficient mutants Arabidopsis thaliana
mutants with elevated auxin levels (yucca, (ALF1, HLS3, RTY, RTY1, SUR1, AT2G20610) (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) ) have characteristic phenotypes comprising elongated petioles, narrow epinastic leaves and cotyledons, short roots, more and longer root hairs Arabidopsis thaliana
(ANP1, MAPKKK1, NP1, AT1G09000) (ANP2, MAPKKK2, NP2, AT1G54960) and (ANP3, AtANP3, MAPKKK12, NP3, AT3G06030) are not required for inhibition of auxin-induced gene expression Arabidopsis thaliana
(AtIAMT1, IAMT1, AT5G55250) overexpression mediates disruption via changes in auxin-induced gene expression Arabidopsis thaliana
three types of lateral roots retrieved in different proportions in maize mutant affected in auxin signaling Zea mays
IAA responses increased toward base of cotyledon
sHSP22 requires (ABI1, AtABI1, AT4G26080) Arabidopsis thaliana
AUXIN/INDOLE-3-ACETIC ACID (AUX/IAAs) blocks activity of auxin response transcription factor (ARF) family
PABA increases overall auxin response Arabidopsis thaliana
RUB1-modified (ATCUL1, AXR6, CUL1, ETA1, ICU13, AT4G02570) participates in SCF (AtTIR1, TIR1, AT3G62980) complex Arabidopsis thaliana
QTL for plant height and leaf area contained multiple auxin response genes Salicaceae purpurea
ectopic expression of a repressive ARF, MpARF3 phenocopies loss of auxin biosynthesis Marchantia polymorpha
PLETHORA genes (AtPLT1, PLT1, AT3G20840) (PLT2, AT1G51190) and (BBM, PLT4, AT5G17430) relay local auxin levels Arabidopsis thaliana
bryophytes have auxin signaling fundamentals similar to flowering plants
NAKED PINS IN YUCCA 2 is enriched in endodermal cells Arabidopsis thaliana
auxin in Arabidopsis roots is capable of increasing abundance of (EEP1, MIR164, MIR164C, AT5G27807) Arabidopsis thaliana
wild-type seedlings was inhibited by 100 nm auxin Arabidopsis thaliana
REVOLUTA (AVB1, IFL, IFL1, REV, AT5G60690) has primary role in auxin signaling
cell-specific auxin-blocking lines were generated to demonstrate importance of auxin metabolism in epidermis Brassica
(BZIP17, AT2G40950) and (BZIP28, AT3G10800) double mutant exhibits impaired gene expression involved in auxin signaling
auxin response genes such as GRETCHEN HAGEN3.6 (DFL1, GH3.6, AT5G54510) and SMALL AUXIN UPREGULATED51 (SAUR51, AT1G75580) are decreased in (DCC1, AT5G50100) mutant Arabidopsis thaliana
auxin gradient is essential for early seedling meristem establishment and maintenance Arabidopsis thaliana
Transcript changes in auxin-related genes suggested increase in or redistribution of auxin concentration Hordeum vulgare
auxin-dependent proteasomal degradation of AUXIN/INDOLE-3-ACETIC ACID (AUX/IAAs) allows activation of auxin response transcription factor (ARF) family
SMALL AUXIN UP RNA (SAUR) contain auxin-responsive elements
elevated auxin levels increase apoplastic pH
fast auxin response required for rapid cellular responses
overexpression of mutagenized OsIAA3 produced gain-of-function mutant Oryza sativa
DR5 promoter activity was activated early in nodule primordia formation in wild-type (WT) plants Pisum sativum
nitric oxide (NO) mediates auxin-mediated root growth and development
ubiquitin proteasome protein catabolic complex involved in regulation of auxin signaling
explants of rms1-1 and rms2-2 treated with exogenous auxin at the distal end exhibited bud outgrowth inhibition in a dose-dependent manner Pisum sativum
application of Indole-3-acetic acid (IAA)-Asp and Indole-3-acetic acid (IAA)-Glu to Arabidopsis thaliana does not promote auxin responses Arabidopsis thaliana
endogenous auxin signaling pathway in transgenics was unaffected Oryza sativa
abi1-2 mutant displayed similar phenotype to abi1-3 mutant Arabidopsis thaliana
sHSP22 (small heat shock protein 22) was identified from differential expressed genes induced by IAA in Col-0 but attenuated in abi1-3 Arabidopsis thaliana
ABI1-dependent transcription of sHSP22 was greatly induced by auxin Arabidopsis thaliana
sHSP22 is involved in auxin-related hypocotyl elongation at high temperature Arabidopsis thaliana
auxin induced expression of sHSP22 Arabidopsis thaliana
(IAA14, SLR, AT4G14550) encodes direct transcriptional repressor of (ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) and (ARF11, ARF19, IAA22, AT1G19220) Arabidopsis thaliana
PROTEIN KINASE2 (PK2) expression measured in stem and bud tissues Pisum sativum
phytochrome A (FHY2, FRE1, HY8, PHYA, AT1G09570) mutant showed reduced auxin signaling status
lack of lateral root formation in ark2-1/pub9-1 plants is because of inability to accumulate auxin in root tips under phosphate starvation Arabidopsis thaliana
TRANSPORT INHIBITOR RESPONSE1 activation triggers ubiquitination and subsequent degradation of AUX/IAA repressors Arabidopsis thaliana
exogenous auxin application increases nitric oxide (NO) production
ARF proteins bind to auxin-responsive elements in promoters
stunted root growth in (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) is propagated by deficit in auxin accumulation Arabidopsis thaliana
auxin transporters are important mitotic signal Arabidopsis thaliana
BrXTH33 is not responsive to exogenous auxin Brassica rapa
DR5:GUS line time course experiment revealed initial drop of GUS activity on antimycin A treatment followed by significant increase then return to normal Arabidopsis thaliana
about one-third of IAAs were down-regulated, albeit less prominently Arabidopsis thaliana
(CER3, FLP1, WAX2, YRE, AT5G57800) and (ATEXP4, ATEXPA4, ATHEXP ALPHA 1.6, EXPA4, XPA4, AT2G39700) are excluded from list of auxin-responsive genes
site of auxin synthesis and responses did not to match in cotyledon
DR5:GUS auxin sensitive reporter is used to monitor auxin responses Arabidopsis thaliana
(ABI3, AtABI3, SIS10, AT3G24650) binds uncharacterized auxin responsive targets Arabidopsis thaliana
light-perceived (AtPIF4, PIF4, SRL2, AT2G43010) regulation of auxin biosynthesis is involved in high temperature-mediated hypocotyl elongation Arabidopsis thaliana
developmental defects in primary root elongation, lateral root initiation, and shoot architecture are caused by abnormal auxin distribution Arabidopsis thaliana
down-regulation of (ATPIN1, PIN1, AT1G73590) (ATPIN3, PIN3, AT1G70940) (PIN5, AT5G16530) (PIN6, AT1G77110) and (ATPIN7, PIN7, AT1G23080) in ark2-1/pub9-1 plants provides evidence that both auxin efflux carriers and signaling proteins are affected Arabidopsis thaliana
MtPIN10 plays an essential role in distal leaf margin development Medicago truncatula
shoot is a closed system of auxin signaling and transport in shade
majority of these show similar directional changes in response to both hormones Arabidopsis thaliana
small set shows opposite responses Arabidopsis thaliana
auxin regulates expression of GRETCHEN HAGEN3 (GH3)
difference in cytokinin (CK) content may explain rms buds on explants respond better to auxin than those on decapitated plants Pisum sativum
INDOLE-3-ACETIC ACID28 (IAA28, IAR2, AT5G25890) was found to be up-regulated in Pi/Suc-starved ark2-1/pub9-1 compared with Col-0 Arabidopsis thaliana
auxin reporters introduced into plants with mutations in (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) (GNR1, NIA1, NR1, AT1G77760) and (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) Arabidopsis thaliana
(HY5, TED 5, AT5G11260) directly adjusts genes involved in auxin signaling pathways Arabidopsis thaliana
OsHOX1 increased in OX-Ghd7 HJ19 plants Oryza sativa
DR5-GUS transgenic line crossed with (ATPDX1.1, PDX1.1, AT2G38230) and (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) shows GUS staining around leaf perimeter similar for wild-type, (ATPDX1.1, PDX1.1, AT2G38230) and (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) backgrounds Arabidopsis thaliana
DR5-GUS staining in root tip of (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) is significantly weaker compared with wild type Arabidopsis thaliana
signal from cotyledons driving hypocotyl growth might be auxin related Brassica rapa
auxin-mediated transcription in hypocotyl is dependent on mobile signal(s) produced in cotyledons, likely auxin Brassica rapa
auxin transport might be involved in regulation of auxin-responsive genes by shade Arabidopsis thaliana
(IAA18, AT1G51950) and (IAA28, IAR2, AT5G25890) mRNAs found to be expressed in vasculature tissue of mature Arabidopsis leaves Arabidopsis thaliana
transcripts in this overlap can be tested to ask about how they control root developmental responses to these two hormones Arabidopsis thaliana
exogenously applied IAA (indole-3-acetic acid) represses root growth Arabidopsis thaliana
auxin regulates expression of AUXIN/INDOLE-3-ACETIC ACID (AUX/IAA)
artificial auxin response element construct DR5 is highly active in pollen
auxin/IAA proteins are transcriptional repressors of genes associated with auxin responses Arabidopsis thaliana
DR5 pro : GUS expression after auxin treatment was reduced in NO-deficient mutant plants Arabidopsis thaliana
inhibitory effects of auxin on root growth were partially suppressed in NO-deficient plants Arabidopsis thaliana
5-nitro-2-(3-phenylpropylamino)-benzoic acid (NPPB) impairs principal auxin transport streams in roots, causing aberrant patterns of auxin signaling reporters Arabidopsis thaliana
(eL24y, RPL24, RPL24B, STV1, AT3G53020) (RPL4, uL4y, AT5G02870) and (RPL5, uL5M, ATMG00210) ribosomal proteins promote translation of MONOPTEROS/ (ARF5, IAA24, MP, AT1G19850) Arabidopsis thaliana
enhanced gravitropic response in ren1-D mutants implies ren1-D mutant affects auxin-regulated processes Oryza sativa
(ATMPK1, MPK1, AT1G10210) mutant displays increased sensitivity to all tested auxins Arabidopsis thaliana
axr2-1 mutation largely abolishes effect of exogenous auxin application on nuclear positioning Arabidopsis thaliana
arr branching phenotypes correlate with increases in stem auxin transport Arabidopsis thaliana
auxin metabolism in target site plays a role in regulation of elongation growth Arabidopsis thaliana
NPA did not affect responses of (IAA19, MSG2, AT3G15540) and (IAA29, AT4G32280) in VN
sHSP22 regulates auxin response Arabidopsis thaliana
sHSP22 OX lines exhibit involvement in high temperature-mediated hypocotyl elongation Arabidopsis thaliana
INDOLEACETIC ACID-INDUCED PROTEIN17 ( (AtIAA17, AXR3, IAA17, AT1G04250) HORVU3Hr1G031460) was upregulated in transgenic compared to null segregant genotypes Hordeum vulgare
(ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) NHP4 and (ARF11, ARF19, IAA22, AT1G19220) are believed to activate transcriptional module of auxin response
AVG and AgNO3 prevented asymmetric DR5rev::GFP expression on the lower side of the gravitropic root Arabidopsis thaliana
AtSAUR63 may affect auxin transport
Ca2+ (calcium ion) is involved in auxin action
high amounts of flavonoids may explain auxin accumulation at the base of the ccc stems
ROP signaling pathways is downstream of (ABP, ABP1, AT4G02980)
secreted (ABP, ABP1, AT4G02980) must interact with transmembrane protein
(AtUVR8, UVR8, AT5G63860) represses SAUR expression
OsGH3.1 expression was substantially inhibited by IAA treatment in NPB, siR109944 OE, and FBL55 OE plants Oryza sativa
F-box and AMN1 domains were conserved in FBL55 and Arabidopsis (AtTIR1, TIR1, AT3G62980) /AFB proteins Oryza sativa; Arabidopsis thaliana
(ARF5, IAA24, MP, AT1G19850) transcript is upregulated in OsMED14_1 RNAi plants Oryza sativa
reduced cellular auxin signaling level is independent of active auxin transport Arabidopsis thaliana
miR160-regulated C-ARFs repress blade expansion Solanum lycopersicum
rms-dependent changes in gene expression in buds occurred across all treatments Pisum sativum
Col-0 and other single mutants under Pi/Suc-starved condition display GUS staining Arabidopsis thaliana
mpk17-1 mutant displays hypersensitivity to long-chain auxins Arabidopsis thaliana
ubiquitin E3 ligase binds to auxin and promotes degradation of IAAs Arabidopsis thaliana
sHSP22 and (ABI1, AtABI1, AT4G26080) correlated to respond to auxin Arabidopsis thaliana
DR5rev promoter is auxin-sensitive Arabidopsis thaliana
DR5 pro:GUS expression in (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) mutants was reduced in roots of (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) mutants Arabidopsis thaliana
(AtTIR1, TIR1, AT3G62980) auxin receptor antagonist auxinole reduces hypocotyl growth in response to shade Brassica rapa
OsmiR396d could be regulated by auxin Oryza sativa
responses of (IAA19, MSG2, AT3G15540) and (IAA29, AT4G32280) to EOD-FR in presence of NPA had no inhibitory effect observed Arabidopsis thaliana
1,246 transcripts identified as DE in response to IAA Arabidopsis thaliana
(DSPTP1E, IBR5, AT2G04550) dephosphorylation of (ATMPK12, MAPK12, MPK12, AT2G46070) regulates auxin signaling Arabidopsis thaliana
(IAA28, IAR2, AT5G25890) was up-regulated in ark2-1/pub9-1 compared with wild type under phosphate starvation Arabidopsis thaliana
class III homeodomain leucine zipper (HD ZIP) gene REVOLUTA (AVB1, IFL, IFL1, REV, AT5G60690) is involved in auxin-mediated adaxial-abaxial patterning of plant leaves
rapid changes in auxin-dependent gene expression occurred in basipetal gradient along hypocotyl axis Brassica rapa
PINOID protein kinases (PIDs) phosphorylation of PIN proteins decreases auxin action
antimycin A (AA) treatment up-regulated (PBP1, AT5G54490) (PINOID BINDING PROTEIN 1) Arabidopsis thaliana
auxin signals has intermediate link to root growth
sites of auxin synthesis and responses did not necessarily match Arabidopsis thaliana
auxin (0.1 μM) is one of 12 specific treatments Arabidopsis thaliana
(AT5G35735) is auxin-induced gene
auxin signaling distal maximum and gradients is recognized to be fundamental to cell fate Arabidopsis thaliana
auxin gradients in Physcomitrella patens protonema have been reported previously Physcomitrella patens
high auxin content activates GH3 and AUX/IAA auxin-early responsive proteins
auxin responses are highly sensitive to trafficking perturbations Arabidopsis thaliana
conserved auxin down-regulated genes were related to auxin biosynthesis and response factors Oryza sativa
antimycin A (AA) treatment reduced transcript abundance of majority of auxin-responsive genes (38 of 49) Arabidopsis thaliana
translation of AUXIN RESPONSE FACTOR (ARF) genes via upstream open reading frames in 5′ leader sequences is mechanism of ribosomal protein function Arabidopsis thaliana
mutations in CONSTITUTIVE TRIPLE RESPONSE1 (AtCTR1, CTR1, SIS1, AT5G03730) increase auxin concentration in the root tip Arabidopsis thaliana
(ATPIN3, PIN3, AT1G70940) ,4,7 mutant buds remained inhibited for several days in presence of apical NAA Arabidopsis thaliana
sHSP22 functions in auxin response Arabidopsis thaliana
sHSP22 OX shows obvious changes in expression of auxin signaling marker genes (IAA3, SHY2, AT1G04240) and (IAA19, MSG2, AT3G15540) Arabidopsis thaliana
high (Spd + Spm)/Put ratio inhibits the expression of (IAA2, AT3G23030) Fragaria × ananassa
(ARF11, ARF19, IAA22, AT1G19220) participates in auxin signaling Arabidopsis thaliana
P (NPC3, AT3G03520) :GUS shows expression pattern resembling artificial auxin-activated DR5:GUS
(IAA11, AT4G28640) is regulated by 1-NAA treatment Arabidopsis thaliana
sequence homology and biochemical characteristics of AtPLAs suggest them as likely candidates to signal auxin
wild-type has higher DR5::GUS expression in root tips Arabidopsis thaliana
ROP signaling is downstream of (ABP, ABP1, AT4G02980)
(ARF3, ARL1, ATARL1, AT2G24765) (AtCRL1, CRL1, AT2G33590) expression is induced by auxin Oryza sativa
one auxin responsive element is required for (AtCRL1, CRL1, AT2G33590) expression in stem base Oryza sativa
polar transport of auxin regulates embryonic development
auxin reflux/fountain model describes mechanism of auxin transport at root tip
FBL55 encodes (AtTIR1, TIR1, AT3G62980) -like protein that is highly homologous to auxin receptor gene Oryza sativa
knockdown and overexpression of MADS29 transcription factor leads to auxin-related transcriptional disturbance Oryza sativa
DR5rev:3xVENUS-N7 signal showed symmetric distribution of DR5 expression in the lateral root cap (LRC) and epidermis Arabidopsis thaliana
SlLAM1 functions downstream of both E and SlMP Solanum lycopersicum
IAA-Asp conjugate level is reduced in GmPLDα1KD hairy roots compared to GUS hairy roots Glycine max
rapid changes in cytokinin (CK) status in stems are auxin dependent Pisum sativum
ark2-1/pub9-1 plants are unable to accumulate auxin in root tips under phosphate starvation Arabidopsis thaliana
E3 ligases function by modulating auxin accumulation and signaling under limited phosphate availability Arabidopsis thaliana
(GNR1, NIA1, NR1, AT1G77760) (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) triple mutant seedlings did not show significant reduction by exogenous auxin Arabidopsis thaliana
auxin as regulator in plant defense is consistent with MAF pattern for (AVB1, IFL, IFL1, REV, AT5G60690) variants Populus trichocarpa
DR5-GUS staining in root tip of (ATPDX1.1, PDX1.1, AT2G38230) is considerably stronger compared with wild type Arabidopsis thaliana
antimycin A (AA) treatment significantly down-regulated 14 of 17 differentially expressed auxin response factors (ARFs) Arabidopsis thaliana
1-naphthaleneacetic acid (1-NAA) treatment causes significant shift of nuclei toward outer lateral and apical membrane Arabidopsis thaliana
root surface alkalization is regulated by polar auxin transport (PAT)
ARFs promote the expression of auxin-responsive genes Arabidopsis thaliana
ROS represses auxin signaling Arabidopsis thaliana
SMALL AUXIN UP RNA (SAUR) expression can be induced within 2.5 min after auxin treatment
rescue of lateral root (LR) defect in ark2-1/pub9-1 by auxin supplementation suggests (ARK2, AtARK2, RK2, AT1G65800) and (ATPUB9, PUB9, AT3G07360) control accumulation of auxin under phosphate-starved conditions Arabidopsis thaliana
spotlight FR irradiation localized to the cotyledons induces expression of an auxin-dependent gene in the hypocotyl Arabidopsis thaliana
H2O2 (hydrogen peroxide) treatment or overexpression of Arabidopsis NPK1-like protein kinase blocks induction of auxin-responsive promoters Arabidopsis thaliana
1-NAA treatment nuclear position phenotype resembles nuclear position phenotype of (AtCTR1, CTR1, SIS1, AT5G03730) btk Arabidopsis thaliana
six typical auxin-responsive genes ( (AXR5, IAA1, AT4G14560) (IAA30, AT3G62100) (IAA29, AT4G32280) (GH3.3, AT2G23170) (IAA19, MSG2, AT3G15540) and (IAA2, AT3G23030) ) were examined for response to local FR irradiation Arabidopsis thaliana
zmpgp1-1 mutant seedlings supplied with 40 nM NAA showed 42% reduction in primary root elongation Zea mays
zmpgp1 mutants have increased auxin responses Zea mays
PABA alters expression pattern of pARF7::ARF7-GFP Arabidopsis thaliana
AUXIN RESPONSE FACTOR (ARF) family includes (ARF16, AT4G30080)
DR5 pro:GUS expression in (GNR1, NIA1, NR1, AT1G77760) (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) mutants was reduced in roots of (GNR1, NIA1, NR1, AT1G77760) (ATNR2, B29, CHL3, NIA2, NIA2-1, NR, NR2, AT1G37130) (ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) mutants Arabidopsis thaliana
DR5 expression in (ATP8, AtRCD1, CEO, CEO1, RCD1, RIMB1, AT1G32230) (SRO1, AT2G35510) plants auxin response maxima are impaired to some extent auxin response maxima Arabidopsis thaliana
(ATNOA1, ATNOS1, NOA1, NOS1, RIF1, SVR10, AT3G47450) mutation seems to impair auxin sensitivity Arabidopsis thaliana
removal of the cotyledons prior to simulated shade results in loss of auxin-dependent gene induction Brassica rapa
antimycin A (AA) treatment affected auxin response factors (ARFs) Arabidopsis thaliana
Aux/IAA degradation facilitates activation of auxin signaling
apical NAA (1-naphthalene acetic acid) delays bud activation Arabidopsis thaliana
maize DR5rev:RFP marker (auxin response reporter) line examined local auxin accumulation under Al stress Zea mays
zmpgp1 mutant has increased free IAA levels and DR5rev:RFP signal in root tips Zea mays
comparison with the IAA data set led to further narrowing of genes of interest specifically for ethylene and auxin cross talk in roots Arabidopsis thaliana
low levels of free IAA (maintained by Gretchen Hagen3 [GH3]) are needed to allow berry ripening Vitis vinifera
NAA pretreatment abolished the down-regulation of TRANSPORT INHIBITOR RESPONSE1 (AtTIR1, TIR1, AT3G62980) auxin receptor Arabidopsis thaliana
(eL24y, RPL24, RPL24B, STV1, AT3G53020) (RPL4, uL4y, AT5G02870) and (RPL5, uL5M, ATMG00210) ribosomal proteins promote translation of AUXIN RESPONSE FACTOR (ARF) genes ETTIN (ARF3, ETT, AT2G33860) Arabidopsis thaliana
reductions in auxin levels cause increasing disruptions to physiological responses
mutation in auxin signaling had only a limited impact on proportion of the three lateral root types
auxin signaling pathway is unaffected in OsFBK1 transgenics Oryza sativa
DUBs were shown to be involved in auxin signaling Arabidopsis thaliana
laboratory used same experimental and statistical methods to examine kinetics of transcriptional responses of Arabidopsis roots to IAA Arabidopsis thaliana
sHSP22 overexpression plants increases sensitivity in root growth to auxin transport inhibitor naphthyl phthalamic acid (NPA) Arabidopsis thaliana
(SAUR61, AT1G29420) to (SAUR68, AT1G29490) and (SAUR75, AT5G27780) are induced by auxin Arabidopsis thaliana
chy1-10 displays IBA resistance Arabidopsis thaliana
SCF (COI1, AT2G39940) ubiquitin-ligase complex is similar to auxin-TIR1-AUX/IAA ubiquitin-ligase complex
(ARAC4, ATRAC4, ATROP2, ROP2, AT1G20090) and (RIC4, AT5G16490) signaling promotes actin-dependent localized accumulation of auxin efflux carrier (ATPIN1, PIN1, AT1G73590) Arabidopsis thaliana
ark2-1/pub9-1 primary roots (PRs) under Pi/Suc-starved condition do not exhibit GUS staining Arabidopsis thaliana
proper polar auxin transport is necessary for degradation of DELLA and derepression of growth Arabidopsis thaliana
GH3-5 marker gene follows similar trend in (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) mutant background Arabidopsis thaliana
(AFB1, ATGRH1, GRH1, AT4G03190) auxin receptor gene up-regulation in hypocotyl tissue suggests increased sensitivity of hypocotyl to auxin in shade Arabidopsis thaliana
antimycin A (AA) treatment down-regulated TRANSPORT INHIBITOR RESPONSE1 (AtTIR1, TIR1, AT3G62980) auxin receptor Arabidopsis thaliana
rao3/big and rao6/ (AS1, ATMYB91, ATPHAN, LL2, MYB91, AT2G37630) mutants had significantly lower GUS staining patterns Arabidopsis thaliana
H2O2 (hydrogen peroxide) can block the action of auxin Arabidopsis thaliana
indole-3-acetic acid (IAA) treatment strongly induces OsCKX4 expression in roots Oryza sativa
zmpgp1 mutant with or without Al stress treatment expression of ZmIAA2, ZmIAA10, ZmIAA21, and ZmGH3 in roots was significantly higher than that in (B73, CHL6, CNX, CNX1, SIR4, AT5G20990) Zea mays
DR5rev expression is restricted to quiescent center and columella cells Arabidopsis thaliana
PLETHORA1 (AtPLT1, PLT1, AT3G20840) is essential for meristem cell niche organization in response to auxin signals Arabidopsis thaliana
(VUP1, AT3G21710) OX down-regulated genes include auxin-regulated genes Arabidopsis thaliana
expression of auxin transport genes is strongly associated with auxin response Pisum sativum
auxin-overproducing mutants show increased nitric oxide (NO) production
(ATPDX1.1, PDX1.1, AT2G38230) mutant implies different mechanism to reported classical auxin-accumulating mutants Arabidopsis thaliana
BrGH3-5, BrIAA19, and BrIAA2 were all induced in shade-treated hypocotyl segments with greatest induction in apical segment Brassica rapa
R light irradiation of the internode may alter auxin transport Sinapis alba
auxin response was more prominent in vasculature Arabidopsis thaliana
(IAA30, AT3G62100) (Group 1; VS) and (IAA19, MSG2, AT3G15540) (Group 5; VN and VS) increased toward base Arabidopsis thaliana
SAUR proteins regulate auxin transport
stem transcript and cytokinin (CK) changes were largely associated with auxin response Pisum sativum
buds on isolated node explants of SL-defective rms pea mutants have normal auxin response unlike Arabidopsis max mutants Pisum sativum; Arabidopsis thaliana
leaf growth responses are auxin dependent Arabidopsis thaliana
10-d-old DR5::uidA-expressing Col-0 seedlings grown in −Pi/−Suc medium with 1 mm 3-MA shows reduced GUS staining in primary and lateral root (LR) tips Arabidopsis thaliana
auxin response DR5 pro : GUS reporter line was crossed with mutant plants Arabidopsis thaliana
ROS treatment caused auxin signaling to be transiently suppressed Arabidopsis thaliana
(FOC, MIR160, MIR160A, AT2G39175) may positively regulate rice immunity by silencing indole-3-acetic acid (IAA) signaling Oryza sativa
ren1-D mutants show significant alteration in expression of auxin-related genes Oryza sativa
mpk17-1 mutant is hypersensitive to inactive long-chain auxins Arabidopsis thaliana
zmpgp1 mutant is hyposensitive to auxin Zea mays
auxin biosynthesis and signaling-related genes are altered under brassinolide (BL) treatment
PK2 expression in stems showed recovery if auxin was supplied Pisum sativum
altered expression pattern of auxin signaling and transport genes indicative of requirement of ARK2-PUB9 module in maintaining expression of PIN transport proteins and (IAA28, IAR2, AT5G25890) repressor under nutrient-starved conditions Arabidopsis thaliana
suppression of axillary bud outgrowth by auxin and repressed leaf growth could mediate resistance to rust fungus Populus trichocarpa
(AVB1, IFL, IFL1, REV, AT5G60690) is implicated in polar auxin transport Arabidopsis thaliana
(ATPDX1.1, PDX1.1, AT2G38230) mutant lacks similar shoot phenotype to auxin-accumulating mutants Arabidopsis thaliana
Inhibition of auxin transport or activity suppresses GOB overexpression phenotype Solanum lycopersicum
free IAA levels in hypocotyl after 2 h of low R : FR shade did not show detectable increase Brassica rapa
PINFORMED2 is involved in auxin transport Arabidopsis thaliana
related auxin compounds produce auxin-like responses
auxin acts as intraorgan signaling factor Arabidopsis thaliana
Al stress induces local up-regulation of auxin response in the root TZ Arabidopsis thaliana
OsFBK1 overexpression line is less sensitive to root inhibition by auxin Oryza sativa
enhanced auxin signaling leads to increased sensitivity in root growth to NPA Arabidopsis thaliana
Rice Morphology Determinant (RMD) is key regulator of auxin-actin self-organizing regulatory loop Oryza sativa
Arabidopsis Receptor Kinase2 (ARK2, AtARK2, RK2, AT1G65800) and Arabidopsis U box/armadillo repeat-containing E3 ubiquitin ligase9 (ATPUB9, PUB9, AT3G07360) signaling module is required for auxin-mediated lateral root (LR) development under phosphate-starved conditions Arabidopsis thaliana
absence of GUS staining in ark2-1/pub9-1 PR tips under nutrient-starved conditions indicates severely reduced levels of auxin in ark2-1/pub9-1 PR tips under nutrient-starved conditions Arabidopsis thaliana
reduction in auxin accumulation in lateral roots after 3-MA treatment suggests role for autophagy in controlling auxin accumulation Arabidopsis thaliana
auxin-signaling gradient is inhibited by 5-nitro-2-(3-phenylpropylamino)-benzoic acid (NPPB) Arabidopsis thaliana
development of the deeply serrated leaf margin of mtphan mutant is dependent on auxin activity maxima mediated by the auxin efflux protein MtPIN10 Medicago truncatula
low R : FR shade leads to PIF-dependent up-regulation of (AFB1, ATGRH1, GRH1, AT4G03190) auxin receptor gene Arabidopsis thaliana
auxin is known to control root-hair elongation
mpk17-1 mutant displays wild-type sensitivity to short-chain synthetic auxin 2,4-dichlorophenoxyacetic acid (2,4-D) in root elongation assays Arabidopsis thaliana
OsFBK1 knockdown transgenics displayed greater root inhibition in presence of IAA Oryza sativa
auxin (IAA) has different effects on root development than ethylene Arabidopsis thaliana
ethylene requires (ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) and (ARF11, ARF19, IAA22, AT1G19220) transcription factors Arabidopsis thaliana
(CAMTA1, EICBP.B, AT5G09410) is involved in auxin signaling
1-NAA treatment induces GUS activity in primary and lateral roots Arabidopsis thaliana
1-NAA treatment induces GUS activity in root–shoot junction of hypocotyls Arabidopsis thaliana
auxin application evokes reduced primary root growth
AUXIN BINDING PROTEIN 1 (ABP, ABP1, AT4G02980) modulates non-transcriptional auxin responses
rapid cellular auxin effects seem unlikely to be transcriptionally regulated transcriptional regulation
(ARAC4, ATRAC4, ATROP2, ROP2, AT1G20090) and (ARAC5, ATGP3, ATROP4, ROP4, AT1G75840) are involved in sensing and signaling of auxin Arabidopsis thaliana
transmembrane protein transmits auxin signal to ROP
SCF (AtTIR1, TIR1, AT3G62980) activity targets for ubiquitin-mediated proteolysis auxin/indoleacetic acid (Aux/IAA) family Arabidopsis thaliana
GRETCHEN HAGEN 3 (GH3) proteins modulate auxin homeostasis through conjugating excess auxins to amino acids and sugar Oryza sativa
DII signal in the aux1-21 mutant showed that ammonium (NH4+) and low pH did not affect nuclear DII signal in the lateral root cap (LRC) and epidermis Arabidopsis thaliana
auxin signaling inhibitors suppresses root spiraling Oryza sativa
(AtTIR1, TIR1, AT3G62980) /AFBs function in auxin perception Arabidopsis thaliana
boron may have roles in auxin transport
a group of genes including PsAUX1 and PK2 show strong rms-dependent expression changes in buds bud tissues Pisum sativum
nitric oxide (NO) has direct influence on auxin perception and signal transduction Arabidopsis thaliana
auxin up-regulates NITRATE TRANSPORTER1.1 (AtNPF6.3, ATNRT1, B-1, CHL1, CHL1-1, NPF6.3, NRT1, NRT1.1, AT1G12110) gene expression Arabidopsis thaliana
indole-3-acetic acid (IAA)-induced expression of auxin-regulated genes was inhibited by oligogalacturonides (OGs) and elf18 Arabidopsis thaliana
AUXIN-RESISTANT1 is involved in auxin transport Arabidopsis thaliana
(AtROS1, DML1, ROS1, AT2G36490) DEL TFs have several targets of regulation including genes involved in auxin transport Solanum lycopersicum
genetic interaction between GRF-GIF and (ABR, PID, AT2G34650) provides substantial evidence that action mode of GRF-GIF duo may be associated with that of auxin Arabidopsis thaliana
mutation in auxin signaling controls formation of nodal roots
sHSP22 is involved in auxin-regulated hypocotyl elongation at high temperature Arabidopsis thaliana
sHSP22-GUS expression in abi1-3 seedlings decreased and increased much less upon IAA treatment compared with Col-0 seedlings Arabidopsis thaliana
Macromitrium japonicum dwarf males grew in culture on medium containing auxin Macromitrium japonicum
rapid growth responses are based on auxin signalling mechanisms different from canonical pathway
auxin/ARF/LBD regulatory module mediates callus formation and lateral root formation
gibberellin (GA) may activate auxin response to promote Pisum sativum
flavanols could stabilize PIN dimers Arabidopsis thaliana
(AtNPC4, NPC4, AT3G03530) transcription levels increase with increasing duration of auxin treatment Arabidopsis thaliana
system allowing conditional repression of Auxin binding protein 1 (ABP, ABP1, AT4G02980) expression provided opportunity to investigate post-embryonic function of Auxin binding protein 1 (ABP, ABP1, AT4G02980)
conserved domain AMN1 shared high homology FBL55 and (AtTIR1, TIR1, AT3G62980) /AFB proteins Oryza sativa
(ANAC018, ATNAM, NAM, NARS2, AT1G52880) /CUC/ (EEP1, MIR164, MIR164C, AT5G27807) module modulates auxin response
auxin maximum patterning occurs prior to leaflet initiation
induction of (ATXTH19, XTH19, AT4G30290) by auxin may not be via (ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) Arabidopsis thaliana
REVERSAL OF SAV 2 (GH3.17, VAS2, AT1G28130) is involved in cell proliferation and expansion Camelina sativa
auxin reversal of gene expression changes is independent of strigolactone (SL) Pisum sativum
rescue of lateral root phenotype by exogenous auxin in ark2-1/pub9-1 seedlings is indicative of ARK2-PUB9 module regulating auxin accumulation in root tips during phosphate starvation Arabidopsis thaliana
exogenous auxins (NAA and 2,4-D) treatment led to significant increase in GUS activity irrespective of exogenous antimycin A treatment Arabidopsis thaliana
pinoid-3 (pid-3) mutation aggravated grf and (AN3, ATGIF1, GIF, GIF1, AT5G28640) phenotypes Arabidopsis thaliana
(AXR5, IAA1, AT4G14560) and (GH3.3, AT2G23170) had experimental error too large to draw clear conclusion for Arabidopsis thaliana
higher auxin accumulation induces expression of ZmMATE1 Zea mays
two auxin-related genes ( (IAA19, MSG2, AT3G15540) and (SAUR29, AT3G03820) ) were found among positive biomarkers of first and second transitions Vitis vinifera
PABA requires (ARF7, BIP, IAA21, IAA23, IAA25, MSG1, NPH4, TIR5, AT5G20730) and (ARF11, ARF19, IAA22, AT1G19220) transcription factors Arabidopsis thaliana
auxin regulates expression of SMALL AUXIN UP RNA (SAUR)
equivalent buds on decapitated whole pea plants are minimally inhibited by exogenous auxin Pisum sativum
DR5rev : GFP auxin marker detects auxin response signal distribution in regenerating shoots Arabidopsis thaliana
DR5:GUS auxin reporter exhibits asymmetric expression maximal at meristems during Arabidopsis seed germination Arabidopsis thaliana
sHSP22 OX lines exhibit auxin-associated phenotypes Arabidopsis thaliana
(NPC3, AT3G03520) and (AtNPC4, NPC4, AT3G03530) knockouts show slightly reduced primary root lengths and lateral root densities compared to WT in 1-NAA Arabidopsis thaliana
auxin may regulate by modulating ubiquitin–proteasome activity
clathrin-mediated endocytosis is regulated by (ABP, ABP1, AT4G02980)
two members of the (AtTIR1, TIR1, AT3G62980) /AFB family serve as negative regulators of auxin signaling
OsCAND1 is controller involved in auxin signaling regulating G2/M transition for meristem cells Oryza sativa
exogenous auxins (NAA, 2,4-D, IAA) show stimulatory effects on crown root emergence in the Oscand1 mutant
Auxin-responsive protein, putative (SAUR12, AT2G21220) is ORS1-dependent up-regulated gene Arabidopsis thaliana
FBL55 OE plants show differential expression of auxin signalling pathway-related genes Oryza sativa
auxin synthesis-related and signal-related genes show different expression patterns when hosts defend against different pathogens
FBL55 protein has high identity with rice (AtTIR1, TIR1, AT3G62980) (AFB2, AT3G26810) and (AFB4, AT4G24390) proteins Oryza sativa
miR160-regulated C-ARFs repress auxin response Solanum lycopersicum
auxin response in sllam1-1 was only detected in tips of leaf primordia but not in margins of P3 and P4 Solanum lycopersicum
AtDREB2A directly regulates (IAA19, MSG2, AT3G15540) expression Arabidopsis thaliana
high auxin concentration in (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutant does not result in typical high-auxin morphology and transcriptome phenotype
gain-of-regulation genes included auxin-responsive genes
(AtNPC4, NPC4, AT3G03530) knockout shows no decrease in (IAA20, AT2G46990) expression
AUXIN BINDING PROTEIN 1 (ABP, ABP1, AT4G02980) has role in regulation of auxin-induced gene expression
auxin signaling is crucial to maintain meristem activity
SMALL AUXIN UPREGULATED RNA 22 (SAUR22, AT5G18050) expression is greatly upregulated in gi-2 mutants at warm temperatures Arabidopsis thaliana
(IAA14, SLR, AT4G14550) acts as key regulator in auxin-regulated lateral root formation Oryza sativa
OsYUC4 expression was induced in NPB and siR109944 OE lines after auxin treatment Oryza sativa
auxin promotes leaflet initiation Solanum lycopersicum
(AtNPC4, NPC4, AT3G03530) knockout shows no decrease in (IAA19, MSG2, AT3G15540) expression
auxin application triggers rapid phospholipase A (PLA) activation
AECP (ATPIN7, PIN7, AT1G23080) shows five- to six-fold induction in expression in u-ATP9 transgenic lines
AtYUC1 expression was examined in Col-0 wild-type and siR109944 OE lines Arabidopsis thaliana
DR5:GFP; fer-4 roots exhibit asymmetric distribution of GFP signals Arabidopsis thaliana
TaARF25 forms heterodimers with TaIAA21 Triticum aestivum
1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4 (ACC4, ACS4, ATACS4, AT2G22810) is known auxin responsive gene Arabidopsis thaliana
genes annotated as 'response to auxin stimulus' was found as overrepresented category at 22°C Arabidopsis thaliana
axr1-3 mutant is insensitive to Heatin
auxin produced in V3 lateral branches may cause bud dormancy in V2 Arabis alpina
auxin levels activates Rho-like small GTPase 2 (ARAC4, ATRAC4, ATROP2, ROP2, AT1G20090)
CLE-CLV1 signaling may interact with auxin Arabidopsis thaliana
interactions between (ARF3, ETT, AT2G33860) and other transcription factors and co-repressors are sensitive to direct binding of (ARF3, ETT, AT2G33860) to auxin Arabidopsis thaliana
pattern of auxin flow interweaves with root growth Arabidopsis thaliana
auxin signaling is found to be important for fatty acid metabolism Brassica napus
superroot2 (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutant exhibits increased number of lateral roots Arabidopsis thaliana
(IAA19, MSG2, AT3G15540) is up-regulated in (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) knockout mutant Arabidopsis thaliana
(AtPLAIVA, PLA IVA, PLP1, AT4G37070) mutant genotype is reminiscent of auxin signaling mutations in IAA proteins Arabidopsis thaliana
(CBP1, MEE14, AT2G15890) alone is unlikely to transmit auxin signal across plasma membrane (PM)
flavonoid modulation modulates auxin transport processes
OsYUC4 expression showed no change in FBL55 OE plants after auxin treatment Oryza sativa
AtGH3.1 and AtGH3.5 expression was noticeably increased in siR109944 OE line compared with Col-0 wild-type Arabidopsis thaliana
leaflet initiation requires spatially distributed auxin response Solanum lycopersicum
polar auxin transport establishes auxin response maxima in the leaf margin
(FER, AT3G51550) loss-of-function affects auxin responses in root tips Arabidopsis thaliana
cullin1 mutants discovered hyposensitive phenotype to auxin treatment Arabidopsis thaliana
(IAA11, AT4G28640) responsivity to 1-NAA is not abolished in npc3-1 mutant Arabidopsis thaliana
AtplaIVA-2 mutant roots respond to auxin treatment to the same extent as wild-type roots Arabidopsis thaliana
pPLA inhibitors inhibit transcription of several Aux/IAA genes Arabidopsis thaliana
degradation of the AUX/IAAs permits ARF-dependent gene expression
auxin-induced signaling pathways downstream of AUXIN BINDING PROTEIN 1 (ABP, ABP1, AT4G02980) provide evidence for ABP1-mediated polar cell expansion
auxin signal transmission from (ABP, ABP1, AT4G02980) to ROP is missing from hypothesis for (ABP, ABP1, AT4G02980) as auxin receptor
quadruple mutants of Arabidopsis 5PTase family members display altered auxin distribution under Ins(1,4,5)P3 treatment Arabidopsis thaliana
localized auxin maxima regulates tropic growth responses
auxin inhibits (PIN5, AT5G16530) expression
OsMED14_1 RNAi plants exhibited compromised expression of (ARF4, AT5G60450) Oryza sativa
ZmDREB2A upregulates ZmIAA17 expression Zea mays
SMALL AUXIN UP RNA 71 (SAUR71, AT1G56150) is involved in cell proliferation and expansion Camelina sativa
(AXR5, IAA1, AT4G14560) is up-regulated in (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) knockout mutant Arabidopsis thaliana
(IAA20, AT2G46990) expression increase is lower in response to 1-NAA treatment in npc3-1 mutant Arabidopsis thaliana
pPLAs have individual roles at the interface between phosphate deficiency and auxin signaling Arabidopsis thaliana
other members of the AtPLA family may be redundant with (AtPLAIVB, PLA IVB, PLP5, AT4G37060) Arabidopsis thaliana
IAA treatment induces MAIF1 expression Oryza sativa
endogenous auxin signal could make a relevant response to exogenous IAA treatment Oryza sativa
osnam-1 mutant has not significantly altered auxin-related gene expression Oryza sativa
(AGG2, AtGG2, AT3G22942) is identified as negative regulator of auxin-induced lateral root formation Arabidopsis thaliana
auxin treatment increases GUS activity in shoots Arabidopsis thaliana
seedlings treated with 1-NAA (auxin) were grown for 7 d on half-strength AM medium containing 1.25 mM KH2PO4 Arabidopsis thaliana
auxin sensitivity of root growth was not changed in knockout lines Arabidopsis thaliana
auxin application less strongly retarded root elongation in (EAL1, SGR7, SHR, AT4G37650) seedlings