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auxin biosynthesis

15287 relationships annotated with this phrase. Showing first 500 of 15287.
Source entity Relationship Target entity Species
apical stem cells show the highest expression of PpTAR genes Physcomitrium patens
(AtYUC4, YUC4, AT5G11320) play important roles in adventitious root generation Arabidopsis thaliana
flavin monooxygenase-like enzyme (YUCCA) plays critical role in root development
(YUC, YUC1, AT4G32540) (AtYUC4, YUC4, AT5G11320) (YUC10, AT1G48910) (YUC11, AT1G21430) quadruple mutants failed to develop root meristem Arabidopsis thaliana
(AtYUC2, YUC2, AT4G13260) play important roles in adventitious root generation Arabidopsis thaliana
PpTAR gene expression indicates biosynthesis of IPyA Physcomitrium patens
(AtNIT2, NIT2, AT3G44300) and (AtNIT4, NIT4, AT5G22300) are involved in auxin biosynthesis Arabidopsis thaliana
simultaneous inactivation of (YUC3, AT1G04610) (SUPER1, YUC5, AT5G43890) (YUC7, AT2G33230) (CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) led to short roots Arabidopsis thaliana
IAA precursors (tryptophan and indole-3-glycerol phosphate) are synthesized in chloroplast
dissociation of OsFIP37 caused by loss of function of OsFAP1 downregulated OsYUCCA3 expression Oryza sativa
Thallus apex-generated auxin is synthesized by IPyA pathway Marchantia polymorpha
YUCCA (YUC, YUC1, AT4G32540) auxin biosynthetic enzyme was downregulated in mutant plants at 38 d Setaria viridis
narrow and curly leaf (nal7) mutant is due to mutation in (CKRC2, YUC8, YUCCA8, AT4G28720) Oryza sativa
pAct-OsYUCCA1 antisense plants inhibit root elongation Oryza sativa
YUCCA FLAVIN MONOOXYGENASE-LIKE 1 (YUC, YUC1, AT4G32540) play important roles in adventitious root generation Arabidopsis thaliana
pAct-OsYUCCA1 antisense plants inhibit root formation Oryza sativa
apical stem cell does not appear affected in auxin biosynthesis mutants Physcomitrella patens
final IAA production is thought to occur in cytosol
overexpression of genes involved in auxin biosynthesis led to altered number of lateral roots Arabidopsis thaliana
(AtTAR2, TAR2, AT4G24670) is significantly up-regulated in combination mutants Arabidopsis thaliana
(YUC10, AT1G48910) was not up-regulated in mutants Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) increased in MN samples Arabidopsis thaliana
(PIF7, AT5G61270) is responsible for shade-induced (YUC, YUC1, AT4G32540) expression Arabidopsis thaliana
ethylene induces (TAR1, AT1G23320)
apical cell and immediate derivatives are site of auxin biosynthesis Physcomitrella patens; Marchantia polymorpha
antibody used for auxin detection is unlikely to label tryptophan
yuc1D mutant has elevated free IAA levels Arabidopsis thaliana
IBA and 2,4-DB require functional peroxisomes for conversion to active auxins Arabidopsis thaliana
PABA may activate other components of the auxin biosynthesis pathway Arabidopsis thaliana
mutation of genes involved in auxin biosynthesis led to altered number of lateral roots Arabidopsis thaliana
(TRP, AT3G56390) AMINOTRANSFERASE OF ARABIDOPSIS (TAA) family of aminotransferases is key enzyme in Trp-dependent auxin biosynthesis Arabidopsis thaliana
genes implicated in de novo auxin (IAA) biosynthesis are highly expressed during 17–21 DAF Brassica napus
auxin is synthesized from tryptophan
(TAR1, AT1G23320) expression is decreased in mn1 mutant endosperm Zea mays
YUCCA (YUC, YUC1, AT4G32540) genes is affected in OsMED14_1 RNAi plants Oryza sativa
YUCCA (YUC, YUC1, AT4G32540) genes catalyze conversion of tryptamine to N-hydroxytryptamine
YUCCA (YUC, YUC1, AT4G32540) family of flavin-containing mono-oxygenases is key enzyme in Trp-dependent auxin biosynthesis Arabidopsis thaliana
ethylene induces WEAK ETHYLENE INSENSITIVE2 (AMT1, ASA1, JDL1, TRP5, WEI2, AT5G05730) ANTHRANILATE SYNTHASE α1
PABA involves (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) Arabidopsis thaliana
antimycin A (AA) treatment did not transcriptionally modulate YUCCA (flavin monooxygenases; (AtYUC2, YUC2, AT4G13260) ) Arabidopsis thaliana
FaSAMDC downregulation promoted IAA accumulation Fragaria × ananassa
(CKRC2, YUC8, YUCCA8, AT4G28720) expression is greatly upregulated in gi-2 mutants at warm temperatures Arabidopsis thaliana
(AtYUC4, YUC4, AT5G11320) is upregulated in OsMED14_1 RNAi plants Oryza sativa
auxin biosynthetic genes including TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) YUCCA2 (AtYUC2, YUC2, AT4G13260) (AtYUC4, YUC4, AT5G11320) (SUPER1, YUC5, AT5G43890) and (YUC9, YUCCA9, AT1G04180) are significantly down-regulated in (DCC1, AT5G50100) mutant Arabidopsis thaliana
L-kynurenine can be competitively inhibited by activity of (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and its homologs, TARs Arabidopsis thaliana
aminotransferases and decarboxylases require pyridoxal-5'-phosphate (PLP) Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) expression responded preferentially in MN samples Arabidopsis thaliana
ROS repressed auxin biosynthesis genes ( (AtYUC4, YUC4, AT5G11320) and (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) )
auxin levels in (ATPDX1.1, PDX1.1, AT2G38230) mutant are substantially increased (ATPDX1.1, PDX1.1, AT2G38230) mutant Arabidopsis thaliana
de novo biosynthesis is more important for IAA maintenance in the growing tissue Arabidopsis thaliana
(YUC3, AT1G04610) and (AtYUC4, YUC4, AT5G11320) increased in VN and VS samples, respectively Arabidopsis thaliana
low auxin levels activates a specific set of auxin-biosynthetic genes
IAA biosynthesis pathway may not be differentially regulated in HFL transgenic rice Oryza sativa
FaSAMDC upregulation inhibited IAA accumulation Fragaria × ananassa
shade stimulus promotes expression of (YUC, YUC1, AT4G32540) genes Arabidopsis thaliana
(AtROS1, DML1, ROS1, AT2G36490) DEL TFs have several targets of regulation including genes involved in auxin biosynthesis Solanum lycopersicum
position within the cotyledon might be important for (CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) expression Arabidopsis thaliana
(AtPIF4, PIF4, SRL2, AT2G43010) is responsible for shade-induced (YUC, YUC1, AT4G32540) expression Arabidopsis thaliana
PABA and ACC regulate tissue-specific stimulation of (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) in the TZ-EZ on the concave side of the curving root Arabidopsis thaliana
vitamin B6 deficiency affects auxin biosynthesis Arabidopsis thaliana
YUCCA family of flavin monooxygenases catalyze rate-limiting step in auxin biosynthesis Arabidopsis thaliana
Arabidopsis genome encodes 11 YUCCA genes Arabidopsis thaliana
OsYUC1 overexpression increased IAA levels Oryza sativa
Bacillus velezensis SQR9 can produce indole-3-acetic acid (IAA) Bacillus velezensis
mn1 mutant endosperm shows lowest IAA levels at 28 DAP Zea mays
reduced (TAR1, AT1G23320) levels in mn1 endosperm at 20 and 28 DAP is concordant with reduced IAA levels Zea mays
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) encodes (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1)
combination mutants show particularly increased expression in YUCCA / Tryptophan Aminotransferase of Arabidopsis1 pathway Arabidopsis thaliana
ethylene specifically affects de novo auxin biosynthesis pathway Arabidopsis thaliana
tryptophan (Trp) is precursor of indole-3-acetic acid (IAA) higher plants
auxin is synthesized mainly in young leaves
YUCCA gene encodes flavin monooxygenase-like protein Arabidopsis thaliana
YUCCA3 is close homolog of (CKRC2, YUC8, YUCCA8, AT4G28720) Arabidopsis thaliana
indole-3-acetic acid (IAA) in developing maize seeds appears to be synthesized in situ developing seeds Zea mays
YUCCA5 is close homolog of (CKRC2, YUC8, YUCCA8, AT4G28720) Arabidopsis thaliana
(AtYUC6, YUC6, AT5G25620) is upregulated in OsMED14_1 RNAi plants Oryza sativa
PHYTOCHROME INTERACTING FACTOR 4 (AtPIF4, PIF4, SRL2, AT2G43010) regulates expression of key auxin biosynthetic genes Arabidopsis thaliana
Heatin inhibits NIT1-subfamily enzymatic activity Arabidopsis thaliana
in vivo IAN substrate accumulation prompted NIT1-subfamily in vitro activity assays Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) overexpression confirmed by discovery of T-DNA insertion site in atbs4-D Arabidopsis thaliana
large fraction of dek mutants do not show alterations in auxin levels Zea mays
(TAR1, AT1G23320) expression is highest at 12 DAP in both genotypes Zea mays
trp-independent (T-I) pathway shows no indication of developing kernels of maize Zea mays
such mutants with altered indole-3-acetic acid (IAA) content are not described in maize Zea mays
Mn1 endosperm reaches highest IAA level at 28 DAP Zea mays
IAA levels shows negative correlation with (TAR1, AT1G23320) RNA in mn1 endosperm at 12 and 16 DAP Zea mays
auxins, especially IAA trigger biosynthesis of auxins Citrus sinensis; Citrus paradisi
Heatin acts in additive way to supra-optimal HNA concentrations
(AAO1, AO1, AOalpha, AT-AO1, ATAO, AtAO1, AT5G20960) has been implicated in IAA biosynthesis
TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) is involved in production of auxin
YUCCA6 is HYPERTALL1 Arabidopsis thaliana
mn1 mutant endosperm shows decreasing trend in IAA levels Zea mays
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1) is tryptophan aminotransferase
glutamine implicates in the regulation of free IAA in leaves Populus sp.
(YUC3, AT1G04610) encodes YUCCA3 Arabidopsis thaliana
COMATOSE (ABCD1, ACN2, AtABCD1, CTS, PED3, PXA1, AT4G39850) might import precursors of auxin Arabidopsis thaliana
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) mutants show reduced levels of indole-3-acetic acid (IAA) in leaves Arabidopsis thaliana
(YUC, YUC1, AT4G32540) (AtYUC4, YUC4, AT5G11320) double mutants are defective in auxin biosynthesis Arabidopsis thaliana
thermoactivated (AtPIF4, PIF4, SRL2, AT2G43010) induces (CKRC2, YUC8, YUCCA8, AT4G28720) transcription
fsh suppressor mutation does not significantly change IAA levels
overexpression of YUCCA3, 4, 5, or 6 results in similar morphological phenotypes Arabidopsis thaliana
12 DAP stage in maize endosperm is associated with first high peak of biphasic IAA accumulation Zea mays
peroxisomal enzymes are required for IBA-to-IAA conversion
auxin biosynthesis gene (YUC, YUC1, AT4G32540) was substantially inhibited in rice and Arabidopsis that overexpressed siR109944 Arabidopsis thaliana; Oryza sativa
free IAA content was slightly increased in FBL55 OE rice compared with NPB Oryza sativa
flavin monooxygenase-like protein catalyzes hydroxylation of tryptamine Arabidopsis thaliana
YUCCA genes function in tryptophan-dependent auxin biosynthesis Zea mays
IAA synthesis occurs in two steps
PHYTOCHROME INTERACTING FACTOR 4 (AtPIF4, PIF4, SRL2, AT2G43010) and (PIF7, AT5G61270) bind and activate promoters of (CYP79B3, AT2G22330) Arabidopsis thaliana
Heatin inhibition of NIT1-subfamily enzyme activity is not substrate specific
ZmGID2IR showed down-regulation of genes involved in auxin biosynthesis
turnover of substrate 3-phenyl-propionitrile (3-PPN) was reduced in presence of Heatin
NIT1-subfamily–dependent pathway is Brassicaceae-specific pathway parallel to the main auxin biosynthesis route Brassicaceae
NIT1-subfamily enzymes have role in production of IAA
genes crucial for biosynthesis of auxin have been identified auxin biosynthesis
tryptophan aminotransferase of arabidopsis 1 and YUCCA-type flavin monooxygenases (YUCCA3/5/7/8) constitute auxin biosynthesis pathway Arabidopsis thaliana
auxin biosynthesis has not been fully elucidated despite the pivotal role of auxin in plants Arabidopsis thaliana
tryptamine (TAM) pathway is major but redundant trp-dependent pathway for de novo biosynthesis of indole-3-acetic acid (IAA)
indole-3-pyruvic acid (IPA) pathway is major but redundant trp-dependent pathway for de novo biosynthesis of indole-3-acetic acid (IAA)
(YUC9, YUCCA9, AT1G04180) expression in jaz4-1 root apex samples shows reduction Arabidopsis thaliana
nitrilases role in production of IAA is not well-understood Arabidopsis thaliana
ethylene induces (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS1 TRANSPORT INHIBITOR RESPONSE2
(AAO2, AO3, AOgamma, atAO-2, AtAO3, AT3G43600) has role implicated in auxin biosynthesis Arabidopsis thaliana
Heatin inhibits nitrilase enzyme activity Arabidopsis thaliana
auxin is synthesized in green algae
auxin biosynthesis similarities and differences among organisms raise questions about origin of auxin biosynthesis
(TAR1, AT1G23320) expression in Mn1 endosperm at 20 and 28 DAP is approximately 50% less than (TAR1, AT1G23320) expression at 12 DAP Zea mays
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and (AtTAR2, TAR2, AT4G24670) ( -RELATED 2) expression in root meristematic region enhanced local production of IAA (Indole-3-acetic acid)
auxin is synthesized mainly in shoot apex
turnover of 6-heptenenitrile by recombinant (AtNIT2, NIT2, AT3G44300) was accordingly reduced by Heatin
(CKRC2, YUC8, YUCCA8, AT4G28720) gene is overexpressed in atbs4-D mutant Arabidopsis thaliana
(TAR1, AT1G23320) expression in Mn1 endosperm at 20 and 28 DAP is not concordant with much higher IAA levels at 28 DAP in Mn1 endosperm Zea mays
exogenous auxin treatment induced auxin biosynthesis gene expression Oryza sativa
IAAH encodes enzyme that catalyzes synthesis of indole-3-acetic acid (auxin)
YUCCA (YUC, YUC1, AT4G32540) family of flavin-containing monooxygenases convert indole-3-pyruvate to IAA
phosphorylation status of threonine residue acts as switch for TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) enzyme activity Arabidopsis thaliana
Heatin inhibition of NIT1-subfamily enzyme activity occurs in dose-response manner with estimated half-maximal inhibitory concentration (IC50) of 20.7 µm for (NIT1, AT4G08790)
YUCCA5 (SUPER1, YUC5, AT5G43890) is involved in production of auxin
YUCCA1 increases cellular free IAA levels Arabidopsis thaliana
three members of Brassicaceae-specific (NIT1, AT4G08790) -subfamily ( (AtNIT2, NIT2, AT3G44300) and (AtNIT3, NIT3, AT3G44320) ) were recovered as potential Heatin targets Arabidopsis thaliana
rise in IAA abundance probably contributes to Heatin-induced hypocotyl elongation Arabidopsis thaliana
nitrilase (NIT) is highly expressed during 17–21 DAF Brassica napus
SDG128 knockdown showed reduced transcription of ZmYUCCA7
Cyp79b mutants are nearly IAN-depleted IAN Arabidopsis thaliana
Nitrilases of the NIT1-subfamily have role in auxin biosynthesis
PHYTOCHROME INTERACTING FACTOR 4 (AtPIF4, PIF4, SRL2, AT2G43010) and (PIF7, AT5G61270) bind and activate promoters of TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) Arabidopsis thaliana
chemical genetics has been used for studies on auxin biosynthesis and functioning Arabidopsis thaliana
IAAH catalyzes hydrolysis of auxin precursor naphthaleneacetamide (NAM)
in vivo level of bioactive IAA significantly increased in presence of Heatin Arabidopsis thaliana
intermediate signaling components modulate the strength of auxin synthesis
histone methyltransferase SDG128 promotes transcription level and H3K4me3 level of ZmYUCCA8
ZmGID2 induced transcription level of ZmYUCCA8
(NIT1, AT4G08790) overexpression resulted in reduced total IAA and IAN levels
ZmGID2 induced transcription level of ZmYUCCA7
Heatin treatment results in significant accumulation of bioactive auxin (IAA) Arabidopsis thaliana
Heatin may in part affect elongation growth by interfering with aldehyde oxidation capacity
(YUC9, YUCCA9, AT1G04180) expression in jaz4-1 root apex shows significant repression compared with Col-0 Arabidopsis thaliana
NIT1-subfamily produces bioactive auxin (indole-3-acetic acid) Arabidopsis thaliana
(AVB1, IFL, IFL1, REV, AT5G60690) and (KAN, KAN1, AT5G16560) jointly regulate TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560)
auxin is synthesized in land plants
(ATFTA, FTA, PFT/PGGT-IALPHA, PLP, AT3G59380) binding is prevented by phosphorylation of active site threonine Arabidopsis thaliana
aluminum (Al) toxicity largely enhances expression of (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560)
auxin is synthesized via multiple biosynthetic routes
trp-dependent (T-D) pathway of indole-3-acetic acid (IAA) biosynthesis has been demonstrated in many plants
(YUC, YUC1, AT4G32540) developmental profile is qualitatively similar to previous report Zea mays
(YUC, YUC1, AT4G32540) temporal profile in Mn1 endosperm is not in agreement with IAA levels in Mn1 endosperm Zea mays
OsYUC1 and OsYUC4 play important roles in IAA biosynthesis via tryptophan-dependent pathway Oryza sativa
(YUC, YUC1, AT4G32540) flavin monooxygenases are associated with auxin metabolism
(AtJAZ4, JAZ4, TIFY6A, AT1G48500) positive regulation of auxin signaling in root apex likely occurs through induction of auxin biosynthesis Arabidopsis thaliana
(AVB1, IFL, IFL1, REV, AT5G60690) and (KAN, KAN1, AT5G16560) affects auxin production
WUSCHEL-RELATED HOMEOBOX5 (WOX5, WOX5B, AT3G11260) and PLETHORA (PLT) 1 and (PLT2, AT1G51190) promote endogenous auxin production Arabidopsis thaliana
(ALF1, HLS3, RTY, RTY1, SUR1, AT2G20610) mutant shows high-auxin phenotype
(AtYUC4, YUC4, AT5G11320) encodes flavin mono-oxygenase Arabidopsis thaliana
leaves of GS1a transgenic poplar display enhanced expression of α-subunit of anthranilate synthase (AMT1, ASA1, JDL1, TRP5, WEI2, AT5G05730) transcript Populus sp.
histone acetylation promotes IAA biosynthesis
(CYP79B2, AT4G39950) (CYP79B3, AT2G22330) double knockout mutant shows reduced amount of IAN (indole-3-acetonitrile)
auxin synthesis in the bud is under feedback control feedback control
YUCCA1 (YUC, YUC1, AT4G32540) encodes flavin mono-oxygenase Arabidopsis thaliana
ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1 (AMT1, ASA1, JDL1, TRP5, WEI2, AT5G05730) is directly controlled by (AtERF#092, ERF1, ERF1B, AT3G23240) Arabidopsis thaliana
(AtERF#092, ERF1, ERF1B, AT3G23240) and (AtPIF4, PIF4, SRL2, AT2G43010) regulate expression of (YUC, YUC1, AT4G32540) genes Arabidopsis thaliana
PHYTOCHROME INTERACTING FACTOR 4 (AtPIF4, PIF4, SRL2, AT2G43010) and (PIF7, AT5G61270) bind and activate promoters of (CYP79B2, AT4G39950) Arabidopsis thaliana
ethylene stimulates auxin biosynthetic pathway Arabidopsis thaliana
indole-3-acetaldoxime is an intermediate in auxin biosynthetic pathway Arabidopsis thaliana
in vivo levels of IAN and IAA were quantified in presence and absence of Heatin Arabidopsis thaliana
OsNF-YB1 directly regulates the expression of Os YUCCA11 Oryza sativa
future studies comparing auxin biosynthesis across kingdoms will shed light on role of auxin outside of the plant lineage
(AtYUC4, YUC4, AT5G11320) expression mediates auxin biosynthesis
mild nitrogen (N) deficiency promotes transcription of tryptophan aminotransferase 2 (AtTAR2, TAR2, AT4G24670) Arabidopsis thaliana
one-sided water availability stimulates locally confined auxin biosynthesis Arabidopsis thaliana
CLE/ (ATCLV1, CLV1, FAS3, FLO5, AT1G75820) system promotes auxin biosynthesis Physcomitrium
CYP79-catalyzed aldoximes are precursors for phenyl acetic acid (PAA)
free glutamine is correlated with IAA production in leaves of GS poplars Populus sp.; Nicotiana tabacum
auxin is synthesized in young expanding leaves of the apical bud
iaaM encodes tryptophan monoxidase
YUCCA family genes includes (AtYUC2, YUC2, AT4G13260) (YUC3, AT1G04610) (SUPER1, YUC5, AT5G43890) and (AtYUC6, YUC6, AT5G25620) Arabidopsis thaliana
auxin biosynthesis genes do not seem affected at transcript level by Heatin treatment Arabidopsis thaliana
CYP71A1 converts indole-3-acetaldoxime into IAN
over-expression of (ATTSB1, TRP2, TRPB, TSB1, AT5G54810) could rescue reduced IAA concentrations in cat2-1 mutant
prolonged auxin exposure down-regulates auxin biosynthetic gene transcription
wild-type plants show affected rate of auxin synthesis Arabidopsis thaliana
auxin biosynthetic pathway has remained unclear at gene level
tobacco leaves supplied with glutamine and chorismate showed significant differences in enhanced ASA α-subunit protein Nicotiana tabacum
enhanced growth in GS transgenic poplars is at least in part correlated with the role that glutamine plays in regulating IAA production Populus sp.
(AMI1, ATAMI1, ATTOC64-I, TOC64-I, AT1G08980) directly converts IAM to IAA
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) catalyses formation of indole pyruvic acid from tryptophan
isolation of IAM synthesis gene will complete auxin biosynthetic pathway
ethylene regulates auxin biosynthesis through activation of anthranilase synthase subunits
(AtSTY1, SRS1, STY1, AT3G51060) activates expression of (AtYUC4, YUC4, AT5G11320) Arabidopsis thaliana
aldehyde oxidase (AO) in plants catalyse synthesis of indole acetic acid
HDA6-dependent histone deacetylation represses YUCCA1 (YUC, YUC1, AT4G32540)
indole-3-acetamide (IAM) to indole-3-acetic acid (IAA) conversion is part of auxin biosynthesis pathway
(YUC9, YUCCA9, AT1G04180) expression in jaz4-1 differentiated root zone shows no significant change Arabidopsis thaliana
reduction of (TRP, AT3G56390) levels leads to decreased auxin production
SULFUREA (SULF) gene is involved in auxin biosynthesis Solanum lycopersicum
tryptophan-dependent pathway appears to be intact Solanum lycopersicum
(AtNIT3, NIT3, AT3G44320) gene shows down-regulation of ~2-fold in TM-4 after 6 h exposure to 250 μM As(III) Brassica juncea
auxin biosynthesis starts with tryptophan
shoot meristems are believed to synthesize auxin mainly via tryptophan-independent pathway Solanum lycopersicum
HDA6-dependent histone deacetylation represses (YUC7, AT2G33230)
auxin biosynthetic genes are differentially expressed in response to auxin
ethylene up-regulates auxin biosynthesis in the root apex
(SPT, AT4G36930) may promote auxin biosynthesis in gynoecial apex Arabidopsis thaliana
(AtNIT3, NIT3, AT3G44320) gene shows up-regulation of 2-fold in TPM-1 after 6 h exposure to 250 μM As(III) Brassica juncea
SUP bridges floral meristem determinacy and organogenesis through fine-tuning of auxin biosynthesis Arabidopsis thaliana
aluminum (Al) toxicity largely enhances expression of YUCCA genes
plants are able to synthesize IAA (indole-3-acetic acid)
Heatin application results in in vivo accumulation of bioactive IAA and its precursors IAN
cytochrome P450 (CYP79B2, AT4G39950) metabolizes l-tryptophan into indole-3-acetaldoxime
NIT1-subfamily enzymes may indirectly affect the response to Heatin
(AVB1, IFL, IFL1, REV, AT5G60690) and (KAN, KAN1, AT5G16560) jointly regulate YUCCA5 (SUPER1, YUC5, AT5G43890)
AGAMOUS (AG) synergistically activates expression of (AtYUC4, YUC4, AT5G11320)
AGAMOUS (AG) regulates expression of YUCCA4 (AtYUC4, YUC4, AT5G11320)
Barley RNAi lines and the complementation of cts-1 suggest a role for HvABCD proteins in IBA metabolism Hordeum vulgare; Arabidopsis thaliana
indole-3-acetamide (IAM) can be incorporated into plant cells
STYLISH (STY) genes may promote auxin biosynthesis Arabidopsis thaliana
ethylene stimulates auxin biosynthesis Arabidopsis thaliana
(SPT, AT4G36930) expression may be directly responding to auxin biosynthesis in developing gynoecia Arabidopsis thaliana
chorismate availability may be rate-limiting for IAA production in tobacco Nicotiana tabacum
SOSU1 mutant harbours suppressor mutation that conditions enhanced accumulation of auxin Solanum lycopersicum
(KAT2, PED1, PKT3, AT2G33150) mutant seedlings display IBA-resistant phenotype in root elongation assays Arabidopsis thaliana
two auxin biosynthesis pathways are non-redundant auxin synthesis Solanum lycopersicum
tryptophan-dependent pathway is functional Solanum lycopersicum
sequential hydrolysis of glucosinolates by myrosinases and nitrilases forms indole acetic acid
REVOLUTA (AVB1, IFL, IFL1, REV, AT5G60690) directly and positively regulates the expression of auxin biosynthesis genes Arabidopsis thaliana
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and (AtTAR2, TAR2, AT4G24670) genes of indole-3-pyruvic acid pathway activates auxin production Arabidopsis thaliana
ech2ibr1ibr3ibr10 quadruple mutants are defective in enzymes of the IBA-to-IAA conversion pathway Arabidopsis
auxin biosynthetic genes had decreased expression in (CRN, SOL2, AT5G13290) compared to WT Arabidopsis thaliana
brassinolide (BL) treatment increases auxin levels in root tip Arabidopsis thaliana
TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and YUCCA 8 (CKRC2, YUC8, YUCCA8, AT4G28720) increase indole-3-acetic acid (IAA) accumulation in root apex
yuc6-1D mutant has elevated free IAA levels Arabidopsis thaliana
tryptophan-independent biosynthesis of IAA in tomato first evidence provided by Epstein et al. (2002) Solanum lycopersicum
tryptamine applied in feeding experiments does not restore growth defect of sulfurea Solanum lycopersicum
action of 2-NOA and CHPAA might stimulate synthesis of endogenous auxin Nicotiana tabacum
β-oxidation mediates activation of signalling molecules including auxin indole acetic acid Zea mays
sulfurea mutant suffers from specific defect in tryptophan-independent auxin biosynthesis Solanum lycopersicum
cytokinin response regulator ARABIDOPSIS RESPONSE REGULATOR 1 (ARR1, RR1, AT3G16857) activates expression of auxin biosynthesis gene (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) Arabidopsis thaliana
low nitrogen deficiency activates (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (CKRC2, YUC8, YUCCA8, AT4G28720) auxin synthesis module Arabidopsis thaliana
IPA route is not required for R. fascians-triggered (CYCD3, CYCD3;1, AT4G34160) expression Arabidopsis thaliana
young seedlings are thought to rely on tryptophan-dependent auxin biosynthesis Solanum lycopersicum
auxin accumulation in root of Mt-RD64 plants may inhibit IAA synthesis in shoot Medicago truncatula
auxin deprivation stimulates synthesis of endogenous auxin Nicotiana tabacum
auxin synthesis deficiency is most probably due to block in tryptophan-independent indole-3-acetic acid (IAA) biosynthesis Solanum lycopersicum
indole applied in feeding experiments does not restore growth defect of sulfurea Solanum lycopersicum
external application of IAA promoted survival of sulfurea seedlings Solanum lycopersicum
ectopic expression of indole-3-acetic acid (IAA) synthesis from root-activated promoter might produce similar result to transient system for local and continuous delivery of IAA
up-regulation of (TSB2, AT4G27070) (BGLU37, TGG2, AT5G25980) and (AtNIT3, NIT3, AT3G44320) genes in TPM-1 was seen in TPM-1 after 6 h Brassica juncea
yuc6-1D activation mutant contains elevated levels of free IAA Arabidopsis thaliana
induction of the tryptophan-dependent pathway promoted survival of sulfurea seedlings Solanum lycopersicum
tryptophan conversion to IAA via tryptamine and indole-3-acetaldehyde takes place in cytosol
decreased expression of major auxin biosynthesis genes probably resulted in reduction of auxin in lateral root primordium initiation sites Arabidopsis thaliana
early LRPs without transported auxin might not have sufficient auxin synthesized by early LRPs for their continued development
conserved NADPH binding site of FMOs is required for YUCCA6 function in auxin biosynthesis Arabidopsis thaliana
(ATSCP2, SCP2, AT5G42890) would not be involved in binding or transfer of auxin precursors Arabidopsis thaliana
vtc2-5 tissues may exhibit an increased production of endogenous auxin Arabidopsis thaliana
sulfurea SAMs do not produce auxin Solanum lycopersicum
(CYP79B2, AT4G39950) (CYP79B3, AT2G22330) double knockout mutant has phenotype suggestive of low cellular auxin concentrations
auxin biosynthesis is highest in gametophore
histone acetylation indirectly upregulates (YUC, YUC1, AT4G32540) gene expression in protoplasts
presumptive pathways of auxin biosynthesis from tryptophan are summarized in this review
ethylene and ACC transcriptionally activate (ASB1, TRP4, WEI7, AT1G25220) (anthranilate synthase β1) Arabidopsis thaliana
(AtYUC4, YUC4, AT5G11320) is expressed in embryonic apical area after globular stages Arabidopsis thaliana
PIF-mediated (YUC, YUC1, AT4G32540) expression primarily occurs in cotyledons Arabidopsis thaliana
upregulation of CrTAA1 and CrYUC9 in crful-1 was abolished in crful-1 crind-1 ge double mutant Capsella rubella
(AtYUC4, YUC4, AT5G11320) mutant is allelic to YUCCA4 gene Arabidopsis thaliana
bin2-1 expression in outer tissues ( (ATMYB66, MYB66, WER, WER1, AT5G14750) pro and (ANAC070, BRN2, NAC070, AT4G10350) pro) blocks (YUC9, YUCCA9, AT1G04180) elevation in response to brassinolide (BL) Arabidopsis thaliana
bacterial cytokinins specifically target indole-3-pyruvic acid (IPA) pathway Arabidopsis thaliana
tryptamine (TAM) pathway is Trp-dependent pathway Arabidopsis thaliana
IPA pathway is specifically targeted by D188 infection Arabidopsis thaliana
(TRP, AT3G56390) is a precursor in auxin synthesis Zea mays
tryptophan-independent pathway localization is still unknown
YUCCA6 activation mutant yuc6-1D contains elevated free IAA level Arabidopsis thaliana
(YUC10, AT1G48910) gene expression is upregulated in roots of PtrXB38-OE plants Populus tremula × Populus alba
shoot meristem appears to be site of auxin biosynthesis Physcomitrella patens; Marchantia polymorpha
auxin biosynthetic inhibitors BBo and PPBo target IAA biosynthetic enzyme YUCCA in Arabidopsis Arabidopsis thaliana
excised single-layered LRPs should have synthesized auxin to maintain their own development
auxin biosynthesis involving TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (TAA) enzymes has previously been implicated in developmental responses including lateral root (LR) formation Arabidopsis thaliana
(ERF109, RRTF1, AT4G34410) directly binds to GCC-boxes in the promoters of (AMT1, ASA1, JDL1, TRP5, WEI2, AT5G05730) and (AtYUC2, YUC2, AT4G13260) Arabidopsis thaliana
cytokinin perception induces expression of (YUC, YUC1, AT4G32540)
YUC6ox line had IAA levels up-regulated in the shoot Arabidopsis thaliana
auxin biosynthesis in meristems is affected in sulfurea mutant Solanum lycopersicum
YUCCA (YUC, YUC1, AT4G32540) catalyse final rate-limiting step in primary IAA biosynthetic pathway
accumulated IAOx in (ATR4, CYP83B1, RED1, RNT1, SUR2, AT4G31500) mutants is channeled to sub-pathways (1-1) or (1-2) Arabidopsis thaliana
(CYP79B2, AT4G39950) is responsible for diverting tryptophan into IAA production Arabidopsis thaliana
(AtYUC2, YUC2, AT4G13260) synthesizes auxin Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) participate in induction of auxin synthesis by methyl jasmonate (MeJA) Arabidopsis thaliana
BL treatment especially in hypocotyls, petioles, and cotyledons Arabidopsis thaliana
peroxisomes house β-oxidation of indole-3-butyric acid (IBA) plants
ethylene treatment with Ethrel causes slight increase and expression of auxin (indole acetic acid; IAA) biosynthetic genes
physiological importance of IBA-derived IAA has been demonstrated conclusively in Arabidopsis by elegant genetic analysis Arabidopsis thaliana
barley RNAi lines with suppression of HvABCD1 and HvABCD2 indicated roles in metabolism of indole butyric acid (IBA) Hordeum vulgare
root tip cells have capacity to synthesize auxin locally Arabidopsis thaliana
YUCCA family members show that local auxin synthesis is important and that YUCCA family members have unique as well as overlapping functions Arabidopsis thaliana
wounding induces tryptophan-dependent pathway Solanum lycopersicum
YUCCA flavin monooxygenase is key enzyme in the auxin synthesis pathway Arabidopsis thaliana
YUCCA is required for rapid increase in auxin levels after low R:FR treatment Arabidopsis thaliana
TRYPTOPHANE AMINOTRANSFERASE OF ARABIDOPSIS1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) encodes auxin-biosynthesis enzyme Arabidopsis thaliana
YUCCA family consists of 11 genes divided into five clades Capsella rubella
yuc1D mutants show enhanced auxin levels due to increased expression of YUCCA1 Arabidopsis thaliana
photosynthetic sucrose acts as long-distance signal carrier regulating local tryptophan-based biosynthesis of auxin Arabidopsis thaliana
expression levels of these genes did not change in DEX- or mock-treated EV7 seedlings Arabidopsis thaliana
disruption of auxin transport by down-regulating (112A-2A, EMB30, GN, GNOM, MIZ2, VAN7, AT1G13980) expression shows that auxin transport may sensitively affect auxin synthesis by an unknown pathway
significantly decreased expression of key genes for local auxin biosynthesis implies local auxin synthesis is probably decreased
ibr1ibr3ibr10 mutants are defective in enzymes of the IBA-to-IAA conversion pathway Arabidopsis
flavin monooxygenases YUCCA (YUC, YUC1, AT4G32540) family catalyzes step in indole-3-acetic acid (IAA) production from L-tryptophan
auxin biosynthetic pathway is not fully understood at the biochemical level
L-Kynurenine and Yucasin treatment led to fruits with strongly reduced shoulder indices Capsella rubella
local auxin biosynthesis is recognized as important throughout plant development
iaaM coding sequence is fused with CrIND promoter
indole-3-acetaldoxime (IAOx) pathway is improbable to be principally indole-3-acetic acid (IAA) biosynthesis pathway Arabidopsis thaliana
multiple pathways for auxin biosynthesis is supported by genetic evidence Arabidopsis thaliana
YUCCA1 gene is believed to be directly involved in tryptophan-dependent IAA biosynthesis via the IPyA pathway Arabidopsis thaliana
auxin concentration in high R/FR was normal in pif4pif5 Arabidopsis thaliana
indolacetic acid biosynthesis genes were downregulated upon ARR1ΔDDK induction Arabidopsis thaliana
indole-3-acetic acid (IAA) is most abundant endogenous auxin
plants with reduced BR levels are resistant to critical loss of auxin biosynthesis Arabidopsis thaliana
YUCCA (YUC, YUC1, AT4G32540) catalyzes step in indole-3-acetic acid (IAA) production from L-tryptophan
(BEL1, AT5G41410) transcription factors targets YUCCA1a
HD-ZIP III transcription factors control the expression of auxin biosynthesis genes
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and (CYP79B2, AT4G39950) code for auxin biosynthetic enzymes
repression of (ATMYC2, JAI1, JIN1, MYC2, RD22BP1, ZBF1, AT1G32640) synthesis relieves inhibition of IAA synthesis Arabidopsis thaliana
suspensor cells are known to synthesize IAA Arabidopsis thaliana
JA triggers substrate production for subsequent auxin synthesis Arabidopsis thaliana
activated sub-pathways of auxin biosynthesis increased auxin pool Arabidopsis thaliana
(PEX6, AT1G03000) mutants display response to a peroxisomally metabolized auxin precursor Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) has (A-PUT2, bHLHb1, PIF5, PIL6, AT3G59060) binding sites in promoter
relief of inhibition of IAA synthesis increases cellular IAA Arabidopsis thaliana
JA induces formation of indole-3-acetic acid (IAA) by direct induction of IAA synthesis-related genes Arabidopsis thaliana
BL-triggered increase of endogenous IAA levels in roots is likely due to induction in auxin biosynthetic genes Arabidopsis thaliana
enhanced IAOX pathway in (AtSAM2, MAT2, SAM-2, SAM2, AT4G01850) was mainly used in biosynthesis of hydroxyl-GS rather than IAA Brassica napus
auxins are synthesized by achenes Fragaria × ananassa
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) mutant seedlings are deficient in biosynthetic enzyme (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) required for the rapid increase in free IAA levels after simulated shade perception Arabidopsis thaliana
local auxin synthesis maintains stability of auxin concentration gradient
(YUC9, YUCCA9, AT1G04180) increased its expression only under low R:FR conditions but not in response to low irradiance Arabidopsis thaliana
vitamin B6 in its form as pyridoxal-5-phosphate (PLP) is required as cofactor for auxin biosynthesis Arabidopsis thaliana
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) mutant is deficient for shade-induced increase in auxin biosynthesis Arabidopsis thaliana
disruption of auxin transport by down-regulating (112A-2A, EMB30, GN, GNOM, MIZ2, VAN7, AT1G13980) expression decreased expression level of auxin biosynthesis genes
MAP kinase signaling regulates conversion of auxin precursors to active auxin
(A-PUT2, bHLHb1, PIF5, PIL6, AT3G59060) is responsible for shade-induced (YUC, YUC1, AT4G32540) expression Arabidopsis thaliana
shade stimulus increases level of auxin Arabidopsis thaliana
MeJA application triggers increase in indole-3-acetic acid (IAA) levels Arabidopsis thaliana
BL treatment induced ASB1pro:GUS expression in hypocotyls and petioles Arabidopsis thaliana
expression of auxin biosynthetic genes was induced more obviously in hypocotyl Arabidopsis thaliana
levels of IAM in gul1 / sur2-7 were reduced in mutant Arabidopsis thaliana
(SUPER1, YUC5, AT5G43890) is auxin biosynthesis gene Gossypium hirsutum
(AtYUC4, YUC4, AT5G11320) is specifically expressed in suspensor Arabidopsis thaliana
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) is expressed in most apical cells of 16-cell stage proembryos Arabidopsis thaliana
lower levels of IAA conjugates and catabolites indicate that IAA biosynthesis is downregulated in wox135 mutant Arabidopsis thaliana
auxin signaling pathway under low phosphorus (P) requires TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) for auxin synthesis
induction of (AtNIT2, NIT2, AT3G44300) expression was strongly reduced upon infection of (AHK3, HK3, ROCK3, AT1G27320) (AHK4, ATCRE1, CRE1, WOL, WOL1, AT2G01830) mutant
IAA biosynthesis occurs via Trp-independent pathways
(AMT1, ASA1, JDL1, TRP5, WEI2, AT5G05730) (ASB1, TRP4, WEI7, AT1G25220) (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (TAR1, AT1G23320) (AtTAR2, TAR2, AT4G24670) (YUC, YUC1, AT4G32540) and (AtYUC6, YUC6, AT5G25620) expression is downregulated in tic-2 roots
spl-D (SPOROCYTELESS dominant) mutant suppresses expression of auxin synthesis genes (AtYUC2, YUC2, AT4G13260) and (AtYUC6, YUC6, AT5G25620) Arabidopsis thaliana
stunted root growth of (ATPDX1, ATPDX1.3, PDX1, PDX1.3, RSR4, AT5G01410) mutant results from impairment in local auxin production Arabidopsis thaliana
(AtYUC2, YUC2, AT4G13260) is one of (YUC, YUC1, AT4G32540) genes up-regulated in shade Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) is involved in auxin biosynthesis Oryza sativa
4-phenoxyphenylboronic acid (PPBo) specifically inhibits YUCCA family (YUC, YUC1, AT4G32540)
4-phenoxyphenylboronic acid (PPBo) specifically inhibits (YUC, YUC1, AT4G32540) activity
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) catalyzes formation of indole-3-pyruvic acid (IPA) Arabidopsis thaliana
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and (AtTAR2, TAR2, AT4G24670) function in auxin biosynthesis
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) mutants display auxin-related phenotypes Arabidopsis thaliana
root hair transcriptome data identified induction of Tryptophan Amino-transferase Related (LjTar1) auxin biosynthesis gene Lotus japonicus
IPyA was more abundant in 'Akatsuki' than in 'Manami' at S2 Prunus persica
IPyA was not altered between S3 and S4 in 'Manami' Prunus persica
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1) is involved in IAA biosynthesis Arabidopsis thaliana
TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) is expressed in discrete and dynamic patterns during development Arabidopsis thaliana
purified (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (P166S) mutant form shows no detectable aminotransferase activity Arabidopsis thaliana
(CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) is whole-gene translational fusion with GFP
LEAFY COTYLEDON2 (AtLEC2, LEC2, AT1G28300) can directly regulate TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) Arabidopsis thaliana
(YUC, YUC1, AT4G32540) auxin biosynthetic genes are expressed at base of young embryos Arabidopsis thaliana
CrIND activates expression of auxin biosynthesis genes Capsella rubella
sucrose (Suc) feeding to cotyledon-excised seedlings reversed effect of excision Arabidopsis thaliana
YUC6ox line had IPyA levels not significantly different from wild-type Arabidopsis thaliana
YUCCA4, YUCCA6, YUCCA7, and (YUC9, YUCCA9, AT1G04180) are repressed in ren1-D mutant roots Oryza sativa
(AtYUC4, YUC4, AT5G11320) responded to shade in RNA-seq analysis Arabidopsis thaliana
(AtYUC2, YUC2, AT4G13260) (YUC3, AT1G04610) (AtYUC4, YUC4, AT5G11320) and (SUPER1, YUC5, AT5G43890) had no clear shade response observed by RT-qPCR analysis Arabidopsis thaliana
redox-sensitive transcription factors TCPs regulate (YUC, YUC1, AT4G32540) expression and auxin biosynthesis
ethylene induces (ASB1, TRP4, WEI7, AT1G25220)
CVP2-driven expression of YUCCA1 could not rescue bri 3 mutants Arabidopsis thaliana
yuc1D is auxin biosynthesis mutant Arabidopsis thaliana
YUCCA family members act downstream of (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560)
onset of (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (YUC, YUC1, AT4G32540) expression at proembryo apex is reflected by new focus of auxin production at proembryo apex Arabidopsis thaliana
UV-B inhibited accumulation of (CKRC2, YUC8, YUCCA8, AT4G28720) and (IAA29, AT4G32280) transcript abundance at both temperatures Arabidopsis thaliana
(AtRLP10, CLV2, AT1G65380) (CRN, SOL2, AT5G13290) are not critically required for TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) -mediated conversion of tryptophan to indole-3-pyruvate (IPA) Arabidopsis thaliana
indole-3-pyruvic acid (IPyA) tryptophan-dependent pathway plays important developmental roles in embryogenesis Arabidopsis thaliana
(YUC, YUC1, AT4G32540) is expressed in embryonic apical area after globular stages Arabidopsis thaliana
tryptophan aminotransferases family (e.g., TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) ) catalyzes step in indole-3-acetic acid (IAA) production from L-tryptophan
indole-3-butyric acid (IBA) production is widely distributed among fungi
TAA1-GFP translational reporter shows upregulated protein levels in root apices under low nitrogen Arabidopsis thaliana
low nitrogen deficiency induces (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) (CKRC2, YUC8, YUCCA8, AT4G28720) auxin synthesis module in root apical meristem Arabidopsis thaliana
main auxin biosynthesis pathway in Arabidopsis is indole-3-pyruvic acid (IPA) pathway Arabidopsis thaliana
(CYP79B2, AT4G39950) transcription is upregulated upon D188 infection Arabidopsis thaliana
shoot tissues of TAA1ox line showed an increase in the levels of the IAA precursors TRA and IAAld Arabidopsis thaliana
(YUC3, AT1G04610) is specifically expressed in suspensor Arabidopsis thaliana
(AtPIF4, PIF4, SRL2, AT2G43010) directly activates expression of (CKRC2, YUC8, YUCCA8, AT4G28720)
TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) cooperates with indole-3-pyruvic acid (IPyA)-converting enzyme YUCCA 8 (CKRC2, YUC8, YUCCA8, AT4G28720)
bacterial cytokinins stimulate auxin biosynthesis Arabidopsis thaliana
(CYP71A13, AT2G30770) transcription is upregulated upon D188 infection Arabidopsis thaliana
indole-3-pyruvic acid (IPA) pathway consists of (TRP, AT3G56390) AMINOTRANSFERASE RELATED proteins (TAR1, AT1G23320) and (AtTAR2, TAR2, AT4G24670) Arabidopsis thaliana
(YUC, YUC1, AT4G32540) genes code for enzymes that control a rate-limiting step in auxin biosynthesis
transcriptional activation of IAA biosynthetic pathway in (AHB2, ARATH GLB2, ATGLB2, GLB2, HB2, NSHB2, PGB2, AT3G10520) −/− line is accompanied by increased endogenous levels of IAA Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) gene expression demonstrates partial functional overlap between the two genes Arabidopsis thaliana
inhibition of auxin biosynthesis affects development of wild-type fruits Capsella rubella
(YUC, YUC1, AT4G32540) mutant is allelic to YUCCA1 gene Arabidopsis thaliana
brassinolide (BL) elevates auxin biosynthesis in epidermis Arabidopsis thaliana
indole pyruvate (IPA) route biosynthesis genes were transcriptionally activated in infected tissues
(PRS, PRS1, WOX3, AT2G28610) promotes auxin biosynthesis Arabidopsis thaliana
Four Trp-dependent pathways may contribute to auxin production in Arabidopsis Arabidopsis thaliana
IAA biosynthesis occurs via tryptophan (Trp) precursor pathway
TAA1ox line showed increase in IPyA and IAA levels in both root and shoot tissues Arabidopsis thaliana
MeJA treatment promotes production of auxin Arabidopsis thaliana
spi1 is homolog of AtYUC Zea mays; Arabidopsis thaliana
auxin biosynthesis gene (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) affects auxin accumulation Arabidopsis thaliana
PpYUC11 was highly expressed in ripening 'Akatsuki' fruit Prunus persica
tryptamine pathway is Trp-dependent auxin biosynthetic pathway Arabidopsis thaliana
L-tryptophan (L-Trp) is the preferred physiological substrate of TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) Arabidopsis thaliana
(YUC9, YUCCA9, AT1G04180) is involved in auxin biosynthesis Arabidopsis thaliana
(ALF1, HLS3, RTY, RTY1, SUR1, AT2G20610) rooty mutant contains IAA contents five- to 20-fold higher than wild type Arabidopsis thaliana
YUCCA genes encode flavin-containing monooxygenases (FMOs) Arabidopsis thaliana
indole-3-acetic acid (IAA) is produced in several tissues of the root meristem
l-kynurenine (Kyn) inhibits auxin biosynthesis Arabidopsis thaliana
indole-3-acidic acid (IAA) biosynthesis and concentration site coincides with expression site of TRYPTOPHAN AMINOTRANSFERASE 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) and YUCCA (YUC, YUC1, AT4G32540) enzymes Arabidopsis thaliana
Rhodococcus fascians produces auxin via indole-3-pyruvic acid (IPA) pathway Rhodococcus fascians
indole-3-acetic acid (IAA) is derived from tryptophan Brassica napus
STYLISH and NGATHA (NGA) transcription factors promote expression of YUCCA4 Arabidopsis thaliana
SNP (nitric oxide donor) represses expression of TRYPTOPHAN AMINOTRANSFERASE RELATED 1 (TAR1, AT1G23320) Arabidopsis thaliana
GO enrichment analysis identified auxin biosynthesis functions Zea mays
PHYTOCHROME INTERACTING FACTOR 4 (AtPIF4, PIF4, SRL2, AT2G43010) promotes auxin biosynthesis
SNP (nitric oxide donor) inhibits TAA enzymatic activity Arabidopsis thaliana
transposon insertion in 5′-flanking region of PpYUC11 is related to suppression of PpYUC11 induction at late-ripening stage Prunus persica
indole-3-acetaldoxime (IAOx) pathway is Trp-dependent auxin biosynthetic pathway Arabidopsis thaliana
local auxin production plays role in plant growth and development Arabidopsis thaliana
IPA-dependent route is parallel to IAOx-dependent route
TRYPTOPHAN AMINOTRANSFERASE RELATED 2 (AtTAR2, TAR2, AT4G24670) has expression pattern in root tissues
WOX genes regulate auxin biosynthesis Arabidopsis thaliana
production of indole-3-acetic acid (IAA) mediated by overexpression of YUCCA (YUC, YUC1, AT4G32540) genes in the shoot could not rescue auxin deficiency symptoms in the root of YUC-defective mutants Arabidopsis thaliana
auxin concentration changes can be achieved by modulating the indole-3-pyruvate (IPA) pathway or other auxin sources/sinks in the root tip Arabidopsis thaliana
biosynthesis of indole-3-acetic acid (IAA) via indole-3-acetamide (IAM) is possibly not biologically relevant Brassicaceae
indole-3-pyruvic acid (IPA) pathway consists of (TRP, AT3G56390) AMINOTRANSFERASE 1/WEAK ETHYLENE INSENSITIVE 8 ( (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) ) Arabidopsis thaliana
impaired development of symptoms is caused by defective plant IPA pathway Arabidopsis thaliana
(AtYUC2, YUC2, AT4G13260) expression gradually increases with declining red/far-red ratio Arabidopsis thaliana
high expression of (YUC, YUC1, AT4G32540) genes results in increased auxin levels Arabidopsis thaliana
shoot excision caused decrease in TRYPTOPHAN AMINOTRANSFERASE 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) accumulation Arabidopsis thaliana
(CKRC2, YUC8, YUCCA8, AT4G28720) (YUCCA 8) GFP-derived fluorescence increases under low nitrogen deficiency Arabidopsis thaliana
(CYP79B2, AT4G39950) /B3 orthologs are not found outside Brassicaceae
(AMI1, ATAMI1, ATTOC64-I, TOC64-I, AT1G08980) expression pattern is comparable in all samples Arabidopsis thaliana
trp-dependent (T-D) pathway is the predominant route in developing kernels of maize Zea mays
fishbone mutant showed diverse serious phenotypes due to defective auxin biosynthesis Oryza sativa
TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) was downregulated upon ARR1ΔDDK induction Arabidopsis thaliana
bacterial auxin biosynthesis gene iaaM expression under CrIND promoter leads to shoulders extended further than wild-type Capsella rubella
indole-3-acetaldoxime (IAOx) can be directed to biosynthesis of indole-3-acetic acid (IAA) via indole-3-acetamide (IAM) Brassicaceae
YUCCA proteins catalyse synthesis of indole-3-acetic acid (IAA) Arabidopsis thaliana
(YUC, YUC1, AT4G32540) and TAA genes showed higher expression in lines combining IBA metabolism and IAA-conjugate hydrolase mutations Arabidopsis thaliana
higher expression of (YUC, YUC1, AT4G32540) and TAA genes indicates increase in this main biosynthetic pathway Arabidopsis thaliana
YUCCA (YUC, YUC1, AT4G32540) transforms indole-3-pyruvic acid into IAA Arabidopsis thaliana
mesophyll/epidermis appeared to be a major site of shade-induced auxin biosynthesis Arabidopsis thaliana
NMO could be converted to auxin
tryptophan-dependent auxin biosynthesis pathway is major route of auxin biosynthesis
wild-type (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) catalyzes conversion of tryptophan to indole-3-pyruvate Arabidopsis thaliana
(TRP, AT3G56390) biosynthetic enzyme genes upregulation copes with heightened demand for auxin precursors
(YUC, YUC1, AT4G32540) genes expression in gynoeciums suggests role in auxin production in formation of auxin gradient
PC interdigitation is compromised in leaves deficient in auxin biosynthesis Arabidopsis thaliana
IAA content is higher in PtrXB38-OE plants than in control plants Populus tremula × Populus alba
ethylene stimulates auxin biosynthesis
ARABIDOPSIS RESPONSE REGULATOR 1 (ARR1, RR1, AT3G16857) in the transition zone (TZ) regulates auxin production Arabidopsis thaliana
(ERF109, RRTF1, AT4G34410) regulates lateral root formation
(CKRC2, YUC8, YUCCA8, AT4G28720) and (YUC9, YUCCA9, AT1G04180) are probably not the only components of auxin formation downstream of (AMT1, ASA1, JDL1, TRP5, WEI2, AT5G05730) Arabidopsis thaliana
indole-3-acetic acid (IAA) is biosynthesized from tryptophan
yucasin may be specific to IAA-producing (YUC, YUC1, AT4G32540) enzyme(s) Arabidopsis thaliana
yucasin blocks indole-3-acetic acid (IAA) production Coffea canephora
differentially localized auxin synthase isoforms YUCCA4 (AtYUC4, YUC4, AT5G11320) are parallelized by individual gene products of the (YUC, YUC1, AT4G32540) family in Arabidopsis Arabidopsis thaliana
Pseudarthrobacter sp. NIBRBAC000502770 was found to produce high amount of indole acetic acid
auxin levels and responses are regulated via biosynthesis
four (YUC, YUC1, AT4G32540) genes expression is rapidly induced in a PIF-dependent manner Arabidopsis thaliana
members of (CKRC1, SAV3, TAA1, TIR2, WEI8, AT1G70560) /TAR family only TAA1 showed higher expression in shoulders relative to base Capsella rubella
indole-3-pyruvic acid (IPA) pathway catalyzes conversion of L-tryptophan (Trp) into indole-3-acidic acid (IAA) Arabidopsis thaliana
(CYP71A13, AT2G30770) transcription is upregulated upon D188-5 infection Arabidopsis thaliana
(AtNIT2, NIT2, AT3G44300) could be a target of both microbe-associated molecular patterns (MAMPs) and cytokinins
auxin synthesis genes are expressed in mature gametangia Physcomitrella patens
mn1 kernels are highly deficient for indole-acetic acid (IAA) Zea mays
(TAR1, AT1G23320) expression was altered in developing endosperm of mn1 mutant Zea mays